NNAACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTGAAATTACAAAGTATTGATCATTCCCACTTAAACACAAGG
TTCTTAAGAGATGCTTATGCCCTGAATGCCATAATGTTCCAGGAATATCA
GAGCTCTGAGATGCAGACCTGAGAGTTCCTATCTTAAATCATTGACGTCT
ATCTTTTTTGACGAACATGGAAGCAAAATGCAAATATTGCATTAGAAGCA
TGAAATTAACATGACATATTTAGCTTTTAAAATGGGGATATAAAGCAACT
AAGATGGTATAGTTTTAAGACACAGTATCTTAATAAGAGCTAAGCAGAAA
TAATATTACCACGAGTAAAATGAAATGCTATTTTTTTCCACCTTGGTTAC
CACCTAAACATAGAGGAAAGATCCTGTCACTGAAGATACCACATATTTCA
GATATGGGACTTTGGAGAACGAAGTTGGAAATAGCTTGGAAGACTCCTCC
CTGAAAAATAGCTCTCATAATATCTGAAGGGGCTACACCAACTGCCAAGA
AAAATAAAAACAAAAACAAAATAAACAAATAACATTCAATGGTTCTTTCT
AGCTGTAAAGCATACAATCCACAATGACCAGCCTAGTTGGTTATGCAAGG
ATATAATAGTAGCCATTGGATGTTAGGGATAACAAATATCTGTCTAGTTG
AACAAAGGACTGCTCAATAGTAGGGCCTCGTGTATGGTATTCCAAAT

CGATGCAGNTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTTTCCCCCCATTTTGCACCTTGAG
AACTGCTACTTAGTGGCTTGCTCACTGAATATGTAGATATAGGCGAGCAA
GCATTGGGGATTCATTGGCTTTTGTTTGCAGAGCTTTCCACTTGCTAGTA
AGCAAAGAGATTACAGATTTCTGTTCCCTTCAGCACTCAGGAGACTCAAC
ACCAAACAGGGTCTGCAGTACTGAGCAGCTTTGTATTTAATCTCTTGTAA
AATCCATGGGAAAACAATTGAGGAGTGCATGATCAAGATGTATATTACAA
ATTAAAGGTGAGTTAAAGGAATCAATGAAAACTTCATGTATAAAAGTTAT
CAGTACAGCAATGGCATGTATATACATAAAGCATAAGTAATAAATTAAGG
AAGAGAAAAGAAAAGGTATAATAGAAATTGGAATTAATAAACAGAAAGCT
ATTTGCTCAAAAGAGGTAGGGAAGGAGAAAAAAATAGTAGCATGTCTTAC
AGTTTAAAATGCATATTTATTAGAAATCAACTAAACAGAATATTCACAGT
TACAGAAGAAATTAATTGGTTTAAATTATGATACGTTATTGTTTTCTATT
TAAGTACAAATACTGAATAAAATAGAATTTCTAAGAGGAAATAAATAGCA
AAAGGTGAACTCAGACAAGATATATGATCATGTAAGAAATGAGTCTTCCC
N

Query= MSMg01no539_e21.b1 MSMg01no539_e21.b1 CHROMAT_FILE:
MSMg01no539_e21.b1 PHD_FILE: MSMg01no539_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:12 2005
         (698 letters)



>mm_chr8_39559142_39560239
          Length = 1098

 Score = 1313 bits (679), Expect = 0.0
 Identities = 679/679 (100%)
 Strand = Plus / Plus

                                                                       
Query: 20  aaagtattgatcattcccacttaaacacaaggttcttaagagatgcttatgccctgaatg 79
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aaagtattgatcattcccacttaaacacaaggttcttaagagatgcttatgccctgaatg 279

                                                                       
Query: 80  ccataatgttccaggaatatcagagctctgagatgcagacctgagagttcctatcttaaa 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ccataatgttccaggaatatcagagctctgagatgcagacctgagagttcctatcttaaa 339

                                                                       
Query: 140 tcattgacgtctatcttttttgacgaacatggaagcaaaatgcaaatattgcattagaag 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tcattgacgtctatcttttttgacgaacatggaagcaaaatgcaaatattgcattagaag 399

                                                                       
Query: 200 catgaaattaacatgacatatttagcttttaaaatggggatataaagcaactaagatggt 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 catgaaattaacatgacatatttagcttttaaaatggggatataaagcaactaagatggt 459

