ACGTAACTAGAACGGAGCGCGTGGCGCCCTCCCCCCTTTAAAAATAAAAA
AAAAATATTTTTGGGGGCCCGGGGGGGGGCCCCGGGGGCCCCCCTTTAAA
AAAATAAAAACCGGGAAAAAAAACTTTCCCAAAACCCCTAAAAAAAATAA
TTTTTTTTTTCCCCCCCCCCCAAAAAAGGGGGAAAAAATTTCCCCCCCGG
GGGGGGGGGGGGAAAAAAAAAATTTTCCCCAAAAAGGGGTTTTTAAAATT
TTTTTTGGGGCCCCCCCCCGGGGGGGGGGGGGNAAAAAAAAAAAAAGAAA
TTTGGGGGGGCTAACAAAGGAAATTAAGTCAAACAGAAAAGGGTTTTAAA
TAAAACCCTAAATAAAAATCCCCAAGGAATTTGGGGAAGACATTTAACAA
TTGGGCAAGGGGGAAAACAAAGGGGATATTTTTAAAAAAAAAAAATGTGC
CAAAAAAACAAGAGAAATTTTGGTGGTTTTTTCCCCATAAAAAACCCCCC
AAAAAAAAAAAAAAAAACTTTAAAAAAAAAAAAACCCCCCCTTTTGAAAA
AAAAAGAAAAAAAATCCCCCCAAAAAAAAAAGAGCCCCAAAAAAAAATCT
CCTTCCAAAAAAAAAAAGNAATAAAAAAAAAAAACCCCCNNNCCTCCCCC
TCTCCCCCCCCGGGGGGAGGAAAAAAAAAAAAAAAAAAATGGGGGGGGAA
AAAAAAAAAAAAAAAAACCTCCCCGGTTATATATTGGGCCCCCCCCCCAC
AAAAAAAAAAAAAAGAGGCGGGTCCCCCTGAAAAAAAAAAAAAAAAAAAA
CCCCCCCCCCCCTCCCTTTATTTTAAAATTGGGAAAAAAAAAAACAAAAT
GGGGGGTGGGGGGGGGCTCCCTCCCTCT

NNNTTGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAGAGCCACCAATTTTCAGAC
TATGTTCAAAGCCCAAAAGAGCTAGAATCAGGAATCAGTGATGGAACACA
GCAGTTGTAGCAACAGGATAGATGAGCTTATCAATGAGAGTGAGAACAAG
TGGGGAAAAGATTTAAAAAAGTCCCTTCTTTCATCTCCTCTTCTCTGGGA
TACCAATAGAAGGTGCTACCCATATTTAAGGTAGATTTCCCTACTTCAAA
TAATCTGATCAAAAACATCCCTCACACGAGTTCCCAATGGTTTGCCTTTT
AGTTGATTCTAAAGCCATTCAACTTGACGTGATTAGCCATTACAGTGATT
AAAGTCCTAATTAATGAAGATTGAGGGACTAATCATATTCCAACCTTTTA
CCTCAAGGGTTTGCCTGTGAGTGGAAAAGAATGGGCATATCTCTTACTAA
GACTTATATACCACCGGGAGAGTAAGAGAGTTTGTGTCTGTGTGTGTATG
TGTGTCTATGACTTCGTATGTCTGTGTGTGTCTGTGTCTGTTTGTGTGTG
TCTGTATATGTCTCTCTCTCTCTGTGTTTCATTTCTATGTGAAGCATACA
CTATGTTTTTAAACATTCAGTGTTCATTACAGAAGAATTAAAGAATTTCA
GTAGCCAGTCACTAAATGGTCACATTATGCAGCAN

Query= MSMg01no540_c12.g1 MSMg01no540_c12.g1 CHROMAT_FILE:
MSMg01no540_c12.g1 PHD_FILE: MSMg01no540_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:20 2005
         (657 letters)



>mm_chr8_30219899_30220955
          Length = 1057

 Score = 1214 bits (628), Expect = 0.0
 Identities = 649/656 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctagagccaccaattttcagactatgttcaaagcccaaaagagctagaatcaggaatcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 ctagagccaccaattttcagactatgttcaaagcccaaaagagctagaatcaggaatcag 911

                                                                       
Query: 61  tgatggaacacagcagttgtagcaacaggatagatgagcttatcaatgagagtgagaaca 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 tgatggaacacagcagtcgtagcaacaggatagatgagcttatcaatgagagtgagaaca 851

                                                                       
Query: 121 agtggggaaaagatttaaaaaagtcccttctttcatctcctcttctctgggataccaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 agtggggaaaagatttaaaaaagtcccttctttcatctcctcttctctgggataccaata 791

                                                                       
Query: 181 gaaggtgctacccatatttaaggtagatttccctacttcaaataatctgatcaaaaacat 240
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gaaggtgttacccatatttaaggtagatttccctacttcaaataatctgatcaaaaacat 731

                                                                       
Query: 241 ccctcacacgagttcccaatggtttgccttttagttgattctaaagccattcaacttgac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ccctcacacgagttcccaatggtttgccttttagttgattctaaagccattcaacttgac 671

                                                                       
Query: 301 gtgattagccattacagtgattaaagtcctaattaatgaagattgagggactaatcatat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gtgattagccattacagtgattaaagtcctaattaatgaagattgagggactaatcatat 611

                                                                       
Query: 361 tccaaccttttacctcaagggtttgcctgtgagtggaaaagaatgggcatatctcttact 420
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tccaaccatttacctcaagggtttgcctgtgagtggaaaagaatgggcatatctcttact 551

                                                                       
Query: 421 aagacttatataccaccgggagagtaagagagtttgtgtctgtgtgtgtatgtgtgtcta 480
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aagacttatataccactgggagagtaagagagtttgtgtctgtgtgtgtatgtgtgtcta 491

                                                                       
Query: 481 tgacttcgtatgtctgtgtgtgtctgtgtctgtttgtgtgtgtctgtatatgtctctctc 540
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgactttgtatgtctgtgtgtgtctgtgtctgtttgtgtgtgtctgtatatgtctctctc 431

                                                                       
Query: 541 tctctgtgtttcatttctatgtgaagcatacactatgtttttaaacattcagtgttcatt 600
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 430 tctctgtgtttcatttctatgtgaagcatacactatgtttttaaatattcagtgttcatt 371

                                                                   
Query: 601 acagaagaattaaagaatttcagtagccagtcactaaatggtcacattatgcagca 656
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 370 acagaagaattaaagaatttcagtagccagtcactgaatggtcacattatgcagca 315


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)