BAC Information

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BAC

Clone NameB6Ng01-004F09
Chromosome9 (Build37)
Map Location 38,998,819 - 38,999,981
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943
Downstream geneOlfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1, Olfr978, Olfr979, Olfr980, Olfr981, 1700001J11Rik, Olfr982, Olfr983, Olfr984, Olfr985, 1700030E15Rik, LOC235279, Olfr986, Zfp202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004F09.bB6Ng01-004F09.g
ACCDH841777DH841778
length1,137894
definitionDH841777|Mus musculus domesticus DNA, BAC clone: B6Ng01-004F09, 5' end.DH841778|Mus musculus domesticus DNA, BAC clone: B6Ng01-004F09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgagaactgaactgcaaagcatgagatttatattcactgaa
catcattttttttcctaacagtatattttgtaaggtactgactttaaaga
tgttggactgcttacagctaagactgctgggagtaagcagcttttggaag
atggagggaagagttttcctggtgagaaggaacaatctgtatccaaagat
ggacaaaagacaaaaagtgtttgtaatttacaaatggagttaaagattgg
tcagaaaatatgaacaaactaataaacagtatcagaaaacttttataagt
aaaacaagtatttaagggtaaactgctttagaaaatctccaagtcatacc
tgagcacattatttctactctttctaatggtcagaatttgtacagctgac
acaaatactgagggttgttacagatatagtcattgtgattagctactaaa
tgctgtcccagggtgttgctgaatctccaagttgagacataaaataaaca
taacgatccatgaaaatgcaagaagctaaaagtacctggggcaaaatctt
tacaggacagccatagttatacaagctacaattaaactgaagtgctggaa
acgaagaatgggtctcacttttgatgaataatacacaatatcagctacta
tattcagaatcacaatgaaaatatacttttggcagcatgtatcagggtag
aggaattccagtctagcaacatggctacaatgcctggaatacagacaagc
cattagtacagacatttaatcccaaacagtgaaaatagttgaaggaaaca
tccaggttagaaagtttagtctgattgagtggcatattaagtaaagaatt
tgataaagttttacagattgggatattcccaactgtcacaagaatagatg
ggaaaaagaaattatttagagataaaagcaggtggatgcgtggcaggcag
gcagatagacattttaccatgagagtttacagaggcagttgagagataac
agctagacacaggtaagacagagctagccagatatgagagagacgagata
ttacatttgctagtgttagtttgagaaaattgggcatcagtcagaagtgg
aagcatctgatcagttctattggtgaaatttggagca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttccacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagac
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggggaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccaacaatacctctcctggca
tatacccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacctagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatattttctatttctattcatttgtgtaagaatttaatgaatttatt
gttctgatggctgaatagtactccattgtataaatgtgccacattttttg
tatccactcttttgttgatggacatctgggttctttccagcatctcacta
ttataaataaggctgcgcttcataggagtaacaacaatataaaccaacta
gtatccccagagctcccatggactaaaccttgaaacaaagagtttacact
gagggacccatggctccagctgcatatatatcagaggagggacttgttgg
gtatcagtgggaggagaggccattggtcctgagaaggcttgatgccccag
tgtaagcaaggacagggaagtgtgagtgtgggtgttgttttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38998819_38999981
seq2: B6Ng01-004F09.b_48_1184 (reverse)

seq1  TGCTCAAAAATTCTCACCAATAGAACTGATTCAGATTGGCTTTTCTCACT  50
      ||||| |||  | |||||||||||||||| ||||||  ||||    ||||
seq2  TGCTCCAAA--TTTCACCAATAGAACTGA-TCAGAT--GCTT---CCACT  42

seq1  TCTGACTGAATTGCCCAATTTGTCCTCAAACTAACACTAGCAAATTGTAA  100
      |||||||||  |||||||||  | |||||||||||||||||||| |||||
seq2  TCTGACTGA--TGCCCAATT--TTCTCAAACTAACACTAGCAAA-TGTAA  87

seq1  TAATCTTCTGTCTCCTTCTCATTATCTGGCTAGCTCTGTCTTTACCTGTG  150
      | ||||   |||||  ||||| |||||||||||||||||| |||||||||
seq2  T-ATCT--CGTCTC--TCTCA-TATCTGGCTAGCTCTGTC-TTACCTGTG  130

