BAC Information

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BAC

Clone NameB6Ng01-007M10
Chromosome9 (Build37)
Map Location 4,731,753 - 4,732,835
singlet/doubletsinglet
Overlap geneGria4
Upstream geneGucy1a2, LOC100039236, LOC384912, LOC100039253, Aasdhppt, Kbtbd3, LOC664860, 8430410K20Rik
Downstream geneEG664889, Casp1, Casp4, Casp12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007M10.bB6Ng01-007M10.g
ACCDH844244DH844245
length1,079699
definitionDH844244|Mus musculus domesticus DNA, BAC clone: B6Ng01-007M10, 5' end.DH844245|Mus musculus domesticus DNA, BAC clone: B6Ng01-007M10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaatgtgtagaagattttagtgaaggacttaaaggtgtcacaa
aaatcatatagaagttgggtttttttcccatataaataaatgttaatagg
ggaagcaacttttttccccaggaatttactacaagttcccattaattcaa
aactaattgcttgaaagtagaatactatccaaaccatgtgccattaattg
agttcctgagcttcagatacggtggaaattttatgaatgtgaattctatg
cctttcagctactttaaaagtatatacactaaaggtcctttgtagtgctt
tataaatgttcttcatgcagaaattcccttttttgcacaggcagtgcact
ttcaatcctacagatcgctgaggactgagatgacacagttggcttccatg
tgtaagtgagccatctctaagcctagtgcttctgtggtcttcattattat
ggcacagcttcttcctttaatcagcattgggttcatttttagaggaatgc
aaatttgcttgagattgtcacatgatgatacttgaagaggccttcatttt
cttgttaacctgagaggtaggttttctttgaagcttcaatttcaagtagt
aaattgttttgagagtcatataggcatggcagcaatacatatatcttaac
tgaaaataagtaataattatttttaatctatatatattttctaatttctt
ggaaaagagaagtcccatggttttactcagtgactgaattttgatacacc
cagcatttcttcacagagctactgtggtctccttaagtgcaccctttgac
tttttttttaactagatattttccttatttatatttcaaatgttattccc
ttttctggtttcccctctgaagaccccctaccccatacccctcaccaacc
cacacactcctgcttcatggccctggcattccctatactatggcatagaa
tcttcacaggaccaaggtctctcctcccattgatgacaactaggcatcct
ctgctacatatgcagctagagcatgagtccaccttggccttttctttggt
tgatggtttagttccaaggaagctctggg

gaattcacaacagaggcatctcaaatggctgagaagcacctaaagaaatg
ttcaaagttcaagtgaggaaggaggttgatatcccacagttaaaactttg
acccataattgttcctgtctgaaataagtgcagggatggaaatggggagg
tgcctgaggaaaagaaggtccgacaacaagcccaaagtgggatccagctc
aagaggaggtcccggggcctgacattaataaggctatggaggactcacaa
aaaggaacctatcattactgccctctgaaagacctaacaagcagttgaaa
aagtcagatgaagatatttgcatccaatcaatgggcagaagctgttgaac
tctgtggttgaattaaggaaaggctggaagaagatgaggaagatgttgac
catgtaggaatgccagcagtctcaattaacctggacccccaagatctctc
caacactggaccaccaaccaggcagcgtacaccagcttatacaaggcccc
cgacacatatacagaaggggactgcttggtctgggttcagccagagaaga
tgcacctaatcctcaagggactggaggccagagggagtttagagggtctg
gtttcatgggggttgggggtaggcacatccgtttggagtaaggggtgtgg
ggaggaggtatggtaatggccaactgctgttggatggacacttgtaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_4731753_4732835
seq2: B6Ng01-007M10.b_44_1122

seq1  GAATTCAAAATGTGTAGAAGATTTTAGTGAAGGACTTAAAGGTGTCACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGTGTAGAAGATTTTAGTGAAGGACTTAAAGGTGTCACAA  50

seq1  AAATCATATAGAAGTTGGGTTTTTTTCCCATATAAATAAATGTTAATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATATAGAAGTTGGGTTTTTTTCCCATATAAATAAATGTTAATAGG  100

seq1  GGAAGCAACTTTTTTCCCCAGGAATTTACTACAAGTTCCCATTAATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAACTTTTTTCCCCAGGAATTTACTACAAGTTCCCATTAATTCAA  150

