BAC Information

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BAC

Clone NameB6Ng01-007L16
Chromosome9 (Build37)
Map Location 14,240,541 - 14,419,625
singlet/doubletdoublet
Overlap geneLOC665351, EG547035, Jmjd2d, 0610040D20Rik, Amotl1
Upstream geneLOC100039758, Maml2, Mtmr2, Cep57, 2810485I05Rik, LOC665329, Sesn3, Endod1
Downstream geneEG665374, Piwil4, Fut4, 1700012B09Rik, Ankrd49, Mre11a, LOC100040259, Gpr83, Folr4, Panx1, Hephl1, 2200002K05Rik, Crsp6, 4931406C07Rik, Josd3, 5830418K08Rik, LOC100040375, LOC100039955, BC017612, Ccdc67
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007L16.bB6Ng01-007L16.g
ACCDH844210DH844211
length1,033264
definitionDH844210|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L16, 5' end.DH844211|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,240,541 - 14,241,568)(14,419,362 - 14,419,625)
sequence
gaattcactctgtagaccaggctggcctctaactcaggtctgcctgcctt
tgcctcctgagtgctggggtctgaggcatgaatcaccacaaccaggctaa
ctcaacagttcctaaacaaagcaaatagtgtatttcttcatttataagag
attacatttagatactggtactatataagaaacatttagaaaagagatag
gattaaaagaataatttcagctctgaatgatgacatacacctgtagcacc
caatgttggtattctgtctaaactccacccccacagttcctggcagcagc
caggtagtaacgagaaagtgtactgggccagctagtatgaaatcaaacag
cctctagtgggaacaaggatgattataggaaaggtagaaaagagatgcaa
gagacagatatgggagggctgcaagtcatttccacaacagccataggtgt
atttcttatagtattcttatactacagtaccatgggaagtaaagccacaa
gctagcacaaacaatttgctgaagtatacgcataagacatctgttcccat
ccaaaagcctccctattccttccacccaggtcaatagcatcttcagctcc
tcaccttgggcttcaaatgcttctccgcttattccatgcctcactcagca
ggatgggaaatctgccaacagactctgacctgccttgactctgcctggca
ggcagactttctcttttctttctcctggaatctccccctttttaatttta
ttcaagccaaacctgtctcggctattagtgcagaaagattgttcctgtct
taggcaccctctcaggaagtgtagactttacccatcactggtacatgtat
agtaccagagaaatgttagtgatttccccaaaaacagagagaagcaaatc
tgatgtaactatgtaacttacagcagtatctttactctatttgtgctagt
tcaacacccccccccccagtgtaccaccatcacacagtatgggtttcctt
ggggtaaggggggaggcttttataattaagcag
aaacgcggataggggacaaaaacaagggagccagtctccctttttggtct
cagggagacacgtcagcctgagtcccggcagtttccgaaatcccgggagg
ggcgacgggaaactggggacgggctctagggccccgcggccggggccggg
gcggggtgaagtgtagggttacagggatcagaccagcgaccctcctgggt
agcacgctggcgactgggagcgcggggcgcccagggacccggcagcgggg
tggggtgggtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_14240541_14241568
seq2: B6Ng01-007L16.b_46_1078

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTCTAACTCAGGTCTGCCTGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTCTAACTCAGGTCTGCCTGCCTT  50

seq1  TGCCTCCTGAGTGCTGGGGTCTGAGGCATGAATCACCACAACCAGGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTGAGTGCTGGGGTCTGAGGCATGAATCACCACAACCAGGCTAA  100

seq1  CTCAACAGTTCCTAAACAAAGCAAATAGTGTATTTCTTCATTTATAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAGTTCCTAAACAAAGCAAATAGTGTATTTCTTCATTTATAAGAG  150

seq1  ATTACATTTAGATACTGGTACTATATAAGAAACATTTAGAAAAGAGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTTAGATACTGGTACTATATAAGAAACATTTAGAAAAGAGATAG  200

seq1  GATTAAAAGAATAATTTCAGCTCTGAATGATGACATACACCTGTAGCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAAGAATAATTTCAGCTCTGAATGATGACATACACCTGTAGCACC  250

seq1  CAATGTTGGTATTCTGTCTAAACTCCACCCCCACAGTTCCTGGCAGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTGGTATTCTGTCTAAACTCCACCCCCACAGTTCCTGGCAGCAGC  300

seq1  CAGGTAGTAACGAGAAAGTGTACTGGGCCAGCTAGTATGAAATCAAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGTAACGAGAAAGTGTACTGGGCCAGCTAGTATGAAATCAAACAG  350

