BAC Information

Click to search

BAC

Clone NameB6Ng01-024K06
Chromosome9 (Build37)
Map Location 47,429,541 - 47,430,355
singlet/doubletsinglet
Overlap geneCadm1
Upstream geneEG667890, 2900052N01Rik, D930036J05
Downstream geneLOC100043303, D930028F11Rik, 4432416J03Rik, EG640268, EG434401, LOC667933, Rexo2, Rbm7, EG434402, Nnmt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024K06.bB6Ng01-024K06.g
ACCDH856214DH856215
length8171,162
definitionDH856214|Mus musculus domesticus DNA, BAC clone: B6Ng01-024K06, 5' end.DH856215|Mus musculus domesticus DNA, BAC clone: B6Ng01-024K06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattttggaaaaatcctggggacagaactcattgctgtaagaag
tcattgatgcttatggtatcacagaccttcacaagcaagtgggaatacct
gaaggcacatttctgcaaacagggccagaatttgataaaacccaaagtca
attaaaatacaacaagggctcctacccagtaactaaaggaagaaactgag
gcccctttatttatctgattttttttattaagtatttttataaggtttaa
ggaaaaccataaaactttcaacaacaggccacaaggtttgagcatagcct
gaaaatactctagtttaatccaatcagggtttttgtttgtttgttttgtt
ttgtttttgaggggggcgggattctgaggctaaaggaagttgaaatgagg
aagcctgtaaacaagtttatgaagcagactagcaatttaaaaaacacata
ctgaacctgcttttataagcgagcttgaatctttttaattgttattacac
tgaggttgctttcttacagtgatttacaatcacatttccataggaggaag
aacaacacagccttctagcaggttctgttctgaactacagaatgtaggaa
gagaaaaatttgagcaacaagcccgcgcttcttcctgtgactcacagggg
gttaactaccgcactgcagttgcaaacgccacccgagggtcgatccaata
atgtctctattttaaacaacatcactttaccaccaacagattctgagttt
cactcaaaaccacagtagcctgcaaccatcagagccccttgcccattaag
agagtaattaccagcca
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agaggtgctggagaggatgtggagaaagaggaacactcctccattgttgg
tgggattacaagcttgtacaaccactctggaaatcagtctggcggttcct
cagaaaattggacatagtactaccggaggatcccgcaatacctctcctgg
gcatatatccagatgatgttctaaccggtaaggaggatacatgctccact
atgttcatagcagccttatttataatagccagaagctggaaagaacccag
atgcccctcaacagaggaatgggtacaaaaaatgtggtacatttacacaa
tggagtactactcagctattaaaaggaatgaatttatgaaattcctaggc
aaatggttggacctggagggcatcatcctgagtgaggtaacacaatcaca
aaagaactcaaatgatatgtactcactgataagtggatattagcccagaa
acttagtatacccgagatataagatacaatttgcatgaaactgaagaaga
acgaagaccaaagtgtggacactttgccccttcttagaattggaaacaat
cacccatggaaggagttacagagacaaagtttggagctgagacaaaagga
tggaccatgtagagactgccatatccagggatccatcccataattagcct
ccaaacgatgacactactgcatacactagcaagcgtttgctgaaaggacc
ctgatatagctatcacttgtgagaaaaggccggggcctagcaaacacata
agtggatgctcacagtcagtatgggatggatcacaggcccccaatgaaga
gctagagaaagtatccaagagctaaagaacctgcacccttgtagtgcaac
aacattatgaactaccagtaccctgagctctgactctagctgcatatgta
tcaaagatggctagtcgcatcactggaaagagcggcccattgacatgcac
ttttatgccccagtacaggtagcgagggccaataagtgggatgggtgggt
gagaggagtacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_47429541_47430355
seq2: B6Ng01-024K06.b_34_850 (reverse)

