BAC Information

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BAC

Clone NameB6Ng01-017E18
Chromosome9 (Build37)
Map Location 30,668,905 - 30,821,966
singlet/doubletdoublet
Overlap geneAdamts15, Adamts8
Upstream geneHnt, Snx19, LOC666478
Downstream geneZbtb44, BC038156, St14, Aplp2, EG638580, EG666539, Prdm10, Nfrkb, Tmem45b, LOC666558, EG666576, Barx2, LOC100042266, Tpi-rs4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017E18.bB6Ng01-017E18.g
ACCDH851022DH851023
length916243
definitionDH851022|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E18, 5' end.DH851023|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,821,049 - 30,821,966)(30,668,905 - 30,669,147)
sequence
gaattctgcatggatcacatctttgtgcatgttttttgagtaagacatat
ctgtccaaggatgtttatatactgaacagccttgggaagtaaaaatactg
tctctctccagagagacaggcttagtgttctttataacagatagattctc
taaacccatggtcttcttggcataactcagtacctctgcatgtgaaaatg
tttaatgggtctctgtatgtcattctgtgagaactgagcttggtgaagta
gagtaaatgtgtgatgctcaaagatcattatatccaagcacaaaaatgtc
attgaaacctgttgttttcttcaatcaatgaacaccgatagttttgtttt
gttttttgagtgcttattctctggttactgagattattatgagataagct
gtccttcatcttagacccaggagttgtcatgccttctctcagaacccatg
agacactaacacgttacttagttacatttcaaattagtaaaatctctgat
ccttcacagttttgttaggtagcttggcatttcttgtttttgtgtccatg
tgataaccacctctaaaaatagtccttccaccaaatccatctcagtgaat
tctgcttccagctgggtcttgactgagacatctggacattttgaaatctt
aagagactgttgtatttgtctttcgttgtgtcaacttagctaggctgtga
tgctctggtgtttggtcaaacaccagtctaggtactgctgtggagataga
tgtgattgacattttatttacttattcaatatttattttgtctgtatgct
ttgtgtgccaatatgagtgtacacataccgtggtgtatgtgtggaggcca
gaggaccttgggtgttggtctcactttcctctatgcttgagtcaattttc
ttttttcctgcaaatt
tggggacaaagaagtgaaaagattttgtactgagtggaaatatattaaag
cagtggtccaaggggagtttacagagctaaatgtcgtgctttttttttaa
tgacttttcaggattgtggcacacatttacaatttcaaaacttaaaggct
gagaaaggaagattaaaaatttaagatgaggcctgccctacataattagg
cagagagagaaagagagaggggggagagagagagagagtttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_30821049_30821966
seq2: B6Ng01-017E18.b_45_959 (reverse)

seq1  ATTTGCAGAAAAAAAAAAAAATTGACTCAAGCATAGAGGAAAGTGAAGAC  50
      ||||||||  |||||| |||||||||||||||||||||||||||| ||||
seq2  ATTTGCAG-GAAAAAAGAAAATTGACTCAAGCATAGAGGAAAGTG-AGAC  48

seq1  CAACACCCAAGGTCCTCTGGCCTCCACACATACACCACGGTATGTGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCCAAGGTCCTCTGGCCTCCACACATACACCACGGTATGTGTACA  98

seq1  CTCATATTGGCACACAAAGCATACAGACAAAATAAATATTGAATAAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATTGGCACACAAAGCATACAGACAAAATAAATATTGAATAAGTAA  148

seq1  ATAAAATGTCAATCACATCTATCTCCACAGCAGTACCTAGACTGGTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGTCAATCACATCTATCTCCACAGCAGTACCTAGACTGGTGTTT  198

seq1  GACCAAACACCAGAGCATCACAGCCTAGCTAAGTTGACACAACGAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAACACCAGAGCATCACAGCCTAGCTAAGTTGACACAACGAAAGAC  248

seq1  AAATACAACATGTCTCTTAAGATTTCAAAATGTCCAGATGTCTCAGTCAA  300
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAATACAACA-GTCTCTTAAGATTTCAAAATGTCCAGATGTCTCAGTCAA  297

