BAC Information

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BAC

Clone NameB6Ng01-014C09
Chromosome9 (Build37)
Map Location 38,075,490 - 38,184,280
singlet/doubletdoublet
Overlap geneOlfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899
Upstream geneCcdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143
Downstream geneOlfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014C09.bB6Ng01-014C09.g
ACCDH848775DH848776
length1,1211,117
definitionDH848775|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C09, 5' end.DH848776|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,075,490 - 38,076,621)(38,183,159 - 38,184,280)
sequence
gaattcttttctataattctaataaattttctcaaaaatcttgaccttga
ggctttgaagattcaaataagaaaactattttctttttttgtatgagtaa
aagaatctttgtcaaagagtaaccatgacattttcccaagggaacttctt
gtagcaagtgaggtacattttctgcactgattgcaattacctgcttcatt
attaacaacttgggccctctgtgcacagcgaacaggaagataccatgaac
tccgatgtcagggaaggctccagatgaatcaaggtgagcactggataatc
tttattttgacatttttgtcttcattcccactgctatataaatcataaat
tctgaaaaaagtgcatgcactgcacttttcagccttaaatgttagtaaac
actagaagaaaggaaagatattttatttgaggaaattaaggttccccagc
atctttctgaagtgttatacacaagatggaagaggagagaggaaatagga
attccttaagattacatacaatttaggcataaaatccaataacttttgct
ctgctcttggagtgaaaaatagtttatgtgttaatactccctctacactt
attcttacagatgtcactcaatgcacaaaagactatggaaaatgattctt
ctgtgtctgagtttattcttatgggactgacagaccaacctgagctccag
ctgcccttatttgttctgttcttggtgaactacacagtcactgtgatggg
aaatttgagcttaatgaatctcatttgcctaaactcaaaccttcacaccc
ccatgtactttttcatcttcaacctgtccttcattgacttctgttattca
atggtctttacccccaaaatgctgatgggctttgttgtagagaagaacat
catctccttcagaggatgcatgactcagctgtttttctctattttttgtg
actctgagagtatgtgctgacagcatggcctatgatcgctatgtggcatc
tgtcagcactgctctacaagctgtatgtccacctgcatctgctttctatt
gatattttgtacttaattgatgggcctgtaatgccttatccattacaggg
tttatgataaggctccacttt
gaattcttatacatgtatgaaagggtgctgataagtattagctaccctat
attacacattcttattcagataattttttctcaaatttggcactatttgc
atttgtagtaggtatcttgtggctccttagtatggagtggagcagaaaca
gtatctatggactcctcctcctccatgttaatatcatctccccttatcac
atacaccagttgatacccaaaaggatttctgtaactattttaagacattc
tatgagtactactgtagataagaaaattaggtgccaaagcaaggtacacc
attagggtgagtactttgaaagtgagaacttctaagagatgatacattta
aatcaatttctaagaaaaattgccaagctgttctctgctaggtgtactta
aaaggtgtcattttttaacagtatattaaaaaaatatcaaagagttaact
gtttgtatgagttaaccatttatagatactttgcatgttttctggcctat
caatagaccaacttatcatggaccacttttattgttgagagatgacaaag
tttctacttattcttaattaaattctaagagatgatattttatatttgat
gtaagtgatattatgaaataaattatttgtgccatataaatgtgttaagt
ttatataaaacaatttaactagttttatatgaatatgacatgtacttttt
acttgggttctggagatgaaacctctcaaattgaactctgtccctagctg
tgatttacttatctattttaattttttgtagactttgtagtgtattgaaa
caatttcttttttaaaatatataaagattacatttttcacttctcttcta
ctccaatcagttcctcctgtcacatctagtcctgttccttagatctagat
ccactccctttctgtctctcattggagacaaatatgcttctagaaaataa
cagcaaatgtagatattagatcaaacaacaacaaacaaccgaacaaagcc
tccattcaagtttcacatccaactacaggagaaaaagagaccaagagaag
tcgaagatcttttcagttccacattccgggatccttaaaaattcctgaac
tggaaagcctagaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38075490_38076621
seq2: B6Ng01-014C09.b_48_1168

seq1  GAATTCTTTTCTATAATTCTAATAAATTTTCTCAAAAATCTTGACCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTATAATTCTAATAAATTTTCTCAAAAATCTTGACCTTGA  50

seq1  GGCTTTGAAGATTCAAATAAGAAAACTATTTTCTTTTTTTGTATGAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGAAGATTCAAATAAGAAAACTATTTTCTTTTTTTGTATGAGTAA  100

seq1  AAGAATCTTTGTCAAAGAGTAACCATGACATTTTCCCAAGGGAACTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCTTTGTCAAAGAGTAACCATGACATTTTCCCAAGGGAACTTCTT  150

seq1  GTAGCAAGTGAGGTACATTTTCTGCACTGATTGCAATTACCTGCTTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAGTGAGGTACATTTTCTGCACTGATTGCAATTACCTGCTTCATT  200

