BAC Information

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BAC

Clone NameB6Ng01-017C08
Chromosome9 (Build37)
Map Location 38,967,363 - 38,968,495
singlet/doubletsinglet
Overlap geneOlfr942-ps1
Upstream geneOlfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27
Downstream geneOlfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1, Olfr978, Olfr979, Olfr980, Olfr981, 1700001J11Rik, Olfr982, Olfr983, Olfr984, Olfr985, 1700030E15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017C08.bB6Ng01-017C08.g
ACCDH850910DH850911
length1,134743
definitionDH850910|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C08, 5' end.DH850911|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtacttcatcatcttcaaagatcaagggaaagtatccttcat
gttacactattgctgcgcccatagttatcaccttgatctacaacccaagg
aataagtatatctgtattgccttgaagaaaatactagaaagaaaataatt
aatatcaattgaagtaatatagatttacttattaaaatataatcatcaac
tgatatatttttcaattgcaattattcattttaatcaatttattgatcta
aacatgtcttctgaaacttgaatatatctaatttctgtgtgtccattact
gtttcttatttaaaagtggtaaatgtggatttttaggtagaactattccc
agttttctaggaaacagccagattgatttccagagtggttgtaccagttt
gcaatcccaccagttatggaggagtgttcctttttctccacatccctgcc
agcaagtcctgtcactggatattttgaccttagccattctgactgcacta
cattttcattttcaaatctatgacctcttttttccaataactgttcttac
ctgcatatatgtatatcagtttttatatttttataatactctaacagagc
tttattgacattcttaccctcacgattatagaccagtaacatgatagctg
tatttctgcagaaactccccaaatactagtctatccatatgtgttgcttg
cctaacaagctgaagggtaggcaatcttaatttatctttgtgtgcttata
cttttaattctgctttgatttcagtacttattaatatactaaaaattatt
tgaaactatttctaacaatccgaaactaatttatttttaccttttttatt
atttttgtgtcattttaattaaagcattcctctttttccctttcttctcc
aaacacttctacctactctttcatactgtccttcatattgaggagcttta
ttcatgaattgtgtgaattgtttatacatttgtattcttaataatcacag
caataaatatatgaagtaattcagttattggataaaattattttttagaa
ggaagtaggagataagaacttaaaacttttaacacctttaataacaatat
tggagagttctctggagttcttgactggtggggt
gaattccagggtcatatgttatattatttatttatgaacttacttactta
tttgcttatttactctcttagttacttgtttaactcaccacagcatattc
aaaagtagctgcaattgtttgcaatactgtcaataatgaatgaaatttag
tctcctttcctcaacattctctcaacatattttgtattctgattttattc
tgaataaaatagggcaacttgaaatctaaaatttgcatttttgttttatg
cttattttgtttgattgtttattaatttgttgtttttgctacaatggaat
tgttgggtatttgatttaataaacttccaaattgcacgggaatttgtatg
tctgtttacaagatgctgcatgtctctgtccccaattgatttagattggt
aaacaaagtttcaagcagtcaatggctggacagggagacagtggctggac
atatagaatgcccatataagaaacccaggagcatagtaagaagagagtcc
accatgagaggagtgtaggatagatcatgcagtgaaggagcaggagggag
aaatgtaaatgtaagggggaaagcagctctggaggagctgcccagaacgg
gctagggcagcaatgataaaatatagatttagaagaatttactgaggaat
atggggagtgtgttagccacatggagggttcaggagtgaccgtccttcaa
gcaaattaaggcatattaaattataaagggtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38967363_38968495
seq2: B6Ng01-017C08.b_49_1182

seq1  GAATTCATGTACTTCATCATCTTCAAAGATCAAGGGAAAGTATCCTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTACTTCATCATCTTCAAAGATCAAGGGAAAGTATCCTTCAT  50

seq1  GTTACACTATTGCTGCGCCCATAGTTATCACCTTGATCTACAACCCAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACTATTGCTGCGCCCATAGTTATCACCTTGATCTACAACCCAAGG  100

seq1  AATAAGTATATCTGTATTGCCTTGAAGAAAATACTAGAAAGAAAATAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTATATCTGTATTGCCTTGAAGAAAATACTAGAAAGAAAATAATT  150

seq1  AATATCAATTGAAGTAATATAGATTTACTTATTAAAATATAATCATCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAATTGAAGTAATATAGATTTACTTATTAAAATATAATCATCAAC  200