                                                                       
Query: 260 atagttttaagacacagtatcttaataagagctaagcagaaataatattaccacgagtaa 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atagttttaagacacagtatcttaataagagctaagcagaaataatattaccacgagtaa 519

                                                                       
Query: 320 aatgaaatgctatttttttccaccttggttaccacctaaacatagaggaaagatcctgtc 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aatgaaatgctatttttttccaccttggttaccacctaaacatagaggaaagatcctgtc 579

                                                                       
Query: 380 actgaagataccacatatttcagatatgggactttggagaacgaagttggaaatagcttg 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 actgaagataccacatatttcagatatgggactttggagaacgaagttggaaatagcttg 639

                                                                       
Query: 440 gaagactcctccctgaaaaatagctctcataatatctgaaggggctacaccaactgccaa 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gaagactcctccctgaaaaatagctctcataatatctgaaggggctacaccaactgccaa 699

                                                                       
Query: 500 gaaaaataaaaacaaaaacaaaataaacaaataacattcaatggttctttctagctgtaa 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gaaaaataaaaacaaaaacaaaataaacaaataacattcaatggttctttctagctgtaa 759

                                                                       
Query: 560 agcatacaatccacaatgaccagcctagttggttatgcaaggatataatagtagccattg 619
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 agcatacaatccacaatgaccagcctagttggttatgcaaggatataatagtagccattg 819

                                                                       
Query: 620 gatgttagggataacaaatatctgtctagttgaacaaaggactgctcaatagtagggcct 679
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 gatgttagggataacaaatatctgtctagttgaacaaaggactgctcaatagtagggcct 879

                              
Query: 680 cgtgtatggtattccaaat 698
           |||||||||||||||||||
Sbjct: 880 cgtgtatggtattccaaat 898


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space:   748544
Effective search space used:   748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no539_e21.g1 MSMg01no539_e21.g1 CHROMAT_FILE:
MSMg01no539_e21.g1 PHD_FILE: MSMg01no539_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:13 2005
         (568 letters)



>mm_chr8_39608098_39609065
          Length = 968

 Score = 1098 bits (568), Expect = 0.0
 Identities = 568/568 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcttttgtttgcagagctttccacttgctagtaagcaaagagattacagatttctgttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gcttttgtttgcagagctttccacttgctagtaagcaaagagattacagatttctgttcc 709

                                                                       
Query: 61  cttcagcactcaggagactcaacaccaaacagggtctgcagtactgagcagctttgtatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cttcagcactcaggagactcaacaccaaacagggtctgcagtactgagcagctttgtatt 649

                                                                       
Query: 121 taatctcttgtaaaatccatgggaaaacaattgaggagtgcatgatcaagatgtatatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 taatctcttgtaaaatccatgggaaaacaattgaggagtgcatgatcaagatgtatatta 589

                                                                       
Query: 181 caaattaaaggtgagttaaaggaatcaatgaaaacttcatgtataaaagttatcagtaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 caaattaaaggtgagttaaaggaatcaatgaaaacttcatgtataaaagttatcagtaca 529

                                                                       
Query: 241 gcaatggcatgtatatacataaagcataagtaataaattaaggaagagaaaagaaaaggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gcaatggcatgtatatacataaagcataagtaataaattaaggaagagaaaagaaaaggt 469

                                                                       
Query: 301 ataatagaaattggaattaataaacagaaagctatttgctcaaaagaggtagggaaggag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ataatagaaattggaattaataaacagaaagctatttgctcaaaagaggtagggaaggag 409

                                                                       
Query: 361 aaaaaaatagtagcatgtcttacagtttaaaatgcatatttattagaaatcaactaaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aaaaaaatagtagcatgtcttacagtttaaaatgcatatttattagaaatcaactaaaca 349

                                                                       
Query: 421 gaatattcacagttacagaagaaattaattggtttaaattatgatacgttattgttttct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gaatattcacagttacagaagaaattaattggtttaaattatgatacgttattgttttct 289

                                                                       
Query: 481 atttaagtacaaatactgaataaaatagaatttctaagaggaaataaatagcaaaaggtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atttaagtacaaatactgaataaaatagaatttctaagaggaaataaatagcaaaaggtg 229

                                       
Query: 541 aactcagacaagatatatgatcatgtaa 568
           ||||||||||||||||||||||||||||
Sbjct: 228 aactcagacaagatatatgatcatgtaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space:   534564
Effective search space used:   534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)