BAC Information

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BAC

Clone NameB6Ng01-014G18
Chromosome9 (Build37)
Map Location 99,703,496 - 99,704,574
singlet/doubletsinglet
Overlap genenone
Upstream geneEG623166, EG623186, 2410012M07Rik, LOC546155, LOC100040370, 7420426K07Rik, LOC100040380, LOC667347, Foxl2os, Foxl2, Faim, Gm1123, Pik3cb, LOC100040442, LOC100040757, EG623459, Cep70, D9Ertd280e, Mras, LOC623534, Armc8, Dbr1, A4gnt, Dzip1l, Cldn18, EG667429
Downstream geneSox14, LOC667456, 4930519F24Rik, LOC100040590, Il20rb, Nck1, LOC633385, Tmem22, LOC667486, Stag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014G18.bB6Ng01-014G18.g
ACCDH848972DH848973
length1,0771,195
definitionDH848972|Mus musculus domesticus DNA, BAC clone: B6Ng01-014G18, 5' end.DH848973|Mus musculus domesticus DNA, BAC clone: B6Ng01-014G18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgaaaggctttcagagacctcagcagtggcaaggacagggac
taggtttccttagggccgttagactgctaacgcccttcacttcctccagc
ttgtaagaatataggatcatttaaggtcaaatttcagaaccttaaaataa
ttcagattctacctctcaacctactaccctcatatagcaccaagagagtc
cccaactgcactccccgttacctggagtcattcataggaatgggagacta
gttgtgacatgggtagataacccaagttggtgtccaccaagttctaaacc
aaatgccagtaatcaaggtgggcaaaacgtgactccagtcttagagtcca
ccaggcttacacgtggcaggggtggaaggggaagttgcaagatcaaaggg
agagaaaaaaatcgccaacctataattctctggtatctatgatgctgtct
tcttttacatgctcacctagcattttaagtcctgttatttaacaggctgg
gaattcatggggccaagtatttattgcaatatgcaaattttatgtgcgta
acctgtgcagctgggaataggtattttcttaaagcattgggcaatcctcg
aggaaaagactctaaatcacttccctctcaggaattctacttcaacaaaa
ggattcaggaagaactccagccagaggcacagaggaccagggatatagcg
tggggacaagatcctcttttgttcacggatctcagtgtttgcttgctaag
cgtctcctctacataaagcttatgtcctgggtgcaggacaccgatgtgat
ccaaatggatgtgatgggcagttaaactaggaaaaccactcactgggcta
ccgtggggggatggatgagcacataagaatcatataacaaggtaaccttc
atagagcagggggggagcatcgttcaaggctgacgagagatgcacaggga
gagccctatgaaaagagtagaggagattgtgttcaaagaactgtatgcac
aaatgcccagaagcagaaaagaacacgcatcagggactttatgattctgg
gttacgagtagaaaagcagaggaagag
gaattcaaaatgaaactaaacaaaaaaaaatgaaacaactcaaccaataa
atggattaagaatctgaatatatatgtcttgagaaatgaaattcaagtgt
ctgataaactcttgaaagatgcccaccctcactagacatcaaaaaataaa
taagccgggcggtggtggcgcacgcctttaatcccagcacttgggaggca
gaggcaggcggatttctgagttcgaggccagcctggtctacaaagtgagt
ttcaggacagccagggctatacagagaaaccctgtctcgaaaaaaccaaa
ccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataattaaaattac
attaggattccatctcacctcagttagaagggcagtttttaagaaaacag
caatgatcctggcaaggttgagggtgaaaaagagctcttacattgtacaa
atgcaaattagtcctgtcagtatggaaatcagcatgtgggggcctcaaaa
acctgtaagtaagcccatgaatcataactgttcttgggtatttacctaaa
ggataacatctcagaaatacctgtacttccatgtttactgcaatgctgtt
cattaaatatatatatatatacttgcaactaactcaggtgtcccaaacca
gaggaatgggtaaagaaaagataatgaatgtttaggcacaatggatttct
tctcagccataaagaaaaacaaatttaaccaggtgtctgtatagaatcat
gtatgtctattatttaaagggagatggggaaatgtctagtgaaacaaaga
agataaccaggggtgaaaagattatgacgtcaccagcttgacttgttccc
ccatcccaccctttttagtttctggttgtcatactaaccacccctggccc
ctacccaggacaccccgcagaatagtgggtctcctctcagttgccaattc
attctctgagtctgctgttctgctgcaaacatcagatccatgggtttctt
tttatctacagtgccgtgctgagtacggtgctgaccaactgtgcttctta
tatatcctctccctcacctccttgctgccagacaaggtcaataggaacag
ctctggccaaacctctgaacgacgcatcaagtgacttgcataccctcaag
tacttatcactctcccaagcttcatcgctcgggagacacagatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_99703496_99704574
seq2: B6Ng01-014G18.b_47_1123

seq1  GAATTCAGTGAAAGGCTTTCAGAGACCTCAGCAGTGGCAAGGACAGGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAAAGGCTTTCAGAGACCTCAGCAGTGGCAAGGACAGGGAC  50