seq1  TGATATATTTTTCAATTGCAATTATTCATTTTAATCAATTTATTGATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATTTTTCAATTGCAATTATTCATTTTAATCAATTTATTGATCTA  250

seq1  AACATGTCTTCTGAAACTTGAATATATCTAATTTCTGTGTGTCCATTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTCTTCTGAAACTTGAATATATCTAATTTCTGTGTGTCCATTACT  300

seq1  GTTTCTTATTTAAAAGTGGTAAATGTGGATTTTTAGGTAGAACTATTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTATTTAAAAGTGGTAAATGTGGATTTTTAGGTAGAACTATTCCC  350

seq1  AGTTTTCTAGGAAACAGCCAGATTGATTTCCAGAGTGGTTGTACCAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTAGGAAACAGCCAGATTGATTTCCAGAGTGGTTGTACCAGTTT  400

seq1  GCAATCCCACCAGTTATGGAGGAGTGTTCCTTTTTCTCCACATCCCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCCACCAGTTATGGAGGAGTGTTCCTTTTTCTCCACATCCCTGCC  450

seq1  AGCAAGTCCTGTCACTGGATATTTTGACCTTAGCCATTCTGACTGCACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCCTGTCACTGGATATTTTGACCTTAGCCATTCTGACTGCACTA  500

seq1  CATTTTCATTTTCAAATCTATGACCTCTTTTTTCCAATAACTGTTCTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCATTTTCAAATCTATGACCTCTTTTTTCCAATAACTGTTCTTAC  550

seq1  CTGCATATATGTATATCAGTTTTTATATTTTTATAATACTCTAACAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATATATGTATATCAGTTTTTATATTTTTATAATACTCTAACAGAGC  600

seq1  TTTATTGACATTCTTACCCTCACGATTATAGACCAGTAACATGATAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGACATTCTTACCCTCACGATTATAGACCAGTAACATGATAGCTG  650

seq1  TATTTCTGCAGAAACTCCCCAAATACTAGTCTATCCATATGTGTTGCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGCAGAAACTCCCCAAATACTAGTCTATCCATATGTGTTGCTTG  700

seq1  CCTAACAAGCTGAAGGGTAGGCAATCTTAATTTATCTTTGTGTGCTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAAGCTGAAGGGTAGGCAATCTTAATTTATCTTTGTGTGCTTATA  750

seq1  CTTTTAATTCTGCTTTGATTTCAGTACTTATTAATATACTAAAAATTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATTCTGCTTTGATTTCAGTACTTATTAATATACTAAAAATTATT  800

seq1  TGAAACTATTTCTAACAATCCGAAACTAATTTATTTTTACCTTTTTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTATTTCTAACAATCCGAAACTAATTTATTTTTACCTTTTTTATT  850

seq1  ATTTTTGTGTCATTTTAATTAAAGCATTCCTCTTTTTCCCTTTCTTCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTGTCATTTTAATTAAAGCATTCCTCTTTTTCCCTTTCTTCTCC  900

seq1  AAACACTTCTACCTACTCTTTCATACTGTCCTTCATATTGAGGAGCTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTCTACCTACTCTTTCATACTGTCCTTCATATTGAGGAGCTTTA  950

seq1  TTCATGAATTGTGTGAATTTGTTTATACATTTGTATTCTTAAATATCACA  1000
      ||||||||||||||||| ||||||||||||||||||||||||  ||||||
seq2  TTCATGAATTGTGTGAA-TTGTTTATACATTTGTATTCTTAATAATCACA  999

seq1  GCAATAAATATATGAAGTAATTCAGTTATT-GATAAAATTATCTTTTAAG  1049
      |||||||||||||||||||||||||||||| ||||||||||| |||| ||
seq2  GCAATAAATATATGAAGTAATTCAGTTATTGGATAAAATTAT-TTTTTAG  1048

seq1  AAGGAAGTAGGAGATAAGAACTTAAAACTTTT-ACA-CATTAATAACAAT  1097
      |||||||||||||||||||||||||||||||| ||| | |||||||||||
seq2  AAGGAAGTAGGAGATAAGAACTTAAAACTTTTAACACCTTTAATAACAAT  1098

seq1  ATT-GAGATGTTCTCTGAGTTTCTATGACT-GTGGGGT  1133
      ||| |||| ||||||||   |||| ||||| |||||||
seq2  ATTGGAGA-GTTCTCTGGAGTTCT-TGACTGGTGGGGT  1134