BAC Information

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BAC

Clone NameB6Ng01-014N18
Chromosome9 (Build37)
Map Location 22,808,184 - 22,945,862
singlet/doubletdoublet
Overlap genenone
Upstream genePrkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, Bbs9, LOC100040805
Downstream geneBmper, LOC100040866, LOC100040878, LOC100040893, Npsr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014N18.bB6Ng01-014N18.g
ACCDH849282DH849283
length1,157327
definitionDH849282|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N18, 5' end.DH849283|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,944,678 - 22,945,862)(22,808,184 - 22,808,510)
sequence
gaattcaccaggctggcctcaaaccaccgtgtaagagctagtattgaaga
tgtgcaccaacacgctcagcataaacctgtccttggaagtttatctcatt
gggtttttcacagtggctactacatacatagatgactgccacatcagcct
tgtcttgagtcctagacatgactgtccaatgcctcccctcccccatatct
acctcttccctcctgcacaattttctgttaccaaggaccacccccctctc
taaagccaatttcccttacctctgccatcctggatccattcctgcagtat
cccctctccaagtcccagccctccggctcacatctcacttgtttgtaaaa
cctcgttggaatgtctctacgatcgattccatgttagcatctttcaccca
tagacactgactttgaagcatgtgctgcttacagttggtcaagtggacac
aaactggagtcatttgacagaaaggaacttcacttgaggaaacacctcca
tcatactggctattaatatacctgtgtggcttattattattaatagttgg
tgtgagagggcccagctcactgtgggtcaggccacccctgggcaggcagc
cctgggagccatggggcaggtagctgagtgtaagcctgcaagcaagtcag
taaatagcactcctccatggtttctacttcagttctctcttatgctcttt
ctttgacttccttctatgatggactatggctgggatgcattatacaaata
aaccctgccttcctcaagttgcttttggtgctggtgttaagcagcaacag
gaagcaaagcaggacagagcacaaacattacattttatattcgcttagat
tttcatcgctctcgtatagtttatgtccataaatacttgctgagtgaatg
gataagtcaagaaaaatgaaacatagacatcagaggacagcactgtcaat
ctaaagtcatatctctggcaagatcaagcatattatctgatgggctagga
cttcacgtagaatgctaaacgtctcatcataaaatgacagtggtggagat
gtggcaattctaagccaattcccgtaactgcaaagttcagagagaaattg
gttctacggggataatgcaattaaaatgtccgcgctgactctgaactgaa
gctcatc
tttggtcacacaggattcaacaattgaccaagatcaaagctaagtcagct
gtgtggcgggcccagcaccgtatatttcacgtaaatggtgtggcttgtgg
cacactcagtcggagttggtcccattttacatccctcctgcagagagtgg
gacccagcacaggagctgttctgtgactgaccccgttttcctcaggagct
ggtacaggtctgtccgaacatgaagtcattctaacattcctgtcagtcgt
atctgaaatttcacgaaggatggggtcattctaggccctaggaggtctgg
ggttgtaggggggcagtggtggggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22944678_22945862
seq2: B6Ng01-014N18.b_48_1204 (reverse)

seq1  GATGAGCTTCATAGGTCAG-GTAAGC-AGAACTATTTTAAAATGGCATTT  48
      ||||||||||  || |||| || |||  | || |||||  ||| ||| ||
seq2  GATGAGCTTC--AGTTCAGAGTCAGCGCGGAC-ATTTT--AATTGCA-TT  44

seq1  ATCCCCGATGAAACCAAAT--TCTCTGGACTGTGCAGCTACAGGAAATGG  96
      ||||||| |  |||||| |  |||||| ||| ||||| ||| |||| |||
seq2  ATCCCCG-TAGAACCAATTTCTCTCTGAACTTTGCAGTTACGGGAATTGG  93

seq1  CTAAAGAAATGCCAACCATCTC--ACACTGTCATTTTTATGAATGAGACT  144
      ||  |||| |||||  ||||||   |||||||| ||||||| ||||||| 
seq2  CT-TAGAATTGCCA--CATCTCCACCACTGTCA-TTTTATG-ATGAGAC-  137

seq1  GTTTTAGGCATTCCTAACGTGGAAAGTCCTAGCCCATTCAGGATAAATTA  194
      ||||   ||||||   |||||  ||||||||||||| ||| |||||  ||
seq2  GTTT--AGCATTC--TACGTG--AAGTCCTAGCCCA-TCA-GATAA--TA  177

seq1  TGGCCTTTGATCTTTGCCAGAGAATATGACTTTTAGATTGGACAGTGCTG  244
      ||    |||||| ||||||||| ||||||| |||||||| ||||||||||
seq2  TG---CTTGATC-TTGCCAGAG-ATATGAC-TTTAGATT-GACAGTGCTG  220

seq1  TCCTCTGATGTTCTATGTTTTCATTTTTCTTGACTTATCCATTCACTCAG  294
      |||||||||| |||||| ||||||||||||||||||||||||||||||||
seq2  TCCTCTGATG-TCTATG-TTTCATTTTTCTTGACTTATCCATTCACTCAG  268

seq1  CAAGTATTTTATTGGACATAAACTATACGAGAGCGATGAAAATCTAAGCG  344
      |||||||||   ||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATTT--ATGGACATAAACTATACGAGAGCGATGAAAATCTAAGCG  316

