BAC Information

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BAC

Clone NameB6Ng01-002P13
Chromosome9 (Build37)
Map Location 84,325,062 - 84,326,223
singlet/doubletsinglet
Overlap genenone
Upstream gene4930431B11Rik, LOC100039186, LOC100039200, Sh3bgrl2, LOC100039222, Elovl4, Ttk, EG546150, Bckdhb, EG666669
Downstream geneLOC666672, BC023892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002P13.bB6Ng01-002P13.g
ACCDH840836DH840837
length1,2021,153
definitionDH840836|Mus musculus domesticus DNA, BAC clone: B6Ng01-002P13, 5' end.DH840837|Mus musculus domesticus DNA, BAC clone: B6Ng01-002P13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggctcatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaaccccactaaa
atcagggactagacaaggatggccactttcttcctacctattcaatatag
tacttgaagtcctagccagagcaatttggcaaaaggagataaggggatac
aaattggaaaggaagaaatcaaaatatcactatttgcagatgatatgata
gtatataaagtgaccctaaaaattccaccatagaactcctaaacctgata
aacaacttcagtgaagtagctggatataaaattaactcaaacaagtcatt
ggcctttctctacacaaagaataaacaggctgagaaagaaattagggaaa
taacacccttctcaatagtcacaaatactttaagataccttggtgtgact
ctaactcaggaagtgaaagatttgtatgataagaacttcaagtctctgaa
gaaagaattcaaagaagatgctcatggattggcaggatcaacatagtaag
aacagctatcttgccaaaagcaatctacagattcaatgcaatcccaatca
aaattccaactcaattcttcatagaaatttgcaaattcatctggaataac
aaaaaacctaggatagcaaaaactcttctcaaggacaaaagaacctctgg
tggaatcaccatgcctgacctcaagctgtactacagagcaattgtgataa
aaactgcatggtactggtatagcgacagacaagtagaccccccccctccc
caattgaatgctcagaaatgaacccacacacctatggtcacttgatcttt
ggcaagggagcaaaaaccatccagtggaaaaagacagcatttttatcaaa
tggttgctggcacaactggcagttatcatgtaaagatgaaattgatccat
tctatctcttgtactaaggtcaaatgtagtggatcagaacttcaccataa
actagaagctactataatctatgtagagaaagttgggaagtttgaagatt
gggtcatagggaaaaaatctgatgaacagcatgctgtgctgtagaatcga
gatgacatgaactcatccattgcatgcctctgttagccagatctggtcat
agacaagtccacctcatggaggattctttctataatctgaataggcccta
ac
gaattcttcccaacattcacttgttcttctcctctcaaacagaatttatt
ctttcctgggcttttatgactcagaccatctttttccctgccctggctat
aatattccttaacacatcttctaaagtgctggcttagtgattatgaaata
tctcagttgtgcctgtcttgaaatatccttatttcattttctatttcata
tgatagctttattggatagactcatcttggttatttgccttcaaggcttt
aaacctcccccccacctcttagtattactgaagagaatatttatgttatc
ttaattgtttttagtaaaaatctatggaagaagccgggcggtggtggcac
acacctttaatcccagcacttgggaggcagaggcaggcagatttctgggt
tagaggccagcctggtctataaagtgacttccaggagagccagggctaca
cagagaaaccttttctcgaaaaacaaacaaacaaaaatctatggaagaaa
gatgaaaaagagagccaggagttaacatgtgtcatgaaaagtactccttc
ctgaccttggacatttggacagcgttagctttccagtcagacatgaaaaa
aatggagttgggtgaaactggccaggatgtcacacctgaataatgatgtg
aaacttcagtttggttcaggctggggtcatctattagaggttatttaacc
tgtaaaggaggaagcagttgtctgaggaaacaagtgtgaccactggttgt
ttgttatcaaggctgtcactttcctactaatttgaggcagatggaacttt
gcaagactaaatttgcttgaaatcttgtcttccccaaagaatacattcct
tagtgggtagtatgttagtccagtttctgtggtttaataagtacccaaga
taacttagaaaatattgttttggttcttagttgcctcattgctctaaatc
tgtgaccaggaagcacagcatcatgggaaggtacaaaggagaaggcagct
cacttcattgtgcaggtagcagatgaagtagaagaagtgcaagactggct
acatcctgtctagtgtacatcttcttcataagctccacttctaaaaattc
tccagaatccaagagtgcattaggcttggtccaagtcttcaacataaatg
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_84325062_84326223
seq2: B6Ng01-002P13.g_68_1220

seq1  GAATTCTTCCCAACATTCACTTGTTCTTCTCCTCTCAAACAGAATTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCAACATTCACTTGTTCTTCTCCTCTCAAACAGAATTTATT  50

seq1  CTTTCCTGGGCTTTTATGACTCAGACCATCTTTTTCCCTGCCCTGGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGGGCTTTTATGACTCAGACCATCTTTTTCCCTGCCCTGGCTAT  100

