Query= MSMg01no547_j17.b1 MSMg01no547_j17.b1 CHROMAT_FILE:
MSMg01no547_j17.b1 PHD_FILE: MSMg01no547_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:17 2005
(487 letters)
>mm_chr8_18270231_18271117
Length = 887
Score = 920 bits (476), Expect = 0.0
Identities = 482/484 (99%), Gaps = 1/484 (0%)
Strand = Plus / Plus
Query: 5 gaattcttttcacatgcaatgatctactttgccaatctcctctgacatatgccttaccat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttcacatgcaatgatctactttgccaatctcctctgacatatgccttaccat 264
Query: 65 atgtatgcatgtaaactgtctcaaaatattttaaagacaaaagtgtatatatgtaactat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgtatgcatgtaaactgtctcaaaatattttaaagacaaaagtgtatatatgtaactat 324
Query: 125 aggaaatccatgaatgtatgaaaaaaatctggaatgtttctgcttttgagtctgagcaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggaaatccatgaatgtatgaaaaaaatctggaatgtttctgcttttgagtctgagcaac 384
Query: 185 tccactgtatgtaaatagcacattttcctcatgcattttgtctgcaaatagatacttaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccactgtatgtaaatagcacattttcctcatgcattttgtctgcaaatagatacttaag 444
Query: 245 ttggcaggtgcaatataatgggcgtgtcagtgcagacatctcttggaacccagctttcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggcaggtgcaatataatgggcgtgtcagtgcagacatctcttggaacccagctttcat 504
Query: 305 ctcactgaacatggatgaatcctgtgggtaggattcaaagtgaattaaagcagtcacaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctcactgaacatggatgaatcctgtgggtaggattcaaagtgaattaaagcagtcacaga 564
Query: 365 ccatggctggcccataaagactttggaactgtgcttgtctaaaatcaacagagtcatggg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccatggctggcccataaagactttggaactgtgcttgtctaaaatcaacagagtcatggg 624
Query: 425 aacagagtaacgtagttatgacagataaccatggagaggaaagagaagctgttattga-c 483
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 625 aacagagtaacgtagttatgacagataaccagggagaggaaagagaagctgttattgaac 684
Query: 484 aaag 487
||||
Sbjct: 685 aaag 688
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_j17.g1 MSMg01no547_j17.g1 CHROMAT_FILE:
MSMg01no547_j17.g1 PHD_FILE: MSMg01no547_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:17 2005
(675 letters)
>mm_chr8_18426808_18427882
Length = 1075
Score = 756 bits (391), Expect = 0.0
Identities = 403/407 (99%)
Strand = Plus / Minus
Query: 1 cagagttctggccttagaagtctaggagtcaaggcatcctagatgatgctagagataggt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cagagttctggccttaggagtctaggagtcaaggcatcctagatgatgctagagataggt 348
Query: 61 tgggttcacatactcatgttgagaagttaacagattgctgtttcctaccattatgctgtg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tgggttcacatgctcatgttgagaagttaacagattgctgtttcctaccattatgctgtg 288
Query: 121 cattttctttaattagctcatgcaagatacagcatctcctgcttcctgccctctggttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cattttctttaattagctcatgcaagatacagcatctcctgcttcctgccctctggttct 228
Query: 181 aaattctgaataattactacttgatagttttgagatttcatacaatgtagtttgattgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aaattctgaataattactacttgatagttttgagatttcatacaatgtagtttgattgca 168
Query: 241 tccaccaccgctcctactcctgactactcccatcaataccccaacccctaatccctaatt 300
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 167 tccaccacagctcctactcctgactactcccatcaataccccagcccctaatccctaatt 108
Query: 301 ttgtgtgcttaccaaaatatgggctttaaaaaaatagcccatggactcaaatttgtattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ttgtgtgcttaccaaaatatgggctttaaaaaaatagcccatggactcaaatttgtattg 48
Query: 361 tgcatatactcctgactatgatgctgctcactggagcatggtcaact 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 tgcatatactcctgactatgatgctgctcactggagcatggtcaact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