seq1  AATATAAAATGTAATGTTTGTGCTCTGTCCTGCTTTGCTTCCTGTTGCTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAATGTAATGTTTGTGCTCTGTCCTGCTTTGCTTCCTGTTGCTG  366

seq1  CTTAACACCAGCACCAAAAGCAACTTGAGGAAGGCAGGGTTTATTTGTAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACACCAGCACCAAAAGCAACTTGAGGAAGGCAGGGTTTATTTGTAT  416

seq1  AATGCATCCCAGCCATAGTCCATCATAGAAGGAAGTCAAAGAAAGAGCAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATCCCAGCCATAGTCCATCATAGAAGGAAGTCAAAGAAAGAGCAT  466

seq1  AAGAGAGAACTGAAGTAGAAACCATGGAGGAGTGCTATTTACTGACTTGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAACTGAAGTAGAAACCATGGAGGAGTGCTATTTACTGACTTGC  516

seq1  TTGCAGGCTTACACTCAGCTACCTGCCCCATGGCTCCCAGGGCTGCCTGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGCTTACACTCAGCTACCTGCCCCATGGCTCCCAGGGCTGCCTGC  566

seq1  CCAGGGGTGGCCTGACCCACAGTGAGCTGGGCCCTCTCACACCAACTATT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGTGGCCTGACCCACAGTGAGCTGGGCCCTCTCACACCAACTATT  616

seq1  AATAATAATAAGCCACACAGGTATATTAATAGCCAGTATGATGGAGGTGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATAAGCCACACAGGTATATTAATAGCCAGTATGATGGAGGTGT  666

seq1  TTCCTCAAGTGAAGTTCCTTTCTGTCAAATGACTCCAGTTTGTGTCCACT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAAGTGAAGTTCCTTTCTGTCAAATGACTCCAGTTTGTGTCCACT  716

seq1  TGACCAACTGTAAGCAGCACATGCTTCAAAGTCAGTGTCTATGGGTGAAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAACTGTAAGCAGCACATGCTTCAAAGTCAGTGTCTATGGGTGAAA  766

seq1  GATGCTAACATGGAATCGATCGTAGAGACATTCCAACGAGGTTTTACAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAACATGGAATCGATCGTAGAGACATTCCAACGAGGTTTTACAAA  816

seq1  CAAGTGAGATGTGAGCCGGAGGGCTGGGACTTGGAGAGGGGATACTGCAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGATGTGAGCCGGAGGGCTGGGACTTGGAGAGGGGATACTGCAG  866

seq1  GAATGGATCCAGGATGGCAGAGGTAAGGGAAATTGGCTTTAGAGAGGGGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGATCCAGGATGGCAGAGGTAAGGGAAATTGGCTTTAGAGAGGGGG  916

seq1  GTGGTCCTTGGTAACAGAAAATTGTGCAGGAGGGAAGAGGTAGATATGGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCCTTGGTAACAGAAAATTGTGCAGGAGGGAAGAGGTAGATATGGG  966

seq1  GGAGGGGAGGCATTGGACAGTCATGTCTAGGACTCAAGACAAGGCTGATG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGAGGCATTGGACAGTCATGTCTAGGACTCAAGACAAGGCTGATG  1016

seq1  TGGCAGTCATCTATGTATGTAGTAGCCACTGTGAAAAACCCAATGAGATA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTCATCTATGTATGTAGTAGCCACTGTGAAAAACCCAATGAGATA  1066

seq1  AACTTCCAAGGACAGGTTTATGCTGAGCGTGTTGGTGCACATCTTCAATA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCAAGGACAGGTTTATGCTGAGCGTGTTGGTGCACATCTTCAATA  1116

seq1  CTAGCTCTTACACGGTGGTTTGAGGCCAGCCTGGTGAATTC  1185
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCTTACACGGTGGTTTGAGGCCAGCCTGGTGAATTC  1157

seq1: chr9_22808184_22808510
seq2: B6Ng01-014N18.g_74_400

seq1  TTTGGTCACACAGGATTCAACAATTGACCAAGATCAAAGCTAAGTCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCACACAGGATTCAACAATTGACCAAGATCAAAGCTAAGTCAGCT  50

seq1  GTGTGGCGGGCCCAGCACCGTATATTTCACGTAAATGGTGTGGCTTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCGGGCCCAGCACCGTATATTTCACGTAAATGGTGTGGCTTGTGG  100

seq1  CACACTCAGTCGGAGTTGGTCCCATTTTACATCCCTCCTGCAGAGAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCAGTCGGAGTTGGTCCCATTTTACATCCCTCCTGCAGAGAGTGG  150

seq1  GACCCAGCACAGGAGCTGTTCTGTGACTGACCCCGTTTTCCTCAGGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGCACAGGAGCTGTTCTGTGACTGACCCCGTTTTCCTCAGGAGCT  200

seq1  GGTACAGGTCTGTCCGAACATGAAGTCATTCTAACATTCCTGTCAGTCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGGTCTGTCCGAACATGAAGTCATTCTAACATTCCTGTCAGTCGT  250

seq1  ATCTGAAATTTCACGAAGGATGGGGTCATTCTAGGCCCTAGGAGGTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAATTTCACGAAGGATGGGGTCATTCTAGGCCCTAGGAGGTCTGG  300

seq1  GGTTGTAGGGGGGCAGTGGTGGGGAAT  327
      |||||||||||||||||||||||||||
seq2  GGTTGTAGGGGGGCAGTGGTGGGGAAT  327