seq1  AATATTCCTTAACACATCTTCTAAAGTGCTGGCTTAGTGATTATGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCTTAACACATCTTCTAAAGTGCTGGCTTAGTGATTATGAAATA  150

seq1  TCTCAGTTGTGCCTGTCTTGAAATATCCTTATTTCATTTTCTATTTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTTGTGCCTGTCTTGAAATATCCTTATTTCATTTTCTATTTCATA  200

seq1  TGATAGCTTTATTGGATAGACTCATCTTGGTTATTTGCCTTCAAGGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCTTTATTGGATAGACTCATCTTGGTTATTTGCCTTCAAGGCTTT  250

seq1  AAACCTCCCCCCCACCTCTTAGTATTACTGAAGAGAATATTTATGTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCCCCCCCACCTCTTAGTATTACTGAAGAGAATATTTATGTTATC  300

seq1  TTAATTGTTTTTAGTAAAAATCTATGGAAGAAGCCGGGCGGTGGTGGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTTTTTAGTAAAAATCTATGGAAGAAGCCGGGCGGTGGTGGCAC  350

seq1  ACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGGGT  400

seq1  TAGAGGCCAGCCTGGTCTATAAAGTGACTTCCAGGAGAGCCAGGGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCCAGCCTGGTCTATAAAGTGACTTCCAGGAGAGCCAGGGCTACA  450

seq1  CAGAGAAACCTTTTCTCGAAAAACAAACAAACAAAAATCTATGGAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACCTTTTCTCGAAAAACAAACAAACAAAAATCTATGGAAGAAA  500

seq1  GATGAAAAAGAGAGCCAGGAGTTAACATGTGTCATGAAAAGTACTCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAAAGAGAGCCAGGAGTTAACATGTGTCATGAAAAGTACTCCTTC  550

seq1  CTGACCTTGGACATTTGGACAGCGTTAGCTTTCCAGTCAGACATGAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTTGGACATTTGGACAGCGTTAGCTTTCCAGTCAGACATGAAAAA  600

seq1  AATGGAGTTGGGTGAAACTGGCCAGGATGTCACACCTGAATAATGATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGTTGGGTGAAACTGGCCAGGATGTCACACCTGAATAATGATGTG  650

seq1  AAACTTCAGTTTGGTTCAGGCTGGGGTCATCTATTAGAGGTTATTTAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCAGTTTGGTTCAGGCTGGGGTCATCTATTAGAGGTTATTTAACC  700

seq1  TGTAAAGGAGGAAGCAGTTGTCTGAGGAAACAAGTGTGACCACTGGTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGGAGGAAGCAGTTGTCTGAGGAAACAAGTGTGACCACTGGTTGT  750

seq1  TTGTTATCAAGGCTGTCACTTTCCTACTAATTTGAGGCAGATGGAACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATCAAGGCTGTCACTTTCCTACTAATTTGAGGCAGATGGAACTTT  800

seq1  GCAAGACTAAATTTGCTTGAAATCTTGTCTTCCCCAAAGAATACATTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACTAAATTTGCTTGAAATCTTGTCTTCCCCAAAGAATACATTCCT  850

seq1  TAGTGGGTAGTATGTTAGTCCAGTTTCTGTGGTTTTAATAAGTACCCAAG  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAGTGGGTAGTATGTTAGTCCAGTTTCTGTGG-TTTAATAAGTACCCAAG  899

seq1  ATAACTTAGAAAATATTGTTTTGGTTCTTAGTTGCCTCATTGCTCTAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTAGAAAATATTGTTTTGGTTCTTAGTTGCCTCATTGCTCTAAAT  949

seq1  CTGTGACCAGGAAGCACAGCATCATGGGAAGGTACAAAGGAGAAGGCAGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACCAGGAAGCACAGCATCATGGGAAGGTACAAAGGAGAAGGCAGC  999

seq1  TCACCTCATTGTGGCCAGGTAGCAGATGAGGTAGAGAAGGTGCAAGACTG  1050
      |||| ||||||||  |||||||||||||| |||||  | |||||||||||
seq2  TCACTTCATTGTG--CAGGTAGCAGATGAAGTAGAAGAAGTGCAAGACTG  1047

seq1  GCTACATCCTGTCTAGTGTACATCTTCCTTCCATTAAGCTCCACCTCCTA  1100
      |||||||||||||||||||||||||| ||||   ||||||||| || |||
seq2  GCTACATCCTGTCTAGTGTACATCTT-CTTC--ATAAGCTCCA-CTTCTA  1093

seq1  AAAATCCTACCAGATCCCAAGAGTGCCATAGGCTAGTGTCCAAGTCTTCA  1150
      ||||| || |||||  ||||||||||  |||||| | |||||||||||||
seq2  AAAATTCT-CCAGAATCCAAGAGTGCATTAGGCTTG-GTCCAAGTCTTCA  1141

seq1  ACATAAATGCTT  1162
      ||||||||||||
seq2  ACATAAATGCTT  1153