BAC Information

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BAC

Clone NameB6Ng01-015B15
Chromosome9 (Build37)
Map Location 38,306,408 - 38,466,976
singlet/doubletdoublet
Overlap geneOlfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916
Upstream geneBC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906
Downstream geneOlfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015B15.bB6Ng01-015B15.g
ACCDH849452DH849453
length1,125902
definitionDH849452|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B15, 5' end.DH849453|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,465,852 - 38,466,976)(38,306,408 - 38,307,307)
sequence
gaattcagggagcttatttccttttctgtacaaaatgagactaaactgaa
atgttcttaagaagagagcctacagtaggatcaaagcatattaagaggtg
ttgcttccaactcaaattacagtttctctgatgaagttcttttgcatggt
gtactggctagttttgtgtcaacttgacacacctggagttatcacagaga
aaggagcttcagttgaggaaatgcctccatgagatccaactgtaaggcat
tttctcaattagtgatcaagggggaaaggccccttgtgggtgggaccatc
tctgggctggtattcttgggttctataagagagcaggctgagcaagccag
gtgaagcaagccagtaaagaacatccctccaggacctctgcatcagctcc
tgctccctgacctgtttgagttccagtcttgacttcctttgatgatgaac
agcagcatgaaattgtaagccgaataaaccctttcctccccaacttgctt
cttggtcatgatgtttgtgcaggaatagaaaccctgactaagacacatgg
tcagatctcaaaccttgcagattcataattctgttatatggtgccagaag
acattctttccatgatccactctttttcttttagttttagattaaggata
tggttttcaatcatactacagcaaacatgaatctgtactagcaaacaaca
atatacattcaaggtatctacttcctattttcattgttttgggagggctg
tactgaaggaagacaggaggtagtataagactaaatctttttagtgcaga
cttctttattttgtcatgctttataaataatactaaaatttgaacaccct
ttgaatgcttgccagctgattctgtacacctagttatggctagagaacac
tagcaacatacatttcacaggggagaggatccagcatggagtgtggatta
tcctctacatagctcttatttctgtgtctacagattctcctcagagagga
tggactcagttaatatttcctttggtgactgaatcatttctggtggatta
acttgacaggccttatctaccaataccttgttctttatatttctgggcaa
tgtacctagcccactgcattgggga
gaattctcaccttcacactcctatgtattttttcctccttaacttgtcct
gcatagaccttttttattgttcagtcattacacctaaaatgctgatgaac
tttgtactaaagaaaaatgttatttcttatgagggatgcatggcccagtt
ctatttctttgccttttttgcaatttctgaatgttatgtgctgacaacaa
tggcctatgatcgctatgtggccatttgcaatccactcttgtacaacatt
gtaatgtctcctaagttgtgttcttatcttatgatgggtacatatttgat
ggggttttctggtgccatgatccatactggatgtatcctaagactgacat
tctgtgataaaaacaccatcaatcactatttctgtgacatcctccctttg
ctccagatctcctgcaccagtacctatgttaatgagatagagttgttcat
tgtagcaggaaaggatattattgttcccactgtaatcatctttacctctt
acggctttatcctctccagcatcctcaaaataagctccacagcaggaatg
tccaaagccttcagcacatgtagctctcacataatcgctctttgtctgtt
ctttggatcatgtacatttatgtatctaaaaccctcctcagttgagtcta
tggaccaggggaaaatatcttctgtcttttataacattgttgtccccctg
atgaatccattaatctatagccttaggaacaaagatgttaaaattgctat
aaaaaaaactataaccaaaggaaagttttaatcagaatttgttatccttt
ttacctttagttataactcaagtttttattgtatatggattaatattttt
tttacattcttcattgtagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38465852_38466976
seq2: B6Ng01-015B15.b_47_1171 (reverse)

seq1  TCCCCAATGCAGT-GACTAGGTACATTG-CCAGAAATATAAAGAACAAGG  48
      ||||||||||||| | |||||||||||| ||||||||||||||||||| |
seq2  TCCCCAATGCAGTGGGCTAGGTACATTGCCCAGAAATATAAAGAACAA-G  49

seq1  GTATTTGTAGATAAGGCTTGTC-AGTTAATCCCACCAGAATGAATTCAGT  97
      ||||| ||||||||||| |||| ||||||| |||||||||   |||||||
seq2  GTATTGGTAGATAAGGCCTGTCAAGTTAAT-CCACCAGAAATGATTCAGT  98

