NNAAAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTATTTTCTTTTTCTTCATTTTATTAATCATCCCATTCATT
TACATCGCAAATGATATCCCCTTTCCTGGTTATCCGTCCACAAACCCCTC
ATCTCAATCTGCCCTCTCCCCCCTCCCTTTTGCCTTTATGAGGATGTTCA
CCCACTCATCCACCTTCTTCCACCCCGCCACTCCAGCTTCCCCCTATGTT
GGGGCATCAAACCAAGGCCTCCCCTCCCATTGATGTCAGACAAGGCCATC
CTCTGCTACATATGAATCTGGAGCCAAGGATCTCTCCGTGTACACTCCTT
GATTAGTGGTCTAGTCCCTGGGAGTGCTGGGTGGTCCAGCCAGCTGACAT
TATTCTTCCTATGGGGTTGCAATCCCCCTCCGTTCCTCTACTCCTTCCCC
CACCGGGGTCCTCGAGCTCAGTCTGATGGTTGGCTCCAAGCTCCAAGCAT
CCACATTTGCATTGGGCAGAACCTAGCAGAACCTCCCAAGGAACAGCTGG
CAACAAGAACAGTGTCAGGGTTTGGTGTCTTCAGACAGGATGGATTCCCA
GGTGAGGCGGTCCCCAGATGGCCACAATGATGGAATTCTACCATTTAAGG
TAAAATAGATGAAACTGGAAACTTCACAAGTGAAGTAAAACAGTCATAAA
AAGAAAAGTACTAATGTGTAATAGGTTGGATTTGTTGT

GGAGGGGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAATCAAAATATATTAT
ATAAAAACAATTACTTTTCTTTAAAAGGGAGAGAAATGAACTGTGCATAG
TGTCCTTCCCTGGCTACAGACACAGTGACCAGCTGCTTACAGCTGCCACA
GCTAGGGGTGCTCATTATCATGTGTTCCCTGCCTCCCAACTGAGCGGACA
GAACCTGTTCCTTCCTTGCTCCCCTTTCATCAAGTATTTTGACATAGCAG
AGTGCAGTAAGTAATATGAGCCCTCCCTCCAGAAGGACTATGTGCTAAGG
TCTTAGCTGTCAACCTGAGGGGATCCTGAAAGGCAACAAAACCTTCAAAG
GGTGGGCCTACTTCCAGGAAGTTGGGTCACTGTGGGGGCTTTTGAAGATG
ATGTTGGTGCCCCAGACACTTCCTTTCCTTCTTTGTTTCCAGTTGCCATG
AGGCGAGCAACCTTAGCCCGTCATACAATTGTCATAATGATGTGAGCTGC
TACCTTGCCACAAACACAAAACAAAACAGGGCCAGATGATCATGGTGGGA
GTCTCTGAAATCATGAAATCATAAGCCCTTTATCCTTATAACTTTATTTA
TAACAAATATTTTTATAATCATGGACCTGATTAAAATAAAAGTGTTTCCT
TTGCGAGCCAGCATTGAGAGAGTGAGAGGACAAGCCACAGACTN

Query= MSMg01no544_j23.g1 MSMg01no544_j23.g1 CHROMAT_FILE:
MSMg01no544_j23.g1 PHD_FILE: MSMg01no544_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:21 2005
         (648 letters)



>mm_chr8_24061120_24062167
          Length = 1048

 Score = 1056 bits (546), Expect = 0.0
 Identities = 597/614 (97%)
 Strand = Plus / Minus

                                                                        
Query: 35   ttctttaaaagggagagaaatgaactgtgcatagtgtccttccctggctacagacacagt 94
            ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 1048 ttcttaaaaagggagagaaatgaactgtgtatagtgtccttccctggctgcagacacagt 989

                                                                        
Query: 95   gaccagctgcttacagctgccacagctaggggtgctcattatcatgtgttccctgcctcc 154
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988  gaccagctgtttacagctgccacagctaggggtgctcattatcatgtgttccctgcctcc 929

                                                                        
Query: 155  caactgagcggacagaacctgttccttccttgctcccctttcatcaagtattttgacata 214
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 928  caactgagcggacagaacctgttccttccttgctcccctttcatcaagtattttgacaca 869

                                                                        
Query: 215  gcagagtgcagtaagtaatatgagccctccctccagaaggactatgtgctaaggtcttag 274
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 868  gcagagtgcagtaagtaatatgagccctccctccagaaggactatgtgctaaagtcttag 809

                                                                        
Query: 275  ctgtcaacctgaggggatcctgaaaggcaacaaaaccttcaaagggtgggcctacttcca 334
            |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 808  ctgtcaacctgaggtgatcctgagaggtaacaaaaccttcaaagggtgggcctacttcca 749

                                                                        
Query: 335  ggaagttgggtcactgtgggggcttttgaagatgatgttggtgccccagacacttccttt 394
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 748  ggaagttgggtcactgtgggggcttttgaagataatgttggtgccccagacacttccttt 689

                                                                        
Query: 395  ccttctttgtttccagttgccatgaggcgagcaaccttagcccgtcatacaattgtcata 454
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688  ccttctttgcttccagttgccatgaggcgagcaaccttagcccgtcatacaattgtcata 629

                                                                        
Query: 455  atgatgtgagctgctaccttgccacaaacacaaaacaaaacagggccagatgatcatggt 514
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628  atgatgtgagttgctaccttgccacaaacacaaaacaaaacagggccagatgatcatggt 569

                                                                        
Query: 515  gggagtctctgaaatcatgaaatcataagccctttatccttataactttatttataacaa 574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568  gggagtctctgaaatcatgaaatcataagccctttatccttataactttatttataacaa 509

                                                                        
Query: 575  atatttttataatcatggacctgattaaaataaaagtgtttcctttgcgagccagcattg 634
            |||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||
Sbjct: 508  atatttttataatcatggacctgattaaaataaacgtgtttcctttgcaagtcagcattg 449

                          
Query: 635  agagagtgagagga 648
            ||||| | ||||||
Sbjct: 448  agagactaagagga 435


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)