seq1  TGGCTGGTTATTAACTCTCTTAATGGGCAA-GGGCTCTGATGGTTGCAGG  49
      |||||||| ||| ||||||||||||||||| |||||||||||||||||||
seq2  TGGCTGGTAATT-ACTCTCTTAATGGGCAAGGGGCTCTGATGGTTGCAGG  49

seq1  CTAACTGTGGTTTTGAGTG-AACTCAGAATCTGTTGGTGGT-AAGTGATG  97
      || |||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  CT-ACTGTGGTTTTGAGTGAAACTCAGAATCTGTTGGTGGTAAAGTGATG  98

seq1  TTGTTT-AAATAGAGACCTTATTGGATCGACCCTCGGGTGGCGTTTGCAA  146
      |||||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  TTGTTTAAAATAGAGACATTATTGGATCGACCCTCGGGTGGCGTTTGCAA  148

seq1  CTGCAGTGCGGTAGTTAACCCCCTGTGAGTCACAGGAAGAAGCGCGGGCT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTGCGGTAGTTAACCCCCTGTGAGTCACAGGAAGAAGCGCGGGCT  198

seq1  TGTTGCTCAAATTTTTCTCTTCCTACATTCTGTAGTTCAGAACAGAACCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCAAATTTTTCTCTTCCTACATTCTGTAGTTCAGAACAGAACCT  248

seq1  GCTAGAAGGCTGTGTTGTTCTTCCTCCTATGGAAATGTGATTGTAAATCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAGGCTGTGTTGTTCTTCCTCCTATGGAAATGTGATTGTAAATCA  298

seq1  CTGTAAGAAAGCAACCTCAGTGTAATAACAATTAAAAAGATTCAAGCTCG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGAAAGCAACCTCAGTGTAATAACAATTAAAAAGATTCAAGCTCG  348

seq1  CTTATAAAAGCAGGTTCAGTATGTGTTTTTTAAATTGCTAGTCTGCTTCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAAAGCAGGTTCAGTATGTGTTTTTTAAATTGCTAGTCTGCTTCA  398

seq1  TAAACTTGTTTACAGGCTTCCTCATTTCAACTTCCTTTAGCCTCAGAATC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTGTTTACAGGCTTCCTCATTTCAACTTCCTTTAGCCTCAGAATC  448

seq1  CCGCCCCCCTCAAAAACAAAACAAAACAAACAAACAAAAACCCTGATTGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCCCCCTCAAAAACAAAACAAAACAAACAAACAAAAACCCTGATTGG  498

seq1  ATTAAACTAGAGTATTTTCAGGCTATGCTCAAACCTTGTGGCCTGTTGTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTAGAGTATTTTCAGGCTATGCTCAAACCTTGTGGCCTGTTGTT  548

seq1  GAAAGTTTTATGGTTTTCCTTAAACCTTATAAAAATACTTAATAAAAAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTTATGGTTTTCCTTAAACCTTATAAAAATACTTAATAAAAAAA  598

seq1  ATCAGATAAATAAAGGGGCCTCAGTTTCTTCCTTTAGTTACTGGGTAGGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATAAATAAAGGGGCCTCAGTTTCTTCCTTTAGTTACTGGGTAGGA  648

seq1  GCCCTTGTTGTATTTTAATTGACTTTGGGTTTTATCAAATTCTGGCCCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGTTGTATTTTAATTGACTTTGGGTTTTATCAAATTCTGGCCCTG  698

seq1  TTTGCAGAAATGTGCCTTCAGGTATTCCCACTTGCTTGTGAAGGTCTGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGAAATGTGCCTTCAGGTATTCCCACTTGCTTGTGAAGGTCTGTG  748

seq1  ATACCATAAGCATCAATGACTTCTTACAGCAATGAGTTCTGTCCCCAGGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATAAGCATCAATGACTTCTTACAGCAATGAGTTCTGTCCCCAGGA  798

seq1  TTTTTCCAAAATAGAATTC  815
      |||||||||||||||||||
seq2  TTTTTCCAAAATAGAATTC  817