seq1  CACCAAA-GAAATATTTACTGAGTCCATTCTTCTCTGA-GAGAATCTGTA  145
      ||||||| |||||||| |||||||||| || ||||||| |||||||||||
seq2  CACCAAAGGAAATATTAACTGAGTCCA-TCCTCTCTGAGGAGAATCTGTA  147

seq1  GACACAGAAAATAGAGCTATGTTAGAGGATAATCCACACTCCATGCTGGA  195
      ||||||||||  ||||||||| ||||||||||||||||||||||||||||
seq2  GACACAGAAATAAGAGCTATG-TAGAGGATAATCCACACTCCATGCTGGA  196

seq1  TCCTTCTCCCCTGTGAAATGTATGTTGCTAGTGTTCTTCTAGCCATAACT  245
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCC-TCTCCCCTGTGAAATGTATGTTGCTAGTGTTC-TCTAGCCATAACT  244

seq1  AGGTGTACAGAATCAGCTGGCAAGCATTCAAA-GGTGTTCAAATTTTAGT  294
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGTGTACAGAATCAGCTGGCAAGCATTCAAAGGGTGTTCAAATTTTAGT  294

seq1  ATTATTTATAAAGCATGACAAAATAAAGAAGTCTGCACTAAAAAGATTTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATAAAGCATGACAAAATAAAGAAGTCTGCACTAAAAAGATTTA  344

seq1  GTCTTATACTACCTCCTGTCTTCCTTCAGTACAGCCCTCCCAAAACAATG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATACTACCTCCTGTCTTCCTTCAGTACAGCCCTCCCAAAACAATG  394

seq1  AAAATAGGAAGTAGATACCTTGAATGTATATTGTTGTTTGCTAGTACAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGAAGTAGATACCTTGAATGTATATTGTTGTTTGCTAGTACAGA  444

seq1  TTCATGTTTGCTGTAGTATGATTGAAAACCATATCCTTAATCTAAAACTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTTGCTGTAGTATGATTGAAAACCATATCCTTAATCTAAAACTA  494

seq1  AAAGAAAAAGAGTGGATCATGGAAAGAATGTCTTCTGGCACCATATAACA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAGAGTGGATCATGGAAAGAATGTCTTCTGGCACCATATAACA  544

seq1  GAATTATGAATCTGCAAGGTTTGAGATCTGACCATGTGTCTTAGTCAGGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATGAATCTGCAAGGTTTGAGATCTGACCATGTGTCTTAGTCAGGG  594

seq1  TTTCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAA  644

seq1  GGGTTTATTCGGCTTACAATTTCATGCTGCTGTTCATCATCAAAGGAAGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTATTCGGCTTACAATTTCATGCTGCTGTTCATCATCAAAGGAAGT  694

seq1  CAAGACTGGAACTCAAACAGGTCAGGGAGCAGGAGCTGATGCAGAGGTCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTGGAACTCAAACAGGTCAGGGAGCAGGAGCTGATGCAGAGGTCC  744

seq1  TGGAGGGATGTTCTTTACTGGCTTGCTTCACCTGGCTTGCTCAGCCTGCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGATGTTCTTTACTGGCTTGCTTCACCTGGCTTGCTCAGCCTGCT  794

seq1  CTCTTATAGAACCCAAGAATACCAGCCCAGAGATGGTCCCACCCACAAGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATAGAACCCAAGAATACCAGCCCAGAGATGGTCCCACCCACAAGG  844

seq1  GGCCTTTCCCCCTTGATCACTAATTGAGAAAATGCCTTACAGTTGGATCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTCCCCCTTGATCACTAATTGAGAAAATGCCTTACAGTTGGATCT  894

seq1  CATGGAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGG  944

seq1  TGTGTCAAGTTGACACAAAACTAGCCAGTACACCATGCAAAAGAACTTCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAAGTTGACACAAAACTAGCCAGTACACCATGCAAAAGAACTTCA  994

seq1  TCAGAGAAACTGTAATTTGAGTTGGAAGCAACACCTCTTAATATGCTTTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAACTGTAATTTGAGTTGGAAGCAACACCTCTTAATATGCTTTG  1044