seq1  ATTAACAACTTGGGCCCTCTGTGCACAGCGAACAGGAAGATACCATGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACAACTTGGGCCCTCTGTGCACAGCGAACAGGAAGATACCATGAAC  250

seq1  TCCGATGTCAGGGAAGGCTCCAGATGAATCAAGGTGAGCACTGGATAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATGTCAGGGAAGGCTCCAGATGAATCAAGGTGAGCACTGGATAATC  300

seq1  TTTATTTTGACATTTTTGTCTTCATTCCCACTGCTATATAAATCATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTGACATTTTTGTCTTCATTCCCACTGCTATATAAATCATAAAT  350

seq1  TCTGAAAAAAGTGCATGCACTGCACTTTTCAGCCTTAAATGTTAGTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAAAGTGCATGCACTGCACTTTTCAGCCTTAAATGTTAGTAAAC  400

seq1  ACTAGAAGAAAGGAAAGATATTTTATTTGAGGAAATTAAGGTTCCCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAGAAAGGAAAGATATTTTATTTGAGGAAATTAAGGTTCCCCAGC  450

seq1  ATCTTTCTGAAGTGTTATACACAAGATGGAAGAGGAGAGAGGAAATAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTGAAGTGTTATACACAAGATGGAAGAGGAGAGAGGAAATAGGA  500

seq1  ATTCCTTAAGATTACATACAATTTAGGCATAAAATCCAATAACTTTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTAAGATTACATACAATTTAGGCATAAAATCCAATAACTTTTGCT  550

seq1  CTGCTCTTGGAGTGAAAAATAGTTTATGTGTTAATACTCCCTCTACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTGGAGTGAAAAATAGTTTATGTGTTAATACTCCCTCTACACTT  600

seq1  ATTCTTACAGATGTCACTCAATGCACAAAAGACTATGGAAAATGATTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTACAGATGTCACTCAATGCACAAAAGACTATGGAAAATGATTCTT  650

seq1  CTGTGTCTGAGTTTATTCTTATGGGACTGACAGACCAACCTGAGCTCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTGAGTTTATTCTTATGGGACTGACAGACCAACCTGAGCTCCAG  700

seq1  CTGCCCTTATTTGTTCTGTTCTTGGTGAACTACACAGTCACTGTGATGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTTATTTGTTCTGTTCTTGGTGAACTACACAGTCACTGTGATGGG  750

seq1  AAATTTGAGCTTAATGAATCTCATTTGCCTAAACTCAAACCTTCACACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGAGCTTAATGAATCTCATTTGCCTAAACTCAAACCTTCACACCC  800

seq1  CCATGTACTTTTTCATCTTCAACCTGTCCTTCATTGACTTCTGTTATTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTACTTTTTCATCTTCAACCTGTCCTTCATTGACTTCTGTTATTCA  850

seq1  ATGGTCTTTACCCCCAAAATGCTGATGGGCTTTGTTGTAGAGAAGAACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTTTACCCCCAAAATGCTGATGGGCTTTGTTGTAGAGAAGAACAT  900

seq1  CATCTCCTTCAGAGGATGCATGACTCAGCTGTTTTTCTTCTTATTTTTTG  950
      ||||||||||||||||||||||||||||||||||||||   |||||||||
seq2  CATCTCCTTCAGAGGATGCATGACTCAGCTGTTTTTCT--CTATTTTTTG  948

seq1  TGAACTCTGAGAGTTATGTGCTGACAGCAATGGCCTATGATCGCTATGTG  1000
      || |||||||||| |||||||||||||| |||||||||||||||||||||
seq2  TG-ACTCTGAGAG-TATGTGCTGACAGC-ATGGCCTATGATCGCTATGTG  995

seq1  GCCATCTGTCAGCCACTGCTCTACAAAGCTGTTATGT-CACCTGGCATCT  1049
      | |||||||||| ||||||||||| |||||| ||||| ||||| ||||||
seq2  G-CATCTGTCAG-CACTGCTCTAC-AAGCTG-TATGTCCACCT-GCATCT  1040

seq1  GCTTTCTATTGATATTTTGTACTTATTTGATGGGGCTTGTTAGTGCCTTA  1099
      ||||||||||||||||||||||||| |||||||| ||   || |||||||
seq2  GCTTTCTATTGATATTTTGTACTTAATTGATGGGCCT--GTAATGCCTTA  1088

seq1  TTCCATACAGGTTTTATGATAAGGCTCAACTTT  1132
      | |  |||||| ||||||||||||||| |||||
seq2  TCCATTACAGGGTTTATGATAAGGCTCCACTTT  1121

seq1: chr9_38183159_38184280
seq2: B6Ng01-014C09.g_68_1184 (reverse)

seq1  ATATTCTA-GCTTT-CAGTTCAGTATTTTTATAGGATCACTGAATGTGTA  48
      |||||||| ||||| |||||||| | ||||  |||||| | ||||||| |
seq2  ATATTCTAGGCTTTCCAGTTCAGGAATTTTTAAGGATCCCGGAATGTGGA  50

