BAC Information

Click to search

BAC

Clone NameB6Ng01-026D16
Chromosome18 (Build37)9 (Build37)
Map Location 51,833,004 - 51,833,13626,800,623 - 26,801,103
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042373, LOC100042385, Prr16
Downstream geneEG240289, Ftmt, Srfbp1, Lox, Zfp474, 1700034E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026D16.bB6Ng01-026D16.g
ACCDH857335DH857336
length949475
definitionDH857335|Mus musculus domesticus DNA, BAC clone: B6Ng01-026D16, 5' end.DH857336|Mus musculus domesticus DNA, BAC clone: B6Ng01-026D16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(51,833,004 - 51,833,136)(26,800,623 - 26,801,103)
sequence
gaattctttgattagctctgtaccccatttttaatagggttatttgattt
tctggagtacagcttcttgagttctttgtatatattagatattaaccctc
tataggatgtaggattgatgaagatcttttcccaatctgttggcggcctt
tttgtcttattgacagtatcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcgattcttgatcttacatcacaagctattggtgttc
tgttcaggaacttttcccctgtgcccatatgttcaaggcttttccccact
ttctcttctataagattcagtgtatctggttttatgtgaaggtccttgat
tcacttggacttaagctttgtactaggagatgagaatggataaatttacc
ttcttctacatgttaactgccagttgagccagcaccatttgttgaaaatg
ctgtcttttttccactgtatggttttagctcctttgtcaaagatcaagtg
accagaggtgtgtgggttcattattacacagtttttatcacaattgttct
gtagtacagcttgaggtaagggatggtgattccctcagaagttcttttat
tgttaagaatagtttttgctatcatgggttttttgttattccagctgaat
tttgaaattgccctttctaaatctatgaaggttgtgttgaaattttgatg
gggattgcattgaataagtagatagcttttggcaggatggccatgtttac
tgtattaatcctgataatccatgagcttgagagatctttccatcttctga
gatcttcttcaatttctttcttcggaaacttgaagttcttatcatacaga
tctctcaattgcttagttagaatcacaccaaggtattttatattatttgt
ggctattgtgtaggatgttgtttccctattttctttctcagcctgttta
aacttaactgtgtttcaacatacgaaaggttttgtttttgttttaaatca
gtgttatccacatgttgtatgcccatattattccattgcagccttggtag
gaaattaagccaacgtatacagattatgatttcttaatcgatgttataaa
gtgaacatgttggtggaaacagtggctgctgccaaatatgcagagaggat
gggaatttttccaaggaatgtttgcagaaaaactaggacagcgcatccga
aaacacggcacacgagagcaactgcagcccatccgaaaacacggcacacg
agagcaactgctttttttttttttactttctttttttttttttttttttt
ttggttttgttttgtgatgctgaacttgaacaggtacctcaactaagcaa
cactttgctttgggttgtatcaccgcccttcgtttaaaggaaaaaaaaag
cgggggggggggatttatgaagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_51833004_51833136
seq2: B6Ng01-026D16.b_426_557 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCA  50
      |||||||||| ||||||||||||||||||||| |||||||||||||| ||
seq2  CCACACACCTCTGGTCACTTGATCTTTGACAAAGGAGCTAAAACCATACA  50

seq1  GTGGAAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGCGG  100
      |||| |||||||||||||||||||||||||||||||||| |||||||| |
seq2  GTGG-AAAAAAGACAGCATTTTCAACAAATGGTGCTGGCTCAACTGGCAG  99

seq1  TTATCATGTAGAAGAATGCGAATTGATCCATTC  133
      ||| |||||||||||| |  |||| ||||||||
seq2  TTAACATGTAGAAGAAGGTAAATTTATCCATTC  132

seq1: chr9_26800623_26801103
seq2: B6Ng01-026D16.g_67_547 (reverse)

seq1  CCTCCTCATAAATCCCCCCCCCCCGCTTTTTTTTTCCTTTAAACGAAGGG  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCATAAATCCCCCCCCCCCGCTTTTTTTTTCCTTTAAACGAAGGG  50

seq1  CGGTGATACAACCCAAAGCAAAGTGTTGCTTAGTTGAGGTACCTGTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGATACAACCCAAAGCAAAGTGTTGCTTAGTTGAGGTACCTGTTCAA  100

seq1  GTTCAGCATCACAAAACAAAACCAAAAAAAAAAAAAAAAAAAAAAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCATCACAAAACAAAACCAAAAAAAAAAAAAAAAAAAAAAGAAAG  150

seq1  TAAAAAAAAAAAAAGCAGTTGCTCTCGTGTGCCGTGTTTTCGGATGGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAAAAGCAGTTGCTCTCGTGTGCCGTGTTTTCGGATGGGCT  200

seq1  GCAGTTGCTCTCGTGTGCCGTGTTTTCGGATGCGCTGTCCTAGTTTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGCTCTCGTGTGCCGTGTTTTCGGATGCGCTGTCCTAGTTTTTCT  250

seq1  GCAAACATTCCTTGGAAAAATTCCCATCCTCTCTGCATATTTGGCAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATTCCTTGGAAAAATTCCCATCCTCTCTGCATATTTGGCAGCAG  300

seq1  CCACTGTTTCCACCAACATGTTCACTTTATAACATCGATTAAGAAATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTTTCCACCAACATGTTCACTTTATAACATCGATTAAGAAATCAT  350

seq1  AATCTGTATACGTTGGCTTAATTTCCTACCAAGGCTGCAATGGAATAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTATACGTTGGCTTAATTTCCTACCAAGGCTGCAATGGAATAATA  400

seq1  TGGGCATACAACATGTGGATAACACTGATTTAAAACAAAAACAAAACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATACAACATGTGGATAACACTGATTTAAAACAAAAACAAAACCTT  450

seq1  TCGTATGTTGAAACACAGTTAAGTTGAATTC  481
      |||||||||||||||||||||||||||||||
seq2  TCGTATGTTGAAACACAGTTAAGTTGAATTC  481