seq1  CCTCTAGTGGGAACAAGGATGATTATAGGAAAGGTAGAAAAGAGATGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGTGGGAACAAGGATGATTATAGGAAAGGTAGAAAAGAGATGCAA  400

seq1  GAGACAGATATGGGAGGGCTGCAAGTCATTTCCACAACAGCCATAGGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGATATGGGAGGGCTGCAAGTCATTTCCACAACAGCCATAGGTGT  450

seq1  ATTTCTTATAGTATTCTTATACTACAGTACCATGGGAAGTAAAGCCACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTATAGTATTCTTATACTACAGTACCATGGGAAGTAAAGCCACAA  500

seq1  GCTAGCACAAACAATTTGCTGAAGTATACGCATAAGACATCTGTTCCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCACAAACAATTTGCTGAAGTATACGCATAAGACATCTGTTCCCAT  550

seq1  CCAAAAGCCTCCCTATTCCTTCCACCCAGGTCAATAGCATCTTCAGCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGCCTCCCTATTCCTTCCACCCAGGTCAATAGCATCTTCAGCTCC  600

seq1  TCACCTTGGGCTTCAAATGCTTCTCCGCTTATTCCATGCCTCACTCAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTGGGCTTCAAATGCTTCTCCGCTTATTCCATGCCTCACTCAGCA  650

seq1  GGATGGGAAATCTGCCAACAGACTCTGACCTGCCTTGACTCTGCCTGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGAAATCTGCCAACAGACTCTGACCTGCCTTGACTCTGCCTGGCA  700

seq1  GGCAGACTTTCTCTTTTCTTTCTCCTGGAATCTCCCCCTTTTTAATTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACTTTCTCTTTTCTTTCTCCTGGAATCTCCCCCTTTTTAATTTTA  750

seq1  TTCAAGCCAAACCTGTCTCGGCTATTAGTGCAGAAAGATTGTTCCTGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCCAAACCTGTCTCGGCTATTAGTGCAGAAAGATTGTTCCTGTCT  800

seq1  TAGGCACCCTCTCAAGAAGTGTAGACTTTACCCATCACTGGTACATGTAT  850
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAGGCACCCTCTCAGGAAGTGTAGACTTTACCCATCACTGGTACATGTAT  850

seq1  AGTACCAGAGAAATGTTAGTGATTTCCCCAAAAACAGAGAGAAGCAAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCAGAGAAATGTTAGTGATTTCCCCAAAAACAGAGAGAAGCAAATC  900

seq1  TGATGTAACTATGTAACTTACAGCAGTATCTTTACTCTATTTGTGCTAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAACTATGTAACTTACAGCAGTATCTTTACTCTATTTGTGCTAGT  950

seq1  TCAACACCCCCCCCCCCAGTGTACCACCATCACACAGTAT-GGTTTCCTT  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCAACACCCCCCCCCCCAGTGTACCACCATCACACAGTATGGGTTTCCTT  1000

seq1  GGGGTA--GGGGGAGGC-TTTAT-AGTAAGCAG  1028
      ||||||  ||||||||| ||||| | |||||||
seq2  GGGGTAAGGGGGGAGGCTTTTATAATTAAGCAG  1033

seq1: chr9_14419362_14419625
seq2: B6Ng01-007L16.g_74_337 (reverse)

seq1  TCCCACCCACCCCACCCCGCTGCCGGGTCCCTGGGCGCCCCGCGCTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCCACCCCACCCCGCTGCCGGGTCCCTGGGCGCCCCGCGCTCCCA  50

seq1  GTCGCCAGCGTGCTACCCAGGAGGGTCGCTGGTCTGATCCCTGTAACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCCAGCGTGCTACCCAGGAGGGTCGCTGGTCTGATCCCTGTAACCCT  100

seq1  ACACTTCACCCCGCCCCGGCCCCGGCCGCGGGGCCCTAGAGCCCGTCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCACCCCGCCCCGGCCCCGGCCGCGGGGCCCTAGAGCCCGTCCCC  150

seq1  AGTTTCCCGTCGCCCCTCCCGGGATTTCGGAAACTGCCGGGACTCAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCCGTCGCCCCTCCCGGGATTTCGGAAACTGCCGGGACTCAGGCT  200

seq1  GACGTGTCTCCCTGAGACCAAAAAGGGAGACTGGCTCCCTTGTTTTTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGTCTCCCTGAGACCAAAAAGGGAGACTGGCTCCCTTGTTTTTGTC  250

seq1  CCCTATCCGCGTTT  264
      ||||||||||||||
seq2  CCCTATCCGCGTTT  264