XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGT
TTGGGCATGTTTCTATAGTATAATCTTATGTCTACCAACAATCAATCTAC
TTTTTAACACTTTTTCATGTTAATTTTTTTTCTTGCCTTGTTGTCTTGGC
TAAAACATTCCCCAGTATAGTTGCCAATTCCTTCCCCTCTTCCGCTTAAC
TCCTTCTTCCCCAAAAGTCCCCTTCCTACCTTTATGTCTTTGTGCATGTG
TTCTTTTGAAGTTAATTAAGACTGCATTCATTAGCACAAGTGTTTCCCCT
TCCCTTGGAAATAAACAACTTACCAGTGGATATATATATCATCATGGATT
ATGATTCTTCTACCCTCTAGCAACCAATAACTGTCAATAAATCCTTAAAG
AGGGGTGGAGTCTTATAAGCTCCTTATGAAGGTAAAGGATTTTGATAGAC
ATCTATGTCTTACTCAGTGTCTAAATGTTAGAATTTTCAACGCTTATGAC
CAAATTTTAATTTTCTATAGAGATTTGCAAATGTCCTTTGGCAGATTGAA
GAGAAAGTTATTTCCATTTTCTAGTTTGTTAAGAGCTTTTAAATATCATA
AATTTATATAAAATTTTATTAAGTGTACTTCTCAAATCCACTGAGACAAT
AGGGATTTAAAACAATTATTGTGTTAATGTATTAATTTATATTAATTGAC
TATCACCATTTTTACTAATATACATTTGTGGGATTAAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXATGCCAGCAGGCTTGTGTTGCCATCACCACTGAA
ATTATTCTTGTCAAGGTCACACGGAAAGTCTTGGGTCAATATCAATTTTC
ACCTTATTTGAGATTACAAACAGTGATTAACACATTTGTTCATAGTTTCT
TTTAAAAACTTCTCTCTTTTTCTTCGTACTCCATCTCATTATGAGTTTCT
TGAGACTCTAACCTCACTGTTACTATTGTCTAGTATGTTTTATTTAATCC
TGACTTTAGGCCCCAAAGATTTCATCCTTAAATTCCTTGGTACTCTCTGG
GTTTTTTTGTTTTTTTGTTTGTTTGTTTGTTTGGTTGGTTGGTTGGTTGG
NTTGGTTGGTTGGTTGNNNANNNNNNANNNNNNNNNNNNNNNNNNANNAN
NANNNNAAAANNANNAAAAANNNNAAAAAAAAANAAAAAANNAAANNAAA
AAAAANNAAANNNNAAAAAAAAANNNNAAAAAAAANANANNNNANNAAAA
ANAAAANAANNAAAAAAAAAANNAAAAAANNAAAAAAAAAAAAANNANNA
NNNAANNNAANAAANNAAAAAAAAAAAAANNNAAANNNNANAAAAAAAAA
ANAANNAAAANNAAAATTAAAANNAANNAAAAAANAANAAAAANNNAAAA
NANAAAAAAAAAAAANAAAAANAAAAAAAANNAAAAATTAANNNAAAAAA
AATTAAAANAAAAAAAAA

Query= MSMg01no547_e23.b1 MSMg01no547_e23.b1 CHROMAT_FILE:
MSMg01no547_e23.b1 PHD_FILE: MSMg01no547_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:54 2005
         (696 letters)



>mm_chr8_31920977_31922072
          Length = 1096

 Score = 1326 bits (686), Expect = 0.0
 Identities = 686/686 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgtttgggcatgtttctatagtataatcttatgtctaccaacaatcaatctact 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gaattctgtttgggcatgtttctatagtataatcttatgtctaccaacaatcaatctact 627

                                                                       
Query: 65  ttttaacactttttcatgttaattttttttcttgccttgttgtcttggctaaaacattcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttttaacactttttcatgttaattttttttcttgccttgttgtcttggctaaaacattcc 567

                                                                       
Query: 125 ccagtatagttgccaattccttcccctcttccgcttaactccttcttccccaaaagtccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ccagtatagttgccaattccttcccctcttccgcttaactccttcttccccaaaagtccc 507

                                                                       
Query: 185 cttcctacctttatgtctttgtgcatgtgttcttttgaagttaattaagactgcattcat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cttcctacctttatgtctttgtgcatgtgttcttttgaagttaattaagactgcattcat 447

                                                                       
Query: 245 tagcacaagtgtttccccttcccttggaaataaacaacttaccagtggatatatatatca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tagcacaagtgtttccccttcccttggaaataaacaacttaccagtggatatatatatca 387

                                                                       
Query: 305 tcatggattatgattcttctaccctctagcaaccaataactgtcaataaatccttaaaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tcatggattatgattcttctaccctctagcaaccaataactgtcaataaatccttaaaga 327

                                                                       
Query: 365 ggggtggagtcttataagctccttatgaaggtaaaggattttgatagacatctatgtctt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggggtggagtcttataagctccttatgaaggtaaaggattttgatagacatctatgtctt 267

                                                                       
Query: 425 actcagtgtctaaatgttagaattttcaacgcttatgaccaaattttaattttctataga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 actcagtgtctaaatgttagaattttcaacgcttatgaccaaattttaattttctataga 207

                                                                       
Query: 485 gatttgcaaatgtcctttggcagattgaagagaaagttatttccattttctagtttgtta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gatttgcaaatgtcctttggcagattgaagagaaagttatttccattttctagtttgtta 147

                                                                       
Query: 545 agagcttttaaatatcataaatttatataaaattttattaagtgtacttctcaaatccac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agagcttttaaatatcataaatttatataaaattttattaagtgtacttctcaaatccac 87

                                                                       
Query: 605 tgagacaatagggatttaaaacaattattgtgttaatgtattaatttatattaattgact 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  tgagacaatagggatttaaaacaattattgtgttaatgtattaatttatattaattgact 27

                                     
Query: 665 atcaccatttttactaatatacattt 690
           ||||||||||||||||||||||||||
Sbjct: 26  atcaccatttttactaatatacattt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space:   744996
Effective search space used:   744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)