seq1  GACCCAGCTGGAAGCAGAATTCACTGAGATGGATTTGGTGGAAGGACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGCTGGAAGCAGAATTCACTGAGATGGATTTGGTGGAAGGACTAT  347

seq1  TTTTAGAGGTGGTTATCACATGGACACAAAAACAAGAAATGCCAAGCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAGGTGGTTATCACATGGACACAAAAACAAGAAATGCCAAGCTAC  397

seq1  CTAACAAAACTGTGAAGGATCAGAGATTTTACTAATTTGAAATGTAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAAACTGTGAAGGATCAGAGATTTTACTAATTTGAAATGTAACTA  447

seq1  AGTAACGTGTTAGTGTCTCATGGGTTCTGAGAGAAGGCATGACAACTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACGTGTTAGTGTCTCATGGGTTCTGAGAGAAGGCATGACAACTCCT  497

seq1  GGGTCTAAGATGAAGGACAGCTTATCTCATAATAATCTCAGTAACCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTAAGATGAAGGACAGCTTATCTCATAATAATCTCAGTAACCAGAG  547

seq1  AATAAGCACTCAAAAAACAAAACAAAACTATCGGTGTTCATTGATTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCACTCAAAAAACAAAACAAAACTATCGGTGTTCATTGATTGAAG  597

seq1  AAAACAACAGGTTTCAATGACATTTTTGTGCTTGGATATAATGATCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACAGGTTTCAATGACATTTTTGTGCTTGGATATAATGATCTTTG  647

seq1  AGCATCACACATTTACTCTACTTCACCAAGCTCAGTTCTCACAGAATGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCACACATTTACTCTACTTCACCAAGCTCAGTTCTCACAGAATGAC  697

seq1  ATACAGAGACCCATTAAACATTTTCACATGCAGAGGTACTGAGTTATGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGACCCATTAAACATTTTCACATGCAGAGGTACTGAGTTATGCC  747

seq1  AAGAAGACCATGGGTTTAGAGAATCTATCTGTTATAAAGAACACTAAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACCATGGGTTTAGAGAATCTATCTGTTATAAAGAACACTAAGCC  797

seq1  TGTCTCTCTGGAGAGAGACAGTATTTTTACTTCCCAAGGCTGTTCAGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCTGGAGAGAGACAGTATTTTTACTTCCCAAGGCTGTTCAGTAT  847

seq1  ATAAACATCCTTGGACAGATATGTCTTACTCAAAAAACATGCACAAAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATCCTTGGACAGATATGTCTTACTCAAAAAACATGCACAAAGAT  897

seq1  GTGATCCATGCAGAATTC  918
      ||||||||||||||||||
seq2  GTGATCCATGCAGAATTC  915

seq1: chr9_30668905_30669147
seq2: B6Ng01-017E18.g_73_315

seq1  TGGGGACAAAGAAGTGAAAAGATTTTGTACTGAGTGGAAATATATTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACAAAGAAGTGAAAAGATTTTGTACTGAGTGGAAATATATTAAAG  50

seq1  CAGTGGTCCAAGGGGAGTTTACAGAGCTAAATGTCGTGCTTTTTTTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTCCAAGGGGAGTTTACAGAGCTAAATGTCGTGCTTTTTTTTTAA  100

seq1  TGACTTTTCAGGATTGTGGCACACATTTACAATTTCAAAACTTAAAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTCAGGATTGTGGCACACATTTACAATTTCAAAACTTAAAGGCT  150

seq1  GAGAAAGGAAGATTAAAAATTTAAGATGAGGCCTGCCCTACATAATTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGAAGATTAAAAATTTAAGATGAGGCCTGCCCTACATAATTAGG  200

seq1  CAGAGAGAGAAAGAGAGAGGGGGGAGAGAGAGAGAGAGTTTGA  243
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAGAAAGAGAGAGGGGGGAGAGAGAGAGAGAGTTTGA  243