seq1  AACTAATTGCTTGAAAGTAGAATACTATCCAAACCATGTGCCATTAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATTGCTTGAAAGTAGAATACTATCCAAACCATGTGCCATTAATTG  200

seq1  AGTTCCTGAGCTTCAGATACGGTGGAAATTTTATGAATGTGAATTCTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTGAGCTTCAGATACGGTGGAAATTTTATGAATGTGAATTCTATG  250

seq1  CCTTTCAGCTACTTTAAAAGTATATACACTAAAGGTCCTTTGTAGTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGCTACTTTAAAAGTATATACACTAAAGGTCCTTTGTAGTGCTT  300

seq1  TATAAATGTTCTTCATGCAGAAATTCCCTTTTTTGCACAGGCAGTGCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGTTCTTCATGCAGAAATTCCCTTTTTTGCACAGGCAGTGCACT  350

seq1  TTCAATCCTACAGATCGCTGAGGACTGAGATGACACAGTTGGCTTCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCCTACAGATCGCTGAGGACTGAGATGACACAGTTGGCTTCCATG  400

seq1  TGTAAGTGAGCCATCTCTAAGCCTAGTGCTTCTGTGGTCTTCATTATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTGAGCCATCTCTAAGCCTAGTGCTTCTGTGGTCTTCATTATTAT  450

seq1  GGCACAGCTTCTTCCTTTAATCAGCATTGGGTTCATTTTTAGAGGAATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGCTTCTTCCTTTAATCAGCATTGGGTTCATTTTTAGAGGAATGC  500

seq1  AAATTTGCTTGAGATTGTCACATGATGATACTTGAAGAGGCCTTCATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGCTTGAGATTGTCACATGATGATACTTGAAGAGGCCTTCATTTT  550

seq1  CTTGTTAACCTGAGAGGTAGGTTTTCTTTGAAGCTTCAATTTCAAGTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTAACCTGAGAGGTAGGTTTTCTTTGAAGCTTCAATTTCAAGTAGT  600

seq1  AAATTGTTTTGAGAGTCATATAGGCATGGCAGCAATACATATATCTTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTTTTGAGAGTCATATAGGCATGGCAGCAATACATATATCTTAAC  650

seq1  TGAAAATAAGTAATAATTATTTTTAATCTATATATATTTTCTAATTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAAGTAATAATTATTTTTAATCTATATATATTTTCTAATTTCTT  700

seq1  GGAAAAGAGAAGTCCCATGGTTTTACTCAGTGACTGAATTTTGATACACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGAGAAGTCCCATGGTTTTACTCAGTGACTGAATTTTGATACACC  750

seq1  CAGCATTTCTTCACAGAGCTACTGTGGTCTCCTTAAGTGCACCCTTTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTCTTCACAGAGCTACTGTGGTCTCCTTAAGTGCACCCTTTGAC  800

seq1  TTTTTTTTTAACTAGATATTTTCCTTATTTATATTTCAAATGTTATTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAACTAGATATTTTCCTTATTTATATTTCAAATGTTATTCCC  850

seq1  TTTTCTGGTTTCCCCTCTGAAGACCCCCTACCCCATACCCCTCACCAACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGTTTCCCCTCTGAAGACCCCCTACCCCATACCCCTCACCAACC  900

seq1  CACACACTCCTGCTTCATGGCCCTGGCATTCCCCTATACTATGGCATAGA  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CACACACTCCTGCTTCATGGCCCTGGCATT-CCCTATACTATGGCATAGA  949

seq1  ATCTTCACAGGACCAAGGGTCTCTCCTCCCATTGATGACAAACTAGGCCA  1000
      |||||||||||||||| |||||||||||||||||||||| ||||||| ||
seq2  ATCTTCACAGGACCAA-GGTCTCTCCTCCCATTGATGAC-AACTAGG-CA  996

seq1  TCCTCTGCTACATATGCAGCTAGAGCCATGAGTCCCACCTTGG-CTTTTC  1049
      ||||||||||||||||||||||||| ||||||| ||||||||| ||||||
seq2  TCCTCTGCTACATATGCAGCTAGAG-CATGAGT-CCACCTTGGCCTTTTC  1044

seq1  TTTGGTTGATGGTTTAG-TCCCAGGGAGCTCTGGG  1083
      ||||||||||||||||| ||| ||| |||||||||
seq2  TTTGGTTGATGGTTTAGTTCCAAGGAAGCTCTGGG  1079


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