BAC Information

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BAC

Clone NameB6Ng01-009B09
Chromosome9 (Build37)
Map Location 32,330,669 - 32,472,995
singlet/doubletdoublet
Overlap geneFli1
Upstream geneEG666576, Barx2, LOC100042266, Tpi-rs4, LOC666619, LOC666622, Grit, Kcnj5, Kcnj1
Downstream geneLOC669759, LOC100041398, Ets1, LOC100041426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009B09.bB6Ng01-009B09.g
ACCDH845126DH845127
length583903
definitionDH845126|Mus musculus domesticus DNA, BAC clone: B6Ng01-009B09, 5' end.DH845127|Mus musculus domesticus DNA, BAC clone: B6Ng01-009B09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,472,407 - 32,472,995)(32,330,669 - 32,331,571)
sequence
aaaggaaacaaaagcgagtcctgaaaacagaacaacagaattcaggcaac
taggggctctggttggatctggggcaagcagtcagacttactacagacag
ggcctctggggagtctcaccctagctcaggagagggtggccttattgcca
atgagtcaggaaagaggaggagtggggaagaagcagttggtacaggtggt
tggagatgggaaaggggtgtaggaaagagagcgaagatgcctgtggagaa
taaaaggagataaaggaaagaagttccatactgtaagagggctaatccac
acgcctctgttttcccagctcatcctctatgatgctaaaccgtggttctc
aacaaccatcctaaagggtgaaaactgcacagaaggcacaaactgtttac
aaaatgaagaccgaaagcaacccttcttgggcccattggtagagtaccac
cttcctgttggacagtaaagtagcacaaatttactgagccacagacgcgg
ggctttcctcagggaacaatagcgtatggagccctgttccctgtgggggt
gctatttcaaagcgcttagttggtttctcttag
gaattctccacagagtaatggaggtagttgggtgtggtggttcatgactg
taacaggagatgttgataaaagaacaaggacttcaaggtccacatcatta
catagtgtggctgaggcctgtctgagcaacaggagactttgtctcagaaa
gaaaaccaaggtgacaatgaaaggatgaatggaagccctggtctccatgc
atacaacaaacccactgctgacttgtgaaaagaatgcatgtgagttcatc
cttccgcctcagtcgagactttaaggtgatggctttgaccataattttat
tggtattatttaaaattaaatttaattggattaaaaggtgcttcctttca
tttcaatttcatcactgaacacgccgaggcaagaaatagccaacacttta
aggctatatcttgggctctatggcaaaaactacttctgtctcaaaaataa
tccttctttgtactggtgacatctcacatctcaacatcttggctgtggcc
atcatattgaacaatgacaacaggacattttcttttttttgcacaaggtt
catttggacatagttatgataaagacaattgtcttaatcttccctagcct
tgacctctgacacagaggcaagaaggtttagaagaactaataaaagtttc
tcaactctcttctttcttttaaaaaaaaatgtttggttcatgccttttaa
tccaagagctcaggaaataggtgggatatctgatttgaggtcagcctgat
ctatatagcaagttcagaccaccagggctacagatagagacttcatctca
attcacctccctctcattaggggtaaaggcatcaccccggctctaggaaa
atttcttaaccttgaataacttaaagaaatgtgtttgacctttctgtagc
cca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_32472407_32472995
seq2: B6Ng01-009B09.b_47_635 (reverse)

seq1  CTAAGAGAAACCAACTGAGCGCTCTGAAATAGCACCCCCACAGGGTACAG  50
      |||||||||||||||| |||||| ||||||||||||||||||||| ||||
seq2  CTAAGAGAAACCAACTAAGCGCTTTGAAATAGCACCCCCACAGGGAACAG  50

seq1  GGCTCCATACGCTATTGTTCCCTGAGGAAAGCCCCGCGTCTGTGGCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCATACGCTATTGTTCCCTGAGGAAAGCCCCGCGTCTGTGGCTCAG  100

seq1  TAACTTTGTGCTACTTTACTGTCCAACAGGAAGGTGGTACTCTACCAATG  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGTGCTACTTTACTGTCCAACAGGAAGGTGGTACTCTACCAATG  150

seq1  GGCCCAAGAAGGGTTGCTTTCGGTCTTCATTTTGTAAACAGTTTGTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAGAAGGGTTGCTTTCGGTCTTCATTTTGTAAACAGTTTGTGCCT  200

seq1  TCTGTGCAGTTTTCACCCTTTAGGATGGTTGTTGAGAACCACGGTTTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCAGTTTTCACCCTTTAGGATGGTTGTTGAGAACCACGGTTTAGC  250

seq1  ATCATAGAGGATGAGCTGGGAAAACAGAGGCGTGTGGATTAGCCCTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGAGGATGAGCTGGGAAAACAGAGGCGTGTGGATTAGCCCTCTTA  300

seq1  CAGTATGGAACTTCTTTCCTTTATCTCCTTTTATTCTCCACAGGCATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGGAACTTCTTTCCTTTATCTCCTTTTATTCTCCACAGGCATCTT  350

seq1  CGCTCTCTTTCCTACACCCCTTTCCCATCTCCAACCACCTGTACCAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCTCTTTCCTACACCCCTTTCCCATCTCCAACCACCTGTACCAACTG  400

