BAC Information

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BAC

Clone NameB6Ng01-009M04
Chromosome9 (Build37)
Map Location 79,048,900 - 79,050,097
singlet/doubletsinglet
Overlap genenone
Upstream geneGsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456
Downstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a, Filip1, LOC100041218, LOC666490, Senp6, LOC100041249, Myo6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009M04.bB6Ng01-009M04.g
ACCDH845617DH845618
length1,1751,174
definitionDH845617|Mus musculus domesticus DNA, BAC clone: B6Ng01-009M04, 5' end.DH845618|Mus musculus domesticus DNA, BAC clone: B6Ng01-009M04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaggctactgcctgaattgtggtttaaatttccaggggagatc
attggtatcatcttcctatagtcccacacacagtgggccattaccaggaa
taccctctagaggggaagtcaaaggctcacagaaaaagtataaaaggaaa
gggaaaagtgtaaataaagtctggaatggaaacagaaagacagagccgct
gttcagagtagacctctgaggaccaggtgaataatctggagtaaagaggg
caaggagcagtgattcatggggtaaatttagtggtgttggctttggggtc
atgggatagactgatgagatgcaactacgggatctctacttcattacata
aaagtatatacttcatgagcaaagaacaggtcttcattttctacaagctg
caaatgtaaatgttaggcaaccatctaccaattccaaagattcacaaact
tctttctacatcaaccttgatcatattttagggtgtgaaaatatgtattt
cattacaatctgagtagagaatgagctaaaaaagtcatcacttttgaaaa
agaaagcacaaacctctgaaggaaaaaatctgttatttcccttaatcccc
taatggtaaggtttaaacaggctctcagaaccatcattgatcagaaccat
ctgacagtggtaagtgggtcaagtcttaactggcccactttgcttgtcag
ttcacacagtggagcatgtgagtgagtgagcctgctggaggctcagcttt
aattctcttaaaggactcacctataggcatggaggcaagaacagctggcc
ctttcatatcaggaaggatctactccaacagatgcaataatgggggcctt
gtggtcgctgaaggaagaggcatcttcccccttctgtgagtcctctggtt
attttagtgagttcttcagactgtgattcagggcttttctggtgttttat
ttagaaataccagatgttacactctcagcagccatggaagaatgtgggtg
acgtttacagtgaaaagcagattcttttttatcagaaacggatagcactt
gcttaataaattagatattaaagcagaaacatttgacaccttatagatga
atagatcatgcaaataagtggtaattggtcagcaatcagattcagtagca
aaggctgatctgaatttccataccc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaatatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcaaag
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagaagaagtacccaaggagctaaaggatctgcagcccta
taggtggaacaacattatgaactaccagtaccctgagctctgactctagc
tgcattgtatcaaagatggcctagtcggcatcactggaaaggaagtccat
ggaccgctaacttttaatactccagtacagggaatgtccagggtccaaaa
gggggaatggtgtgtgataggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_79048900_79050097
seq2: B6Ng01-009M04.b_48_1222

seq1  GAATTCAAAGGCTACTGCCTGAATTGTGGTTTAAATTTCCAGGGGAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGCTACTGCCTGAATTGTGGTTTAAATTTCCAGGGGAGATC  50

seq1  ATTGGTATCATCTTCCTATAGTCCCACACACAGTGGGCCATTACCAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTATCATCTTCCTATAGTCCCACACACAGTGGGCCATTACCAGGAA  100

seq1  TACCCTCTAGAGGGGAAGTCAAAGGCTCACAGAAAAAGTATAAAAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCTAGAGGGGAAGTCAAAGGCTCACAGAAAAAGTATAAAAGGAAA  150

seq1  GGGAAAAGTGTAAATAAAGTCTGGAATGGAAACAGAAAGACAGAGCCGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGTGTAAATAAAGTCTGGAATGGAAACAGAAAGACAGAGCCGCT  200

seq1  GTTCAGAGTAGACCTCTGAGGACCAGGTGAATAATCTGGAGTAAAGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAGTAGACCTCTGAGGACCAGGTGAATAATCTGGAGTAAAGAGGG  250

seq1  CAAGGAGCAGTGATTCATGGGGTAAATTTAGTGGTGTTGGCTTTGGGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGCAGTGATTCATGGGGTAAATTTAGTGGTGTTGGCTTTGGGGTC  300

