TCTCCTGTCACNAAXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCA
GCACGAGGGGTCCAGCACATTCTTCTGGCTCTACAGTAGCCACCCTCACC
ACACACATGTACACACAGGCACACAGGTAATGTGAAATAATAAGTAAAAT
GAACTTGCAAGGGTCAGTTTTCTCTTCCGACTTTGTGGCTCCCTAGGGTC
ACTCTCAGATTTCATCAAACTTGGTCACCATTGCTTTACCTCCTACGCCA
TCTCATTGGCCCCCAAAACCTTAATTTTGGTACTTAAAAATTCATACGGA
CTCTATTCAATCCTACCACATTTAAAAATTAATATATGATAAAACATATC
TTTCTCCAGCACTTTTCCCTTGATCTCCTACTGTCCATGTTAGAGTCAGA
TAAAAGGCCTAGGCAAGAACATGCATTACTTTGGGCCCTGTGACTCACTT
TAATTTCCTATCATGGAAAGATGCCAAAAAATAACCAAGTAAAGAGCAAG
TATATAATTGAGCATAAATTAAGATACTCACAATTACTTCTGTTCCTTTG
CTGCTTATTGACAAAGTAGCAAGTTTTTTTTTTTGTTTTGTTTTGTTTTT
GTAAATTTGCTCGGTTTTGCTAAATTTTTGTAAATTTTGTTATTTAACTC
TATTTGAAGTGTAAAAGAGACTTACCAGCATTCTCTGCCCACCCTTCCCC
CTTCATTTGTGTTACCATCATTTTTTCTCATAATGCA

CTGTTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAACTTTTATCATGAATGGG
TGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTG
GTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTTC
GTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGA
TGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATT
GAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTA
TCTTTGTTGGGTCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCA
TAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGAAATAGTTT
GTGCAGAATTGGAATTAGATCTTCTTTGAAGGTCTGGTAGAACTCTGCAC
TAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTATTAATAACT
GCTTCTATTTCTTTAGGTGATATGGGACTGTTTAGATGGTCAACTTGATC
CTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGT
CCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATG
GTGTTTTGGATTTCTTCAGGATCTGTTGTTATGTCTCCCTTTTCATTTCT
GATN

Query= MSMg01no547_p22.b1 MSMg01no547_p22.b1 CHROMAT_FILE:
MSMg01no547_p22.b1 PHD_FILE: MSMg01no547_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:47 2005
         (675 letters)



>mm_chr8_51016401_51017475
          Length = 1075

 Score = 1218 bits (630), Expect = 0.0
 Identities = 661/672 (98%), Gaps = 2/672 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccagcacgaggggtccagcacattcttctggctctacagtagccaccctcacca 63
           ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagcaccagggatccagcacattcttctggctctacagtagccaccctcacca 263

                                                                       
Query: 64  cacacatgtacacacaggcacacaggtaatgtgaaataataagtaaaatgaacttgcaag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacacatgtacacacaggcacacaggtaatgtgaaataataagtaaaatgaacttgcaag 323

                                                                       
Query: 124 ggtcagttttctcttccgactttgtggctccctagggtcactctcagatttcatcaaact 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggtcagttttctcttccgactttgtggctccctagggtcactctcagatttcatcaaact 383

                                                                       
Query: 184 tggtcaccattgctttacctcctacgccatctcattggcccccaaaaccttaattttggt 243
           ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 tggtcgccattgctttacctcctacgccatctcattggcctccaaaaccttaattttggt 443

                                                                       
Query: 244 acttaaaaattcatacggactctattcaatcctaccacatttaaaaattaatatatgata 303
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acttaaaaattcatatggactctattcaatcctaccacatttaaaaattaatatatgata 503

                                                                       
Query: 304 aaacatatctttctccagcacttttcccttgatctcctactgtccatgttagagtcagat 363
           |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 aaacatatctttctcctgcacttttcccttgatttcctactgtccatgttagagtcagat 563

                                                                       
Query: 364 aaaaggcctaggcaagaacatgcattactttgggccctgtgactcactttaatttcctat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaaaggcctaggcaagaacatgcattactttgggccctgtgactcactttaatttcctat 623

                                                                       
Query: 424 catggaaagatgccaaaaaataaccaagtaaagagcaagtatataattgagcataaatta 483
           | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 624 cgtggaaagatgccaaaaaataaccaaataaagagcaagtatataattgagcataaatta 683

                                                                       
Query: 484 agatactcacaattacttctgttcctttgctgcttattgacaaagtagcaagtttttttt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agatactcacaattacttctgttcctttgctgcttattgacaaagtagcaagtttttttt 743

                                                                       
Query: 544 tttgttttgttttgtttttgtaaatttgctcggttttgctaaatttttgtaaattttgtt 603
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 t--gttttgttttgtttttgtaaatttgctcggttttgctaaatttttgtaaattttgtt 801

                                                                       
Query: 604 atttaactctatttgaagtgtaaaagagacttaccagcattctctgcccacccttccccc 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 atttaactctatttgaagtgtaaaagagacttaccagcattctctgcccacccttccccc 861

                       
Query: 664 ttcatttgtgtt 675
           ||||||||||||
Sbjct: 862 ttcatttgtgtt 873


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)