BAC Information

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BAC

Clone NameB6Ng01-008L14
Chromosome9 (Build37)
Map Location 102,360,404 - 102,361,345
singlet/doubletsinglet
Overlap genenone
Upstream geneEphb1, 9630041A04Rik
Downstream geneKy, LOC664843, Cep63, Anapc13, Amotl2, EG434510, Ryk, Slco2a1, Rab6b, Srprb, Trf, 1300017J02Rik, Topbp1, Cdv3, Bfsp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008L14.bB6Ng01-008L14.g
ACCDH844883DH844884
length1,148939
definitionDH844883|Mus musculus domesticus DNA, BAC clone: B6Ng01-008L14, 5' end.DH844884|Mus musculus domesticus DNA, BAC clone: B6Ng01-008L14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccatgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcagctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaatttttccaattgtg
atctttccaagtccctgaccatccagccaatccattggctacagcccatg
agtcagtgtataatcgtacatctggccatttcttcttgcaaacaaactgt
aataccatgtgtactgcccgaagttctgcccactgtgaagattcccttta
cctgtgtctttcagggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctggggttggtgcctgcataacggtgcagagccatcataaacca
ggctcttagtctttctcctctttcgtcagttgatcataggaacaccccca
tgaaggttataggcgcatgctttggcagcgatggcattgtaacaggaaat
agaaacatagctttgagcaactttctcatgttaacttgcttgtgcttcag
gactgctctggccgatcacgtataaaccactttcaattggaataataaac
gctgctgtgcacgtcccacatatgaactgcagggctcgatagatacaa
gaattccagagagcaactgagttacatcaatggtgggatccaaaaggagc
gtttcataaactgggtaacaatttttcaataagggaaaataatgttttgt
ttttaatgaatgcaaattaatgattttaagtaaaatacatggttggagaa
atttgtaagattttgttattgggtctgaagagaattcaaatccctctctc
tctctctctctctctctctctctctctctcacacacacacacacacacac
acacacacatatatatatatctcaagaccaggaatcttgatgtagggaac
ggatggagggggagctggacgtccccacagagggagaaggctaggatcag
gtgataaggaggagtgtgtcacagaccgtgcagagtcttccccaaagcac
acattttccatcatatcactctatatccctcctctttgaatagttagtac
ttatcctgtatagttcatctcaagtatgacatgaccatattttttcaact
tctcaaagcatcatgggatacttttgtgaagagaaatttctagggaaaaa
aagttcagcaaatataaacgatatataagcccagattcttgatttcagct
tgacgaatgtcaaagttgctttgtggagctaccgtaggagtttctaaagc
ttctcctattttttcaaatggtctgtgaattgaatcttgggtattccaag
ttgcccccatttctgtactcacgtctaccgtaactgatgttgaagagttc
ccttgggagctggtttttgaaccacactttaagttttacagcaataaacc
attggacacacacagaaaactcacagctccacacagaggtatatcatgct
cccacaaccacctccctacccgctgctgcaccacacacatgcactatggt
aagggtccgggaaaaccttcctaaggctggatctgtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_102360404_102361345
seq2: B6Ng01-008L14.g_67_1005 (reverse)

seq1  TACACAGATCCAGGCATCAGGAAGTACTTCCAGGACCCTCGACAGTAGTG  50
      | |||||||||| || | ||||||   |||| |||||||  ||  |||||
seq2  TTCACAGATCCA-GCCTTAGGAAGGTTTTCCCGGACCCT-TACCATAGTG  48

seq1  CATGTGTGTTGGTGCAGCAGCGGGGTAGGGAGGTGGTTGTGGGAGCATGG  100
      |||||||| |||||||||||| |||||||||||||||||||||||||| |
seq2  CATGTGTG-TGGTGCAGCAGC-GGGTAGGGAGGTGGTTGTGGGAGCAT-G  95

seq1  ATATACCTCTGTGTGGAGCTGTGAGTTTTCTGTGTGTGT-CAATGGCTTA  149
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  ATATACCTCTGTGTGGAGCTGTGAGTTTTCTGTGTGTGTCCAATGGTTTA  145

seq1  TTGCTGTACAACTTAAAGTGTGGTTCAAAAACCAGCTCCCAAGGGAACTC  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTAAAACTTAAAGTGTGGTTCAAAAACCAGCTCCCAAGGGAACTC  195

seq1  TTCAACATCAGTTACGGTAGACGTGAGTACAGAAATGGGGGCAACTTGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCAGTTACGGTAGACGTGAGTACAGAAATGGGGGCAACTTGGA  245

seq1  ATACCCAAGATTCAATTCACAGACCATTTGAAAAAATAGGAGAAGCTTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAAGATTCAATTCACAGACCATTTGAAAAAATAGGAGAAGCTTTA  295

seq1  GAAACTCCTACGGTAGCTCCACAAAGCAAC-TTGACATTCGTCAAGCTGA  348
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAAACTCCTACGGTAGCTCCACAAAGCAACTTTGACATTCGTCAAGCTGA  345

seq1  AATCAAGAATCTGGGCTTATATATCGTTTATATTTGCTGAACTTTTTTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGAATCTGGGCTTATATATCGTTTATATTTGCTGAACTTTTTTTC  395

seq1  CCTAGAAATTTCTCTTCACAAAAGTATCCCATGATGCTTTGAGAAGTTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAATTTCTCTTCACAAAAGTATCCCATGATGCTTTGAGAAGTTGA  445

seq1  AAAAATATGGTCATGTCATACTTGAGATGAACTATACAGGATAAGTACTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATGGTCATGTCATACTTGAGATGAACTATACAGGATAAGTACTA  495

seq1  ACTATTCAAAGAGGAGGGATATAGAGTGATATGATGGAAAATGTGTGCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCAAAGAGGAGGGATATAGAGTGATATGATGGAAAATGTGTGCTT  545

seq1  TGGGGAAGACTCTGCACGGTCTGTGACACACTCCTCCTTATCACCTGATC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAGACTCTGCACGGTCTGTGACACACTCCTCCTTATCACCTGATC  595

seq1  CTAGCCTTCTCCCTCTGTGGGGACGTCCAGCTCCCCCTCCATCCGTTCCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTTCTCCCTCTGTGGGGACGTCCAGCTCCCCCTCCATCCGTTCCC  645

seq1  TACATCAAGATTCCTGGTCTTGAGATATATATATATGTGTGTGTGTGTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAAGATTCCTGGTCTTGAGATATATATATATGTGTGTGTGTGTGT  695

seq1  GTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  745

seq1  GGGATTTGAATTCTCTTCAGACCCAATAACAAAATCTTACAAATTTCTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTGAATTCTCTTCAGACCCAATAACAAAATCTTACAAATTTCTCC  795

seq1  AACCATGTATTTTACTTAAAATCATTAATTTGCATTCATTAAAAACAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGTATTTTACTTAAAATCATTAATTTGCATTCATTAAAAACAAAA  845

seq1  CATTATTTTCCCTTATTGAAAAATTGTTACCCAGTTTATGAAACGCTCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTCCCTTATTGAAAAATTGTTACCCAGTTTATGAAACGCTCCT  895

seq1  TTTGGATCCCACCATTGATGTAACTCAGTTGCTCTCTGGAATTC  942
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATCCCACCATTGATGTAACTCAGTTGCTCTCTGGAATTC  939