seq1  CTTCTTCCCCACTCCTCCTCTTTCCTGACTCATTGGCAATAAGGCCACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCCCACTCCTCCTCTTTCCTGACTCATTGGCAATAAGGCCACCC  450

seq1  TCTCCTGAGCTAGGGTGAGACTCCCCAGAGGCCCTGTCTGTAGTAAGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGAGCTAGGGTGAGACTCCCCAGAGGCCCTGTCTGTAGTAAGTCT  500

seq1  GACTGCTTGCCCCAGATCCAACCAGAGCCCCTAGTTGCCTGAATTCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCTTGCCCCAGATCCAACCAGAGCCCCTAGTTGCCTGAATTCTGTT  550

seq1  GTTCTGTTTTCAGGACTCGCTTTTGTTTCCTTTGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTTCAGGACTCGCTTTTGTTTCCTTTGAATTC  589

seq1: chr9_32330669_32331571
seq2: B6Ng01-009B09.g_70_972

seq1  GAATTCTCCACAGAGTAATGGAGGTAGTTGGGTGTGGTGGTTCATGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCACAGAGTAATGGAGGTAGTTGGGTGTGGTGGTTCATGACTG  50

seq1  TAACAGGAGATGTTGATAAAAGAACAAGGACTTCAAGGTCCACATCATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGAGATGTTGATAAAAGAACAAGGACTTCAAGGTCCACATCATTA  100

seq1  CATAGTGTGGCTGAGGCCTGTCTGAGCAACAGGAGACTTTGTCTCAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTGGCTGAGGCCTGTCTGAGCAACAGGAGACTTTGTCTCAGAAA  150

seq1  GAAAACCAAGGTGACAATGAAAGGATGAATGGAAGCCCTGGTCTCCATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCAAGGTGACAATGAAAGGATGAATGGAAGCCCTGGTCTCCATGC  200

seq1  ATACAACAAACCCACTGCTGACTTGTGAAAAGAATGCATGTGAGTTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACAAACCCACTGCTGACTTGTGAAAAGAATGCATGTGAGTTCATC  250

seq1  CTTCCGCCTCAGTCGAGACTTTAAGGTGATGGCTTTGACCATAATTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCGCCTCAGTCGAGACTTTAAGGTGATGGCTTTGACCATAATTTTAT  300

seq1  TGGTATTATTTAAAATTAAATTTAATTGGATTAAAAGGTGCTTCCTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTATTTAAAATTAAATTTAATTGGATTAAAAGGTGCTTCCTTTCA  350

seq1  TTTCAATTTCATCACTGAACACGCCGAGGCAAGAAATAGCCAACACTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTTCATCACTGAACACGCCGAGGCAAGAAATAGCCAACACTTTA  400

seq1  AGGCTATATCTTGGGCTCTATGGCAAAAACTACTTCTGTCTCAAAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATATCTTGGGCTCTATGGCAAAAACTACTTCTGTCTCAAAAATAA  450

seq1  TCCTTCTTTGTACTGGTGACATCTCACATCTCAACATCTTGGCTGTGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTTGTACTGGTGACATCTCACATCTCAACATCTTGGCTGTGGCC  500

seq1  ATCATATTGAACAATGACAACAGGACATTTTCTTTTTTTTGCACAAGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTGAACAATGACAACAGGACATTTTCTTTTTTTTGCACAAGGTT  550

seq1  CATTTGGACATAGTTATGATAAAGACAATTGTCTTAATCTTCCCTAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGACATAGTTATGATAAAGACAATTGTCTTAATCTTCCCTAGCCT  600

seq1  TGACCTCTGACACAGAGGCAAGAAGGTTTAGAAGAACTAAT-AAAGTTTC  649
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGACCTCTGACACAGAGGCAAGAAGGTTTAGAAGAACTAATAAAAGTTTC  650

seq1  TCAACTCTCTTCTTTCTTTTAAAAAAAAATGTATGGTTCATGCC-TTTAA  698
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  TCAACTCTCTTCTTTCTTTTAAAAAAAAATGTTTGGTTCATGCCTTTTAA  700

seq1  TCCAAGAGCTCAGGAAGTAGGT-GGATATCTGAGTTTGAGGTCAGCCTGA  747
      |||||||||||||||| ||||| |||||||||| ||||||||||||||||
seq2  TCCAAGAGCTCAGGAAATAGGTGGGATATCTGA-TTTGAGGTCAGCCTGA  749

seq1  TCTATATAGCAAGTTCAGACCAGCCAGGGCTACAGAGAGAGACTTCATCT  797
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  TCTATATAGCAAGTTCAGACCA-CCAGGGCTACAGATAGAGACTTCATCT  798

seq1  CAATTCACCTCCCTCTCATAAGGGGTAAAGGCATCAGCCACGGCTCTAGG  847
      ||||||||||||||||||| |||||||||||||||| || ||||||||||
seq2  CAATTCACCTCCCTCTCATTAGGGGTAAAGGCATCA-CCCCGGCTCTAGG  847

seq1  AAAATTTCTTAACCATGAATAACTTAAAGAGATGTGTTTGACCTTTCTGT  897
      |||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  AAAATTTCTTAACCTTGAATAACTTAAAGAAATGTGTTTGACCTTTCTGT  897

seq1  AGCCCA  903
      ||||||
seq2  AGCCCA  903