seq1  ACTGAATAGATCTCTGACTTCTCTTGGGTCTCTTTTTCTCCTGTTAGTTT  98
      |||||| ||||||  |||||||||| ||||||||||||||||| ||| ||
seq2  ACTGAAAAGATCTTCGACTTCTCTT-GGTCTCTTTTTCTCCTG-TAG-TT  97

seq1  GGATTGTTGAACTTTGATGTGATGCTTTTTGTTCGTTTGTTTGTTTGTTT  148
      ||| |||  |||||  ||| || ||  |||||||| |||||||||   ||
seq2  GGA-TGTGAAACTTGAATG-GAGGC--TTTGTTCGGTTGTTTGTT--GTT  141

seq1  GTTTGATCTTAATATCTACATTTGCTGTTATTTCTTAGAAGCATATTTGT  198
      |||||||| ||||||||||||||||||||||||  |||||||||||||||
seq2  GTTTGATC-TAATATCTACATTTGCTGTTATTTTCTAGAAGCATATTTGT  190

seq1  CTCCAATGAGAGACAGAAAGGGAGTGGATCTAGATCTAAGGGACAGGACT  248
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCCAATGAGAGACAGAAAGGGAGTGGATCTAGATCTAAGGAACAGGACT  240

seq1  AGATGTGACAGGAGGAACTGATTGGAGTAG-AGAGAAGTG-AAAATGTAA  296
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  AGATGTGACAGGAGGAACTGATTGGAGTAGAAGAGAAGTGAAAAATGTAA  290

seq1  TCTTTATATATTTT-AAAAAGAAATTGTTTCAATACACTACAAAGTCTAC  345
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTTTATATATTTTAAAAAAGAAATTGTTTCAATACACTACAAAGTCTAC  340

seq1  AAAAAATTAAAATAGATAAGTAAATCACAGCTAGGGACAGAGTTCAATTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTAAAATAGATAAGTAAATCACAGCTAGGGACAGAGTTCAATTT  390

seq1  GAGAGGTTTCATCTCCAGAACCCAAGTAAAAAGTACATGTCATATTCATA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTTTCATCTCCAGAACCCAAGTAAAAAGTACATGTCATATTCATA  440

seq1  TAAAACTAGTTAAATTGTTTTATATAAACTTAACACATTTATATGGCACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTAGTTAAATTGTTTTATATAAACTTAACACATTTATATGGCACA  490

seq1  AATAATTTATTTCATAATATCACTTACATCAAATATAAAATATCATCTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTATTTCATAATATCACTTACATCAAATATAAAATATCATCTCT  540

seq1  TAGAATTTAATTAAGAATAAGTAGAAACTTTGTCATCTCTCAACAATAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTAATTAAGAATAAGTAGAAACTTTGTCATCTCTCAACAATAAA  590

seq1  AGTGGTCCATGATAAGTTGGTCTATTGATAGGCCAGAAAACATGCAAAGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCCATGATAAGTTGGTCTATTGATAGGCCAGAAAACATGCAAAGT  640

seq1  ATCTATAAATGGTTAACTCATACAAACAGTTAACTCTTTGATATTTTTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAAATGGTTAACTCATACAAACAGTTAACTCTTTGATATTTTTTT  690

seq1  AATATACTGTTAAAAAATGACACCTTTTAAGTACACCTAGCAGAGAACAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTGTTAAAAAATGACACCTTTTAAGTACACCTAGCAGAGAACAG  740

seq1  CTTGGCAATTTTTCTTAGAAATTGATTTAAATGTATCATCTCTTAGAAGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAATTTTTCTTAGAAATTGATTTAAATGTATCATCTCTTAGAAGT  790

seq1  TCTCACTTTCAAAGTACTCACCCTAATGGTGTACCTTGCTTTGGCACCTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTTCAAAGTACTCACCCTAATGGTGTACCTTGCTTTGGCACCTA  840

seq1  ATTTTCTTATCTACAGTAGTACTCATAGAATGTCTTAAAATAGTTACAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTATCTACAGTAGTACTCATAGAATGTCTTAAAATAGTTACAGA  890

seq1  AATCCTTTTGGGTATCAACTGGTGTATGTGATAAGGGGAGATGATATTAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTTGGGTATCAACTGGTGTATGTGATAAGGGGAGATGATATTAA  940

seq1  CATGGAGGAGGAGGAGTCCATAGATACTGTTTCTGCTCCACTCCATACTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGAGGAGGAGTCCATAGATACTGTTTCTGCTCCACTCCATACTA  990

seq1  AGGAGCCACAAGATACCTACTACAAATGCAAATAGTGCCAAATTTGAGAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCACAAGATACCTACTACAAATGCAAATAGTGCCAAATTTGAGAA  1040

seq1  AAAATTATCTGAATAAGAATGTGTAATATAGGGTAGCTAATACTTATCAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATCTGAATAAGAATGTGTAATATAGGGTAGCTAATACTTATCAG  1090

seq1  CACCCTTTCATACATGTATAAGAATTC  1122
      |||||||||||||||||||||||||||
seq2  CACCCTTTCATACATGTATAAGAATTC  1117