seq1  TCTAGCTTGTTATCTTCTCAACCTGCCTCTGTAAAACTCTCATGGTAAAA  200
      |||||| ||||||| |||||| |||||||||| ||||||||||||| |||
seq2  TCTAGC-TGTTATC-TCTCAA-CTGCCTCTGT-AAACTCTCATGGT-AAA  175

seq1  ATGTCTATCTGCCTGCCTGCCACGCATCCACCTGCTTTTATCTCTAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTATCTGCCTGCCTGCCACGCATCCACCTGCTTTTATCTCTAAATA  225

seq1  ATTTCTTTTTCCCATCTATTCTTGTGACAGTTGGGAATATCCCAATCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTTTCCCATCTATTCTTGTGACAGTTGGGAATATCCCAATCTGT  275

seq1  AAAACCTTTATCAAATTCTTTACTTAATATGCCACTCAATCAGACTAAAC  350
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAA-CTTTATCAAATTCTTTACTTAATATGCCACTCAATCAGACTAAAC  324

seq1  TTTCTAACCTGGATGTTTCCTTCAACTATTTTCACTGTTTGGGATTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAACCTGGATGTTTCCTTCAACTATTTTCACTGTTTGGGATTAAAT  374

seq1  GTCTGTACTAATGGCTTGTCTGTATTCCAGGCATTGTAGCCATGTTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTACTAATGGCTTGTCTGTATTCCAGGCATTGTAGCCATGTTGCTA  424

seq1  GACTGGAATTCCTCTACCCTGATACATGCTGCCAAAAGTATATTTTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGAATTCCTCTACCCTGATACATGCTGCCAAAAGTATATTTTCATT  474

seq1  GTGATTCTGAATATAGTAGCTGATATTGTGTATTATTCATCAAAAGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCTGAATATAGTAGCTGATATTGTGTATTATTCATCAAAAGTGAG  524

seq1  ACCCATTCTTCGTTTCCAGCACTTCAGTTTAATTGTAGCTTGTATAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCTTCGTTTCCAGCACTTCAGTTTAATTGTAGCTTGTATAACTA  574

seq1  TGGCTGTCCTGTAAAGATTTTGCCCCAGGTACTTTTAGCTTCTTGCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCTGTAAAGATTTTGCCCCAGGTACTTTTAGCTTCTTGCATTT  624

seq1  TCATGGATCGTTATGTTTATTTTATGTCTCAACTTGGAGATTCAGCAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGATCGTTATGTTTATTTTATGTCTCAACTTGGAGATTCAGCAACA  674

seq1  CCCTGGGACAGCATTTAGTAGCTAATCACAATGACTATATCTGTAACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGACAGCATTTAGTAGCTAATCACAATGACTATATCTGTAACAAC  724

seq1  CCTCAGTATTTGTGTCAGCTGTACAAATTCTGACCATTAGAAAGAGTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTATTTGTGTCAGCTGTACAAATTCTGACCATTAGAAAGAGTAGA  774

seq1  AATAATGTGCTCAGGTATGACTTGGAGATTTTCTAAAGCAGTTTACCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTGCTCAGGTATGACTTGGAGATTTTCTAAAGCAGTTTACCCTT  824

seq1  AAATACTTGTTTTACTTATAAAAGTTTTCTGATACTGTTTATTAGTTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTGTTTTACTTATAAAAGTTTTCTGATACTGTTTATTAGTTTGT  874

seq1  TCATATTTTCTGACCAATCTTTAACTCCATTTGTAAATTACAAACACTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTTCTGACCAATCTTTAACTCCATTTGTAAATTACAAACACTTT  924

seq1  TTGTCTTTTGTCCATCTTTGGATACAGATTGTTCCTTCTCACCAGGAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTTGTCCATCTTTGGATACAGATTGTTCCTTCTCACCAGGAAAA  974

seq1  CTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAGCTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCTCCATCTTCCAAAAGCTGCTTACTCCCAGCAGTCTTAGCTGT  1024

seq1  AAGCAGTCCAACATCTTTAAAGTCAGTACCTTACAAAATATACTGTTAGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTCCAACATCTTTAAAGTCAGTACCTTACAAAATATACTGTTAGG  1074

seq1  AAAAAAAATGATGTTCAGTGAATATAAATCTCATGCTTTGCAGTTCAGTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATGATGTTCAGTGAATATAAATCTCATGCTTTGCAGTTCAGTT  1124

seq1  CTCAAGAGAATTC  1163
      |||||||||||||
seq2  CTCAAGAGAATTC  1137