CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTACATCTTGATCTGCATGCAGCAGAAGGAGACGGTGTGCCATACTG
GGTGTAGCTTGAGCATAGGAGACCTCAAAACCCACTCCCATAGTGATACA
CTTCCTCCAACAAGGCCACACCTGCTCCAACAAGGCCATACCTCCTAATA
GTGTCTCTCCCTATGGGCCAAGCATTCAAACACATTGAGTCTATGGAGGC
CATAACATCACACCATCTTCATGGAAGATGTTATGCGGTTTTTTTTTGTT
TTTTTGTTTTTTTTGTTTTTTTGGTTTTTGGAGATAGGGTTTCTCTGTGT
AGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACT
CAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTATGTG
CCACCATGCCTGGCTCATTATGCATATTTTACTAAGAGTTTCAATGTAAT
CATCACATAAGCTTTATTGTATATATGGGGTTGGGTTAATTATCACTAGG
AAACCTTTTTCCCAATGGTTCTGTGCTTAAATATGCCTATAATAAACTAC
CTGCTGCTCAACTCTTGAAGTCTGAACCAGAGTAGCTGGTGAGCTAGTGA
ATCATACTGAACTGGAATTCCTTCTTGCTTCATGCTGAGCAACACTGTCT
TGGCCATGTGTTTCAGGGATCTCCATATACCATGGTCCATTTCAGTTGCT
GCCTCTGCCAACTACCACAGCCAGN

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATATTTTGATAGATCACATGATTG
TGAACATTGTTTAAATTGTCTCCCTGGTATGACTACAAGATCTTCTCTAA
ACATAGGAACATATGGGTTAACATTGAACTTAGGAGATAGGCACACTGTT
TTCCAGGGCACAGTCTCCTCAAGACAGGATAGGAAGCCCAGGGCTGCACA
TGCCCACAAAGACTTCCAATTTCCCCAAGTCATGTCACTTTTCTATAACA
GAATGGGAAGAAAATAAAATCTCACCGTCGCCTTGATTTTTATTTCTCTG
TTCCCCAGGGACGATCCTTATCTTCTCATATCTTCATTGGCCACAACTCT
TCTCAGAATTATGTGAGTCTGGTCTGCATTCTCTTCCTTCCTGTGTCTAC
ACTTTCTACTTAAGGCTGACTCCTGCCTCAATTCCTTTAGAGACACACTG
CTGGTGGCACACACTTTCCTTCGACTTTGGTTCTGGAAGTGCCTTCCTTT
CTGTCCCATCACTGAAAAGTAGTGTTCCCATGTCACGAGTTCTAGGCTGG
CAGGTGTCTGGGGTGCACTGATGATGTTGGTCCCTTTACTGACTCCTACA
ATTACAGCTGAGAAGTTGGCCGTTCCTTTGGTCGCTCCTTCAAGGGCGGC
CACTTTCCTTCCATTCCCCATGTTTTAGCCAGTGTGTGCAGATGTGACTA
CGCCCCAAGCATGTGTGTN

Query= MSMg01no541_n21.g1 MSMg01no541_n21.g1 CHROMAT_FILE:
MSMg01no541_n21.g1 PHD_FILE: MSMg01no541_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:41 2005
         (648 letters)



>mm_chr8_35564553_35565600
          Length = 1048

 Score = 1218 bits (630), Expect = 0.0
 Identities = 640/648 (98%), Gaps = 8/648 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   catattttgatagatcacatgattgtgaacattgtttaaattgtctccctggtatgacta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 catattttgatagatcacatgattgtgaacattgtttaaattgtctccctggtatgacta 641

                                                                       
Query: 61  caagatcttctctaaacataggaacatatgggttaacattgaacttaggagataggcaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 caagatcttctctaaacataggaacatatgggttaacattgaacttaggagataggcaca 581

                                                                       
Query: 121 ctgttttccagggcacagtctcctcaagacaggataggaagcccagggctgcacatgccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctgttttccagggcacagtctcctcaagacaggataggaagcccagggctgcacatgccc 521

                                                                       
Query: 181 acaaagacttccaatttccccaagtcatgtcacttttctataacagaatgggaagaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 acaaagacttccaatttccccaagtcatgtcacttttctataacagaatgggaagaaaat 461

                                                                       
Query: 241 aaaatctcaccgtcgccttgatttttatttctctgttccccagggacgatccttatcttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aaaatctcaccgtcgccttgatttttatttctctgttccccagggacgatccttatcttc 401

                                                                       
Query: 301 tcatatcttcattggccacaactcttctcagaattatgtgagtctggtctgcattctctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcatatcttcattggccacaactcttctcagaattatgtgagtctggtctgcattctctt 341

                                                                       
Query: 361 ccttcctgtgtctacactttctacttaaggctgactcctgcctcaattcctttagagaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ccttcctgtgtctacactttctacttaaggctgactcctgcctcaattcctttagagaca 281

                                                                       
Query: 421 cactgctggtggcacacactttccttcgactttggttctggaagtgccttcctttctgtc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cactgctggtggcacacactttccttcgactttggttctggaagtgccttcctttctgtc 221

                                                                       
Query: 481 ccatcactgaaaagtagtgttcccatgtcacgagttctaggctggcaggtgtctggggtg 540
           |||||||||||||||||        |||||||||||||||||||||||||||||||||||
Sbjct: 220 ccatcactgaaaagtag--------tgtcacgagttctaggctggcaggtgtctggggtg 169

                                                                       
Query: 541 cactgatgatgttggtccctttactgactcctacaattacagctgagaagttggccgttc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 cactgatgatgttggtccctttactgactcctacaattacagctgagaagttggccgttc 109

                                                           
Query: 601 ctttggtcgctccttcaagggcggccactttccttccattccccatgt 648
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ctttggtcgctccttcaagggcggccactttccttccattccccatgt 61


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)