seq1  TAGGTTTCCTTAGGGCCGTTAGACTGCTAACGCCCTTCACTTCCTCCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTCCTTAGGGCCGTTAGACTGCTAACGCCCTTCACTTCCTCCAGC  100

seq1  TTGTAAGAATATAGGATCATTTAAGGTCAAATTTCAGAACCTTAAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGAATATAGGATCATTTAAGGTCAAATTTCAGAACCTTAAAATAA  150

seq1  TTCAGATTCTACCTCTCAACCTACTACCCTCATATAGCACCAAGAGAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTCTACCTCTCAACCTACTACCCTCATATAGCACCAAGAGAGTC  200

seq1  CCCAACTGCACTCCCCGTTACCTGGAGTCATTCATAGGAATGGGAGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTGCACTCCCCGTTACCTGGAGTCATTCATAGGAATGGGAGACTA  250

seq1  GTTGTGACATGGGTAGATAACCCAAGTTGGTGTCCACCAAGTTCTAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGACATGGGTAGATAACCCAAGTTGGTGTCCACCAAGTTCTAAACC  300

seq1  AAATGCCAGTAATCAAGGTGGGCAAAACGTGACTCCAGTCTTAGAGTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCAGTAATCAAGGTGGGCAAAACGTGACTCCAGTCTTAGAGTCCA  350

seq1  CCAGGCTTACACGTGGCAGGGGTGGAAGGGGAAGTTGCAAGATCAAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTTACACGTGGCAGGGGTGGAAGGGGAAGTTGCAAGATCAAAGGG  400

seq1  AGAGAAAAAAATCGCCAACCTATAATTCTCTGGTATCTATGATGCTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAAAATCGCCAACCTATAATTCTCTGGTATCTATGATGCTGTCT  450

seq1  TCTTTTACATGCTCACCTAGCATTTTAAGTCCTGTTATTTAACAGGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTACATGCTCACCTAGCATTTTAAGTCCTGTTATTTAACAGGCTGG  500

seq1  GAATTCATGGGGCCAAGTATTTATTGCAATATGCAAATTTTATGTGCGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGGGCCAAGTATTTATTGCAATATGCAAATTTTATGTGCGTA  550

seq1  ACCTGTGCAGCTGGGAATAGGTATTTTCTTAAAGCATTGGGCAATCCTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGCAGCTGGGAATAGGTATTTTCTTAAAGCATTGGGCAATCCTCG  600

seq1  AGGAAAAGACTCTAAATCACTTCCCTCTCAGGAATTCTACTTCAACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGACTCTAAATCACTTCCCTCTCAGGAATTCTACTTCAACAAAA  650

seq1  GGATTCAGGAAGAACTCCAGCCAGAGGCACAGAGGACCAGGGATATAGCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAGGAAGAACTCCAGCCAGAGGCACAGAGGACCAGGGATATAGCG  700

seq1  T-GGGACAAGATCCTCTTTTGTTCACGGATCTCAGTGTTTGCTTGCTAAG  749
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACAAGATCCTCTTTTGTTCACGGATCTCAGTGTTTGCTTGCTAAG  750

seq1  CGTCTCCTCTACATAAAGCTTATGTCCTGGGTGCAGGACACCGATGTGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCTCTACATAAAGCTTATGTCCTGGGTGCAGGACACCGATGTGAT  800

seq1  CCAAATGGATGTGATGGGCAGTTAAACTAGGAAAACCACTCACTGGGCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGGATGTGATGGGCAGTTAAACTAGGAAAACCACTCACTGGGCTA  850

seq1  CCGT-GGGGGATGGATGAGCACAT-AGAATCATATAACAAGGTAACC-TC  896
      |||| ||||||||||||||||||| |||||||||||||||||||||| ||
seq2  CCGTGGGGGGATGGATGAGCACATAAGAATCATATAACAAGGTAACCTTC  900

seq1  ATAGAGCA--GGGGGAGCATCGTTCAAGGCTGACGAGAGATGCACAGGGA  944
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCAGGGGGGGAGCATCGTTCAAGGCTGACGAGAGATGCACAGGGA  950

seq1  GAGCCCTATGAAAAGAGTAGAGGAGA-TGTGTTCAAAGAACTGTATGCAC  993
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAGCCCTATGAAAAGAGTAGAGGAGATTGTGTTCAAAGAACTGTATGCAC  1000

seq1  AAAGGCCCAGAGGCAGAAAAGAACACGCAATCAGGGAACTTTATGAGTCT  1043
      ||| ||||||| |||||||||||||||| ||||||| ||||||||| || 
seq2  AAATGCCCAGAAGCAGAAAAGAACACGC-ATCAGGG-ACTTTATGATTC-  1047

seq1  TGGGTTACCGAAGTAGAGACAGCCAGGAAGGAAGAG  1079
      ||||||||   |||||| | || |||  ||||||||
seq2  TGGGTTAC--GAGTAGA-AAAG-CAG--AGGAAGAG  1077