AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
AGTTATTGCATATAAGCTAACACAGGACAGTGCCTGGAATATCATCAGAA
TCCATCGTTGTCTGTTGTCATTATATGGTTTTTTTATGAGATTCTTTATT
CTTGGGGTTATTTGTTCAATATTTTCATTTGTCCCAAACATAAAGATCCA
AGAGGTTCAGAGAATGCCTCTGTTTTGTTTACTGCTAAATTATGTGTTTA
CTTAGAATGCTACATCAAACACTGAAAAGTCTTTCAATAACAAGTGAATT
GAGCAATGAACTGAAAATCACACCAGAAACAGCCAATAATATGTAGCATA
TTTTATATCATATCCTCAGTGATAGCACAACTTGAGGCTTCTTGTAGACA
AGAAACAATATATTTTGGATGAGCAAATGATGTATTTTGAAGATATGGGA
AGTGATAGATATAGAAAATATGTGGGGCTACAGAGATGGCTCAGTGGCCA
AGAGTAGTAGCTGCTCTTCCAGAAGACCCAGATTTGATTCCTAATAGCCA
CATAATGCTTTACAGCCATCCATAACTACTCCAGTTCCAGGAGATCCAAT
AACCATTTTTGGACTCTCCAAGCACACAAGTTATGCACAGATGTACACAG
AGACAAAATAATGGAAATTACATGCACACATATATAAGATGAAGAAAAAA
AAAACAAATGT

CTGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTGAAAAGTTGGTTGGATGATGTTTTGCTGG
GACAAACACATGAAGGAATATTTAGCTGAAGTGAACACTGGAGAAAGGAC
TTTCTGCTGAAGCAAGCATGTGAAAGGACACATGATAAAGGATTCTTTAC
TAAAAACCTGCATGTATTGATCCAGTTTACATTGTGTAGTTGAGCTCCTT
TTTGTCAGAACTCCATAGAGAGAAGGGAGCCAAAAACTTCTGGTGTTATG
CCGTAGACTCAGGCTGATTGGCCCAGTGATATCAGCTAAGACAGATCTTC
ACATCGCTGAGAGAGGCACAGCCAAGAACTTCTCTTGGCGTTCTGTCTGG
TTCCTCCTTCTAACTGGAGGCTGAGGCTTGGCTGTCTCCCTAGGTCGTGT
TACTGCTGCTACTGACCTGATATTTCCATGAAGTGTTTGTGAATGGATTG
AGCTGCCACCGCTAACCTGTGAACTGAACTGCCAATTTCTAGATAACACA
GATTCGAGTTGTTCCAAAAAACCTTTCTAAACAGGTCCACTTCCCTTGTA
TATTTTCTTTCCCACTACCTCTGGTGGGTGGTGGGTTAAAAGGGAGGTTA
AAGCATTAAAGAGCCATCATTAAAAACAGACTTTGAAAAATTAAATTTTA
CAGGCATAAATTTTTAGG

Query= MSMg01no545_k19.b1 MSMg01no545_k19.b1 CHROMAT_FILE:
MSMg01no545_k19.b1 PHD_FILE: MSMg01no545_k19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:43 2005
         (613 letters)



>mm_chr8_76547322_76548334
          Length = 1013

 Score = 1154 bits (597), Expect = 0.0
 Identities = 606/613 (98%), Gaps = 7/613 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tataagctaacacaggacagtgcctggaatatcatcagaatccatcgttgtctgttgtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tataagctaacacaggacagtgcctggaatatcatcagaatccatcgttgtctgttgtca 554

                                                                       
Query: 61  ttatatggtttttttatgagattctttattcttggggttatttgttcaatattttcattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttatatggtttttttatgagattctttattcttggggttatttgttcaatattttcattt 494

                                                                       
Query: 121 gtcccaaacataaagatccaagaggttcagagaatgcctctgttttgtttactgctaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtcccaaacataaagatccaagaggttcagagaatgcctctgttttgtttactgctaaat 434

                                                                       
Query: 181 tatgtgtttacttagaatgctacatcaaacactgaaaagtctttcaataacaagtgaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tatgtgtttacttagaatgctacatcaaacactgaaaagtctttcaataacaagtgaatt 374

                                                                       
Query: 241 gagcaatgaactgaaaatcacaccagaaacagccaataatatgtagcatattttatatca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gagcaatgaactgaaaatcacaccagaaacagccaataatatgtagcatattttatatca 314

                                                                       
Query: 301 tatcctcagtgatagcacaacttgaggcttcttgtagacaagaaacaatatattttggat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tatcctcagtgatagcacaacttgaggcttcttgtagacaagaaacaatatattttggat 254

                                                                       
Query: 361 gagcaaatgatgtattttgaagatatgggaagtgatagatatagaaaatatgtggggcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gagcaaatgatgtattttgaagatatgggaagtgatagatatagaaaatatgtggggcta 194

                                                                       
Query: 421 cagagatggctcagtggccaagagtagtagctgctcttccagaagacccagatttgattc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cagagatggctcagtggccaagagtagtagctgctcttccagaagacccagatttgattc 134

                                                                       
Query: 481 ctaatagccacataatgctttacagccatccataactactccagttccaggagatccaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ctaatagccacataatgctttacagccatccataactactccagttccaggagatccaat 74

                                                                       
Query: 541 aaccatttttggactct-------ccaagcacacaagttatgcacagatgtacacagaga 593
           |||||||||||||||||       ||||||||||||||||||||||||||||||||||||
Sbjct: 73  aaccatttttggactctgctgataccaagcacacaagttatgcacagatgtacacagaga 14

                        
Query: 594 caaaataatggaa 606
           |||||||||||||
Sbjct: 13  caaaataatggaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)