Query= MSMg01no547_h03.b1 MSMg01no547_h03.b1 CHROMAT_FILE:
MSMg01no547_h03.b1 PHD_FILE: MSMg01no547_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:05 2005
(648 letters)
>mm_chr8_18724148_18725196
Length = 1049
Score = 1208 bits (625), Expect = 0.0
Identities = 640/647 (98%), Gaps = 5/647 (0%)
Strand = Plus / Plus
Query: 5 gaattctcattttatta---taatatcaaactgtgagcttgacgttatcatgccctatgt 61
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcatttta--aagataatatcaaactgtgagcttgacgttatcatgccctatgt 262
Query: 62 attccctgcattttctgactcaaccagaagaacgttaaaggacaagatgtttgaaaatga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 attccctgcattttctgactcaaccagaagaacgttaaaggacaagatgtttgaaaatga 322
Query: 122 aacctttaatgtatttagctgtgatcgggagtatttgcttaacatgggtgagtttgtacc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aacctttaatgtatttagctgtgatcgggagtatttgcttaacatgggtgagtttgtacc 382
Query: 182 tttcacctgggactacctgcgtaacgcctggagcatgaacttggggattcaagttcactg 241
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttttacctgggactacctgcgtaacgcctggagcatgaacttggggattcaagttcactg 442
Query: 242 gccttgaactgtggatgaaactgttctagctgcctgaggacagttaaaggattcagttag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gccttgaactgtggatgaaactgttctagctgcctgaggacagttaaaggattcagttag 502
Query: 302 gtaaattgtaatttagcattccgaaacatgactctttccggatcaagcataaaaggcatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtaaattgtaatttagcattccgaaacatgactctttccggatcaagcataaaaggcatg 562
Query: 362 tgcccttggaagcccaagaaagaattcatacagttcccattagtctaaaaataaataaca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgcccttggaagcccaagaaagaattcatacagttcccattagtctaaaaataaataaca 622
Query: 422 aataaagaaatgtctgagtcatgcattgcatttgatggagtccagtggcagagagaactt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aataaagaaatgtctgagtcatgcattgcatttgatggagtccagtggcagagagaactt 682
Query: 482 aagctgtactgtggatggtggctctgcccggtgctcggtggagtgaggccgcagcgctct 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aagctgtactgtggatggtggctctgcccggtgctcggtggagtgaggccgcagcgctct 742
Query: 542 gaggaagtgacacgagccagctgggtggatttaattctgtcttgggttcctccagtgcac 601
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaggaagtgatacgagccagctgggtggatttaattctgtcttgggttcctccagtgcac 802
Query: 602 taagtgtgtcatgctttgagtagcaatgtggaagcctggctgtgcca 648
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 taagtgtgtcatgctttgagtagcaatgtggaagcctggctgtgcca 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_h03.g1 MSMg01no547_h03.g1 CHROMAT_FILE:
MSMg01no547_h03.g1 PHD_FILE: MSMg01no547_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:05 2005
(150 letters)
>mm_chr8_18908375_18908924
Length = 550
Score = 284 bits (147), Expect = 1e-81
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 4 gaattctgggtaaagtagaagcagacccatagtagtttgaagtaaaaaataaataaaagc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gaattctgggtaaagtagaagcagacccatagtagtttgaagtaaaaaataaataaaagc 246
Query: 64 ttgggctttggactttgttctgggtttaatgctgttattgtcggtggtggttgtggttgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttgggctttggactttgttctgggtttaatgctgttattgtcggtggtggttgtggttgt 186
Query: 124 gattgtggttgtggtggtggtgatggt 150
|||||||||||||||||||||||||||
Sbjct: 185 gattgtggttgtggtggtggtgatggt 159
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 550
Length adjustment: 8
Effective length of query: 142
Effective length of database: 542
Effective search space: 76964
Effective search space used: 76964
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
