Query= MSMg01no539_l18.b1 MSMg01no539_l18.b1 CHROMAT_FILE:
MSMg01no539_l18.b1 PHD_FILE: MSMg01no539_l18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:47 2005
(634 letters)
>mm_chr8_63978802_63979834
Length = 1033
Score = 1093 bits (565), Expect = 0.0
Identities = 614/631 (97%), Gaps = 3/631 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgattttcctttcttttgtaagttaaaaatatttgaggatgttcatgagtac 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgatttt--tttcttttgtaagttaaaaatatttgaggatgttcatgagtac 262
Query: 65 tgtatttacatcattcctatcccccccc-aactcctcctgcttctccctctacttcctct 123
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 263 tgtatttacatcattcctaccccccccccaactcctcctgcttctccctctacttcctct 322
Query: 124 gcattttatggtctcttctccagttattttggaccagtacatgtgttgtgcatgcacagc 183
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 323 ccattttatggtctcttctccagttattttggaccggtacatgtgttgtgcatgcacagc 382
Query: 184 agcctgccgagtcctttagtgtggcttgtatgagtttgtagttagggccgactgcgtggg 243
||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 383 agcctgctgagtcctttagtgtggcttgtatgagtttgtaattagggccgactgtgtggg 442
Query: 244 actgggtcactgtcacagctcgtccctggaggagactgattctccttttctcagcagcct 303
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 actggatcactgtcgcagctcgtccctggaggagactgattctccttttctcagcagcct 502
Query: 304 ttaactgctcgcagctcttcatctcggggtcaggccttgtgaatctcccatccaagctgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttaactgctcgcagctcttcatctcggggtcaggccttgtgaatctcccatccaagctgc 562
Query: 364 tggtcactgtgcagggcttgtttgggtggccacagtgttgacatttcatgggtgcaactt 423
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgatcactgtgcagggcttgtttaggtggccacagtgttgacatttcatgggtgcaactt 622
Query: 424 ccccatcctatgcagagagagcctatgtcatagcagatactctggtcctctgacggcagt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ccccatcctatgcagagagagcctatgtcatagcagatactctggtcctctgacggcagt 682
Query: 484 cttcatgtcacgtctgcagtgttccctgagcctttggctagggattgtaacatgaagttt 543
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 683 cttcatgtcatgtctgcagtgttccctgagcctttggctagggattgtaatatgaagttt 742
Query: 544 ttagtattgacattaattattttatttaacttaacttttataacctgaagtgattatagg 603
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 743 ttagtattgacattaattattgtatgtaacttaacttttataacctgaagtgattatagg 802
Query: 604 gtttattctgtctggggcatccttgaaaaca 634
|||||||||||||||||||||||||||||||
Sbjct: 803 gtttattctgtctggggcatccttgaaaaca 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1033
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1023
Effective search space: 638352
Effective search space used: 638352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_l18.g1 MSMg01no539_l18.g1 CHROMAT_FILE:
MSMg01no539_l18.g1 PHD_FILE: MSMg01no539_l18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:47 2005
(597 letters)
>mm_chr8_64097824_64098820
Length = 997
Score = 926 bits (479), Expect = 0.0
Identities = 501/509 (98%), Gaps = 2/509 (0%)
Strand = Plus / Minus
Query: 91 cagctctgtctgtctgtctgtctgtctgtctctgtctctctc--tctccctctttccttc 148
||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 997 cagctctgtctgtctgtctgtctgtctgtctgtgtctctctctatctccctctttccttc 938
Query: 149 cttctttcttttcattgaaaataggtttcttctctcattcaagacatcccaaccacagcc 208
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 937 cttctttcttttcattgaaaataggtttcttctctcattcaagacaccccaaccacagcc 878
Query: 209 ttcccttcctccagttctcccagttcctcaccacctctcctctccctccgtttcccttca 268
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 877 ttcccttcctccagttctcccagttcctcaccaccgctcctttccctccgtttcccttca 818
Query: 269 gaaaaggacaggcctccaagatggccaccatagcttttatcagaatcatgaagttggcag 328
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gacaaggacaggcctccaagatggccaccatagcttttatcagaatcatgaagttggcag 758
Query: 329 tggtgttaggcattcaagtcctgtagcttacttatggactgtgtatcctgtaactcagtg 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tggtgttaggcattcaagtcctgtagcttacttatggactgtgtatcctgtaactcagtg 698
Query: 389 ttttatgataatctttgaactccttaagcagtgagtatcttgtgattatagaaagaagaa 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 697 ttttatgataatctttgaactccttaagcagtgagtatcttgtgattatagaaagaataa 638
Query: 449 gcacatgttaaataattggaatcagaacatctatttgatggatgggttcttgggagaaca 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gcacatgttaaataattggaatcagaacatctatttgatggatgggttcttgggagaaca 578
Query: 509 tgtgcaataaattttggatgtctgactccttttatccaataaagactatggcaacttacc 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tgtgcaataaattttggatgtctgactccttttatccaataaagactatggcaacttacc 518
Query: 569 ttaaacattgtattcgtttcccagaggca 597
|||||||||||||||||||||||||||||
Sbjct: 517 ttaaacattgtattcgtttcccagaggca 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
