BAC Information

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BAC

Clone NameB6Ng01-006D17
Chromosome9 (Build37)
Map Location 79,046,684 - 79,047,655
singlet/doubletsinglet
Overlap genenone
Upstream geneGsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456
Downstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a, Filip1, LOC100041218, LOC666490, Senp6, LOC100041249, Myo6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006D17.g
ACCDH843151
length1,045
definitionDH843151|Mus musculus domesticus DNA, BAC clone: B6Ng01-006D17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttccgctaaggcccaagtggggatgctgatgtctcccttggga
gaagaaagaagagagtaaagggagggagggagggaaggatatcttttcat
ttattatttgattatttcacacatgaacataatatatcttctttgtatcc
actattgtaaacagtgaaatgaagctgacaggaaatgtttctaattctaa
ctttaacactttatctagcagatcatatgggctctttattctggaaaaaa
attggggcagtcacatacatatgtgtgttttatgtttgcgtgtggtaagc
acaacccatcctgtatatgtgaatgtaggtcgcaggggggcgggggttgt
ctgatatccttttctaacactttttaccttattctcttgagacatggtct
cagtaaacctgaatcccagtcaggatacaatcttcaagaaaacaaatagc
tgtaaatatgtgaagaaagaatatcccttttctgttgcttgtagagattt
aaattgatgcagcaaaatagtatagcatcaactatcctgtgtgttaaaca
tgatctaggcaatgaattccactttcatgtaggaggtggtttagataaga
taagaaatttcctctggagtatacaaagaacaagcagctttcttaaccat
tttctgaaacactgtcacatctataggatgaaactgttcttgttgctata
aatacggttttaaagccctctagagcaacaggcattggcatcagggagtt
agacaactgttgaaataaagatggtcaaatgcacagttgattctccatgg
gtaagcgtacccattaattttttttttttttttttacatctaaaatgtgg
tttggaaacttcgttaacatgctttccatgagcgtcagtaatgaaggtgt
gacaccccaaaaccaacttcatcctctatatcgagaagaagtacaaaaga
agatgggtataaactactcaaagacactggatcaattcgcacatcacatc
cctcaaaagtctgcttactgacatgcatgaaatgattcaggaaac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_79046684_79047655
seq2: B6Ng01-006D17.g_150_1109 (reverse)

seq1  GTTTCCTGAATCATTATCATGCAAAGGATCAGTAAGGCAGCTTTTTGAGG  50
      ||||||||||||||| |||||||     ||||||| ||||  ||||||||
seq2  GTTTCCTGAATCATT-TCATGCA---TGTCAGTAA-GCAGACTTTTGAGG  45

seq1  GATGTTGATGTGGCGAATTGATCCAAGTTGTC-TTGAGTAGTTTATAACC  99
      |||| |||||| |||||||||||||   |||| ||||||||||||| |||
seq2  GATG-TGATGT-GCGAATTGATCCA--GTGTCTTTGAGTAGTTTAT-ACC  90

seq1  CATCTCTTTTTGTACTTCATCTCGAATATAGAGGATGAAGTTGGTATTTT  149
      |||||  ||||||||||| ||||| |||||||||||||||||||  ||||
seq2  CATCTTCTTTTGTACTTCTTCTCG-ATATAGAGGATGAAGTTGG--TTTT  137

seq1  GGGGTGTCAACACCTTCATTACTGACGCTCATGGAAAGCATGTTAACGAA  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGTC-ACACCTTCATTACTGACGCTCATGGAAAGCATGTTAACGAA  186

seq1  GTTTCCAAACCACATTTTAGATGT-AAAAAAAAAAAAAAAAATTAATGGG  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTTTCCAAACCACATTTTAGATGTAAAAAAAAAAAAAAAAAATTAATGGG  236

seq1  TACGCTTACCCATGGAGAATCAACTGTGCATTTGACCATCTTTATTTCAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTTACCCATGGAGAATCAACTGTGCATTTGACCATCTTTATTTCAA  286

seq1  CAGTTGTCTAACTCCTTGATGCCAATGCCTGTTGCTCTAGAGGGCTTTAA  348
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGTTGTCTAACTCCCTGATGCCAATGCCTGTTGCTCTAGAGGGCTTTAA  336

seq1  AACCGTATTTATAGCAACAAGAACAGTTTCATCCTATAGATGTGACAGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTATTTATAGCAACAAGAACAGTTTCATCCTATAGATGTGACAGTG  386

seq1  TTTCAGAAAATGGTTAAGAAAGCTGCTTGTTCTTTGTATACTCCAGAGGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAAATGGTTAAGAAAGCTGCTTGTTCTTTGTATACTCCAGAGGA  436

seq1  AATTTCTTATCTTATCTAAACCACCTCCTACATGAAAGTGGAATTCATTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTATCTTATCTAAACCACCTCCTACATGAAAGTGGAATTCATTG  486

seq1  CCTAGATCATGTTTAACACACAGGATAGTTGATGCTATACTATTTTGCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATCATGTTTAACACACAGGATAGTTGATGCTATACTATTTTGCTG  536

seq1  CATCAATTTAAATCTCTACAAGCAACAGAAAAGGGATATTCTTTCTTCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATTTAAATCTCTACAAGCAACAGAAAAGGGATATTCTTTCTTCAC  586

seq1  ATATTTACAGCTATTTGTTTTCTTGAAGATTGTATCCTGACTGGGATTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACAGCTATTTGTTTTCTTGAAGATTGTATCCTGACTGGGATTCA  636

seq1  GGTTTACTGAGACCATGTCTCAAGAGAATAAGGTAAAAAGTGTTAGAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACTGAGACCATGTCTCAAGAGAATAAGGTAAAAAGTGTTAGAAAA  686

seq1  GGATATCAGACAACCCCCGCCCCCCTGCGACCTACATTCACATATACAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCAGACAACCCCCGCCCCCCTGCGACCTACATTCACATATACAGG  736

seq1  ATGGGTTGTGCTTACCACACGCAAACATAAAACACACATATGTATGTGAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTGTGCTTACCACACGCAAACATAAAACACACATATGTATGTGAC  786

seq1  TGCCCCAATTTTTTTCCAGAATAAAGAGCCCATATGATCTGCTAGATAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAATTTTTTTCCAGAATAAAGAGCCCATATGATCTGCTAGATAAA  836

seq1  GTGTTAAAGTTAGAATTAGAAACATTTCCTGTCAGCTTCATTTCACTGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAAAGTTAGAATTAGAAACATTTCCTGTCAGCTTCATTTCACTGTT  886

seq1  TACAATAGTGGATACAAAGAAGATATATTATGTTCATGTGTGAAATAATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATAGTGGATACAAAGAAGATATATTATGTTCATGTGTGAAATAATC  936

seq1  AAATAATAAATGAAAAGATATCCT  972
      ||||||||||||||||||||||||
seq2  AAATAATAAATGAAAAGATATCCT  960