seq1  ATGGGATAGACTGATGAGATGCAACTACGGGATCTCTACTTCATTACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATAGACTGATGAGATGCAACTACGGGATCTCTACTTCATTACATA  350

seq1  AAAGTATATACTTCATGAGCAAAGAACAGGTCTTCATTTTCTACAAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATATACTTCATGAGCAAAGAACAGGTCTTCATTTTCTACAAGCTG  400

seq1  CAAATGTAAATGTTAGGCAACCATCTACCAATTCCAAAGATTCACAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTAAATGTTAGGCAACCATCTACCAATTCCAAAGATTCACAAACT  450

seq1  TCTTTCTACATCAACCTTGATCATATTTTAGGGTGTGAAAATATGTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTACATCAACCTTGATCATATTTTAGGGTGTGAAAATATGTATTT  500

seq1  CATTACAATCTGAGTAGAGAATGAGCTAAAAAAGTCATCACTTTTGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAATCTGAGTAGAGAATGAGCTAAAAAAGTCATCACTTTTGAAAA  550

seq1  AGAAAGCACAAACCTCTGAAGGAAAAAATCTGTTATTTCCCTTAATCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCACAAACCTCTGAAGGAAAAAATCTGTTATTTCCCTTAATCCCC  600

seq1  TAATGGTAAGGTTTAAACAGGCTCTCAGAACCATCATTGATCAGAACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTAAGGTTTAAACAGGCTCTCAGAACCATCATTGATCAGAACCAT  650

seq1  CTGACAGTGGTAAGTGGGTCAAGTCTTAACTGGCCCACTTTGCTTGTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGTGGTAAGTGGGTCAAGTCTTAACTGGCCCACTTTGCTTGTCAG  700

seq1  TTCACACAGTGGAGCATGTGAGTGAGTGAGCCTGCTGGAGGCTCAGCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACAGTGGAGCATGTGAGTGAGTGAGCCTGCTGGAGGCTCAGCTTT  750

seq1  AATTCTCTTAAAGGACTCACCTATAGGCATGGAGGCAAGAACAGCTGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTTAAAGGACTCACCTATAGGCATGGAGGCAAGAACAGCTGGCC  800

seq1  CTTTCATATCAGGAAGGATCTACTCCAACAGATGCAATAATGGGGGCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATATCAGGAAGGATCTACTCCAACAGATGCAATAATGGGGGCCTT  850

seq1  GTGGTCGCTGAAGGAAGAGGCATCTTCCCCCTTCTGTGAAGTCCTCTGGT  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTGGTCGCTGAAGGAAGAGGCATCTTCCCCCTTCTGTG-AGTCCTCTGGT  899

seq1  TATTTTAGTGAGTTCTTCAGACTGTGATTCAGGGCTTTTCTGGTGTTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTGAGTTCTTCAGACTGTGATTCAGGGCTTTTCTGGTGTTTTA  949

seq1  TTTAGAAATACCAGATGTTACACTCTCAGCAGCCATGGAAGAATGTGGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAATACCAGATGTTACACTCTCAGCAGCCATGGAAGAATGTGGGT  999

seq1  GACGTTTACAGTGGAAAAGCAGAATTCTTTTTATCAAGAAAACGAATAAG  1050
      |||||||||||| |||||||||| |  |||||||||   ||||| || ||
seq2  GACGTTTACAGT-GAAAAGCAGATTCTTTTTTATCA--GAAACGGAT-AG  1045

seq1  CACTTGCTTAATAAAATTAGATAATTAAAAGCAGAAAACATTTGACACCT  1100
      |||||||||||| ||||||||||  | ||||||| |||||||||||||||
seq2  CACTTGCTTAAT-AAATTAGATA--TTAAAGCAG-AAACATTTGACACCT  1091

seq1  TATTAGAATGAAATAAGATCATGCAATAAAAGTTGTTTATTTGGTCAGCA  1150
      || ||| |||||   ||||||||||| | |||| |  || ||||||||||
seq2  TA-TAG-ATGAA--TAGATCATGCAA-ATAAGTGG--TAATTGGTCAGCA  1134

seq1  TATAAAAAATTCCAAGTAGCAATAGGCTGACTCTGATTTTCCATACCC  1198
         |  | ||||  |||||||| ||||||| ||||| |||||||||||
seq2  ---ATCAGATTC--AGTAGCAA-AGGCTGA-TCTGAATTTCCATACCC  1175