BAC Information

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BAC

Clone NameB6Ng01-019O13
Chromosome9 (Build37)
Map Location 12,355,066 - 12,355,668
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039989, LOC622505
Downstream geneLOC100039680, LOC665285, LOC100039729
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019O13.bB6Ng01-019O13.g
ACCDH852858DH852859
length9921,251
definitionDH852858|Mus musculus domesticus DNA, BAC clone: B6Ng01-019O13, 5' end.DH852859|Mus musculus domesticus DNA, BAC clone: B6Ng01-019O13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcttctatcattttgttgaaagtattttctgggccttggagc
tgggagttttcaccttcttctctttctagtatttgtatgttaggtccttt
catggtatcccagatttcttggatgatttgagtcagggatttcttagatt
taacattttctttgactgatatttcaatttcttttattgtatcttctata
ctggatgtgttctcatccatcacttgcataatgttggtgatatttatgtt
gctctttttctctttcctatggtttacatctccaggatgccctcaatttt
tgtttttgtttttctttttttccttctctattttcacatattgaccagtt
ttatttatttcctttacccatttgattgtatttttctgcagttctttgag
taattttttttctctttaaaggcttctagctgtttgattgtattttcctg
aatttctttaagggatttattaatttttccttttaaatgcttatagtttg
gttttaaggtcattgtgcttcagttatgttaggatacacagggcttgctg
tagtagaacagttgttctgaaggtgccatattgccagggctctgttgatt
gtatgctttcatgtgcttttacccatctggttgtctctgtatgttcctgt
tgtagcaggtattgggacaggtcctaaccttgatgatcctggtgtgatgt
gcttctgttggatgtcctttgaaatacaagtttctcaacagttgggtgac
cccctggggatatggcttgaaagggattgtaaggtagagacaggtagaga
gttggcaagacaatggaggtctaggtttcagcagacactcatggcagcta
ggagtaccccagaggattcagcagacagtggaatgagtagagagtctctg
tatagaattttttttctttaaagaagctttgtttattttttagatttgca
taaaggaaacaaaacacaagaagcaggacaaatcccccagtc
gaattcctagacagataacaggtaccaaagttaaatcaggatcagattaa
taatctaaacagccttatatcccctaaagaaatagaagcaatcattaata
gtctcccaaccaaaaaaagcccaggaccagattggtttagtgcagagttc
tatcagacattcaaagaagatctaattccaattcttcacaaactattcca
caaaatagaagcagaaggtactctacccaattcattctatgaagccacaa
ttactctgatacctaaaccacagaagacccaacaaagatagataacttca
caccaatttcacttttgaatatcaatgcaaaaatactcaatataattctt
gctaactgaatccaagaacacatcacaacaatcatccatcctgacttagt
aggttttattcaatggatgcagggatggtttaagatacagaaatccatca
atgtaatccacgatataaacaaactcaaagacaaaaccacatgatcatct
cgttatttgcagagaaagcaattgacaaaatccaacacccattcatgata
aaagtcttggaaagatcaggaatttgaggcgcatacctaaacatgataaa
agcaatttacagcaaaccaatagccaacataaaagtaaatagtgagaagc
tggaagcaataccactaaaatcagggactagacaaggctgcccactttct
ccatacctatccaacctagtatttaaagtcctagccagagcaattccata
acaaaaggagatcaaggggatacaaattggaaacgaagaagtcaaaaaat
atcactttttgcatgtgatatgatagtatatataagtgagcctaaaattc
taccagagaactcctaaacctgataaacaccttctgtgaagtagctggat
ataaaattaactcaacaagtcaatgacctttctctacacaaaggacaaac
aggctgaagaaagaaattagggaaataacaccctttacaaatatcataaa
taatgtaaaatacctttgcatgactctagggagtgaatgatcttgcatga
ataagaaattcaagtttctaagaaagaattgaaagaagatctagagatgg
aagatccctgcttcatggattgccagatcattagtaaaatggttttcttg
caaagcaatctcagaatcataaattcccatcaattcaatcatctcacatt
gaaggcaattgccatcatgatacaaatcctgggaaaggaaactctctcca
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_12355066_12355668
seq2: B6Ng01-019O13.b_443_1037

seq1  GAGTAATTTTTTTTCTCTTTAAAGGCTTCTAGCTGTTTGATTGTATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATTTTTTTTCTCTTTAAAGGCTTCTAGCTGTTTGATTGTATTTTC  50

seq1  CTGAATTTCTTTAAGGGATTTATTAATTTTTCCTTTTAAATGCTTATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTTCTTTAAGGGATTTATTAATTTTTCCTTTTAAATGCTTATAGT  100

seq1  TTGGTTTTAAGGTCATTGTGCTTCAGTTATGTTAGGATACACAGGGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTAAGGTCATTGTGCTTCAGTTATGTTAGGATACACAGGGCTTG  150

seq1  CTGTAGTAGAACAGTTGTTCTGAAGGTGCCATATTGCCAGGGCTCTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTAGAACAGTTGTTCTGAAGGTGCCATATTGCCAGGGCTCTGTTG  200

seq1  ATTGTATGCTTTCATGTGCTTTTACCCATCTGGTTGTCTCTGTATGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGCTTTCATGTGCTTTTACCCATCTGGTTGTCTCTGTATGTTCC  250

seq1  TGTTGTAGCAGGTATTGGGACAGGTCCTAACCTTGATGATCCTGGTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAGCAGGTATTGGGACAGGTCCTAACCTTGATGATCCTGGTGTGA  300

seq1  TGTGCTTCTGTTGGATGTCCTTTGAAATACAAGTTTCTCAACAGTTGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTCTGTTGGATGTCCTTTGAAATACAAGTTTCTCAACAGTTGGGT  350

seq1  GACCCCCTGGGGATATGGCTTGAAAGGGATTGTAAGGTAGAGACAGGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCCTGGGGATATGGCTTGAAAGGGATTGTAAGGTAGAGACAGGTAG  400

seq1  AGAGTTGGCAAGACAATGGAGGTCTAGGTTTCAGCAGACACTCATGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGGCAAGACAATGGAGGTCTAGGTTTCAGCAGACACTCATGGCAG  450

seq1  CTAGGAGTACCCCAGAGGATTCAGCAGACAGTGGAAATGAGTAGAGAGTC  500
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTAGGAGTACCCCAGAGGATTCAGCAGACAGTGG-AATGAGTAGAGAGTC  499

seq1  TCTGTATAGAATTTTTTTTTCTTTAAAGAAGCTTTTGTTTATTTTTTTAG  550
      ||||||||||| |||||||||||||||||||| |||||||| ||||||||
seq2  TCTGTATAGAA-TTTTTTTTCTTTAAAGAAGC-TTTGTTTA-TTTTTTAG  546

seq1  TATATGCATTACAGGAAACAAAACACAAGAAAGCAAGAACAAATCACCCA  600
       || |||| || ||||||||||||||||| |||| || ||||||| ||||
seq2  -ATTTGCA-TAAAGGAAACAAAACACAAG-AAGC-AGGACAAATCCCCCA  592

seq1  GTC  603
      |||
seq2  GTC  595