seq1  ATCCTACTGTAGGCTCTCTTCTTAAGAACATTTCAGTTTAGTCTCATTTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTACTGTAGGCTCTCTTCTTAAGAACATTTCAGTTTAGTCTCATTTT  1094

seq1  GTACAGAAAAGGAAATAAGCTCCCTGAATTC  1125
      |||||||||||||||||||||||||||||||
seq2  GTACAGAAAAGGAAATAAGCTCCCTGAATTC  1125

seq1: chr9_38306408_38307307
seq2: B6Ng01-015B15.g_67_968

seq1  GAATTCTCACCTTCACACTCCTATGTATTTTTTCCTCCTTAACTTGTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTTCACACTCCTATGTATTTTTTCCTCCTTAACTTGTCCT  50

seq1  GCATAGACCTTTTTTATTGTTCAGTCATTACACCTAAAATGCTGATGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGACCTTTTTTATTGTTCAGTCATTACACCTAAAATGCTGATGAAC  100

seq1  TTTGTACTAAAGAAAAATGTTATTTCTTATGAGGGATGCATGGCCCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACTAAAGAAAAATGTTATTTCTTATGAGGGATGCATGGCCCAGTT  150

seq1  CTATTTCTTTGCCTTTTTTGCAATTTCTGAATGTTATGTGCTGACAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTTTGCCTTTTTTGCAATTTCTGAATGTTATGTGCTGACAACAA  200

seq1  TGGCCTATGATCGCTATGTGGCCATTTGCAATCCACTCTTGTACAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTATGATCGCTATGTGGCCATTTGCAATCCACTCTTGTACAACATT  250

seq1  GTAATGTCTCCTAAGTTGTGTTCTTATCTTATGATGGGTACATATTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTCTCCTAAGTTGTGTTCTTATCTTATGATGGGTACATATTTGAT  300

seq1  GGGGTTTTCTGGTGCCATGATCCATACTGGATGTATCCTAAGACTGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTTTCTGGTGCCATGATCCATACTGGATGTATCCTAAGACTGACAT  350

seq1  TCTGTGATAAAAACACCATCAATCACTATTTCTGTGACATCCTCCCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGATAAAAACACCATCAATCACTATTTCTGTGACATCCTCCCTTTG  400

seq1  CTCCAGATCTCCTGCACCAGTACCTATGTTAATGAGATAGAGTTGTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGATCTCCTGCACCAGTACCTATGTTAATGAGATAGAGTTGTTCAT  450

seq1  TGTAGCAGGAAAGGATATTATTGTTCCCACTGTAATCATCTTTACCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAGGAAAGGATATTATTGTTCCCACTGTAATCATCTTTACCTCTT  500

seq1  ACGGCTTTATCCTCTCCAGCATCCTCAAAATAAGCTCCACAGCAGGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTTTATCCTCTCCAGCATCCTCAAAATAAGCTCCACAGCAGGAATG  550

seq1  TCCAAAGCCTTCAGCACATGTAGCTCTCACATAATCGCTCTTTGTCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGCCTTCAGCACATGTAGCTCTCACATAATCGCTCTTTGTCTGTT  600

seq1  CTTTGGATCATGTACATTTATGTATCTAAAACCCTCCTCAGTTGAGTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATCATGTACATTTATGTATCTAAAACCCTCCTCAGTTGAGTCTA  650

seq1  TGGACCAGGGGAAAATATCTTCTGTCTTTTATAACATTGTTGTCCCCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAGGGGAAAATATCTTCTGTCTTTTATAACATTGTTGTCCCCCTG  700

seq1  ATGAATCCATTAATCTATAGCCTTAGGAACAAAGATGTTAAAATTGCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCCATTAATCTATAGCCTTAGGAACAAAGATGTTAAAATTGCTAT  750

seq1  AAAAAAAACTATAACCAAAGGAAAGTTTTAATCAGAATTTGTTATCCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACTATAACCAAAGGAAAGTTTTAATCAGAATTTGTTATCCTTT  800

seq1  TTACCTTTAGTTATAACTCAAG-TTTTATTGTATATGGATTAATA-TTTT  848
      |||||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  TTACCTTTAGTTATAACTCAAGTTTTTATTGTATATGGATTAATATTTTT  850

seq1  TTTACATTCTTCATTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTCTTCATTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  900

seq1  AT  900
       |
seq2  GT  902