BAC Information

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BAC

Clone NameB6Ng01-026J14
Chromosome9 (Build37)
Map Location 80,447,923 - 80,448,815
singlet/doubletsinglet
Overlap genenone
Upstream geneCol12a1, Cox7a2, Tmem30a, Filip1, LOC100041218, LOC666490, Senp6, LOC100041249, Myo6, Impg1
Downstream geneEG666534, LOC100039038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026J14.bB6Ng01-026J14.g
ACCDH857598DH857599
length1,204892
definitionDH857598|Mus musculus domesticus DNA, BAC clone: B6Ng01-026J14, 5' end.DH857599|Mus musculus domesticus DNA, BAC clone: B6Ng01-026J14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggagaaacccacatatatcttcttatgaaaaatacacatttat
gaaggaataaaaagacttgaataaatctgatcctgagaaagagacaatag
gtcatacaattttcacaaagtatcttgtgtactgtattaagctcaaagta
gatgtcaacaattatgaagcatgaaattctaagtgctaaagctgacaagt
tagtctggttcagtttcattgatggaatcagaagacaatgagatgcctgg
gtcacagacaagaactttccactcctggacacgaggcgacatggtttcca
aactggcattgaatccccacagtttctaagtcctggaaagggttggaagt
atgggagaaaaacaggtaaatattgctcaaaacaaggtaaatattgctca
caaagtgggtttccatcaccactgagaaacttgaaatgaggcaattctga
gctgaaaaatctttttaaagcaaatcatggcttcagatgagagcattact
ttattgccccaggcaaaagcatatctcacttctgtcccactgggaaatat
tacttctgtcatcccaagatactgtctatgcaaatatctttgaaaatttt
gtgaaacaaaaggcatagtactcaaagtccatgctgaaacacgggagacc
caggaggaactacctagcaaacagcacacacaacgtgcaaaacataaatg
tttttaacactttacattaaacaaatgtaagactaaatgtagaataagaa
atatacgcacaacagccaccttaaaaacagcatttaaggcccattcaata
gtagcaaattcttgcctggcactgtaaacttagtcagctactcatggcag
tgaggccatagaacccagagaggaaccaactagtgtcattcagctagaca
aatctaactctgatgacatcctaaatataaagccttatttatactcacag
attagtgtagctctcgtctgtcaccaagaagcttctctatgcagctgact
gaagactttacagaaaggctcactgtttcaaatgcaaagaacacttatga
tggggtgcccacctaatttggtacattacatgcaactttttatactaagt
ctgaggaaattgtgaaaatgaagcttcagattgtagaactgtaacaacac
tggctgtctgatcaccttctaaaaaagtgctaactaaaagctttgggggg
tgat
gaattctctcaaataagataaccaaatatatatcttatccactgtcatta
ttattgtaatagtcatagaaaatagagttggaataataaaaaaaatgatg
tttctcatggaaatttaagcagaatggttattgatcaaagctttctgaat
atgagctatctgctatgaggctgcatttcaatatatgaagaagcaaatgt
gaccaagccagctcagtcagtcagcagggtctcgagggagggaatgagga
tcaaagaaagaaaagacaatttgacaacattatagtatcactccagcaag
tgctgaaacaagtttattttttccctgtctgcttttatatcattctaggc
acatgtaaagaatatagtcagctctaaggcataaagaaagtagtcaagga
acaaacaaggcataaacaaaggtcctgtggtcactgtattcagggactta
tcaagatgatcaagatacaaggaacacatttctcagctgtatttatcttg
agcctagcccagtggcaaattcttacctgagccaacttcctagtcctagc
tcaatgtaaatattcttgctgatatccttgaagcagcaccaagaactctc
tacacaaatggaggtaagaattgttgggataagtcaacaggctttgtggg
aaccagtgaccatgagaaaagagttcactcagagtctgttctactcttct
tagaaagtgatcctataatattttatgaggaaattctaaaaatcaacaaa
ttttactttttttctctccactcaagttcaagactagtttacagaaacat
ttgtattttcactacacaaaactttattgatcttttttattattaatgaa
agtgggtgatggagggctcatgtctttaaactttatcaatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_80447923_80448815
seq2: B6Ng01-026J14.g_66_957

seq1  GAATTCTCTCAAATAAGATAACCAAATATATATCTTATCCACTGTCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAAATAAGATAACCAAATATATATCTTATCCACTGTCATTA  50

seq1  TTATTGTAATAGTCATAGAAAATAGAGTTGGAATAATAAAAAAAATGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTAATAGTCATAGAAAATAGAGTTGGAATAATAAAAAAAATGATG  100

seq1  TTTCTCATGGAAATTTAAGCAGAATGGTTATTGATCAAAGCTTTCTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATGGAAATTTAAGCAGAATGGTTATTGATCAAAGCTTTCTGAAT  150

seq1  ATGAGCTATCTGCTATGAGGCTGCATTTCAATATATGAAGAAGCAAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTATCTGCTATGAGGCTGCATTTCAATATATGAAGAAGCAAATGT  200

seq1  GACCAAGCCAGCTCAGTCAGTCAGCAGGGTCTCGAGGGAGGGAATGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGCCAGCTCAGTCAGTCAGCAGGGTCTCGAGGGAGGGAATGAGGA  250

seq1  TCAAAGAAAGAAAAGACAATTTGACAACATTATAGTATCACTCCAGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAAGAAAAGACAATTTGACAACATTATAGTATCACTCCAGCAAG  300

seq1  TGCTGAAACAAGTTTATTTTTTCCCTGTCTGCTTTTATATCATTCTAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAACAAGTTTATTTTTTCCCTGTCTGCTTTTATATCATTCTAGGC  350

seq1  ACATGTAAAGAATATAGTCAGCTCTAAGGCATAAAGAAAGTAGTCAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAAAGAATATAGTCAGCTCTAAGGCATAAAGAAAGTAGTCAAGGA  400

seq1  ACAAACAAGGCATAAACAAAGGTCCTGTGGTCACTGTATTCAGGGACTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAGGCATAAACAAAGGTCCTGTGGTCACTGTATTCAGGGACTTA  450

seq1  TCAAGATGATCAAGATACAAGGAACACATTTCTCAGCTGTATTTATCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATGATCAAGATACAAGGAACACATTTCTCAGCTGTATTTATCTTG  500

seq1  AGCCTAGCCCAGTGGCAAATTCTTACCTGAGCCAACTTCCTAGTCCTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGCCCAGTGGCAAATTCTTACCTGAGCCAACTTCCTAGTCCTAGC  550

seq1  TCAATGTAAATATTCTTGCTGATATCCTTGAAGCAGCACCAAGAACTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTAAATATTCTTGCTGATATCCTTGAAGCAGCACCAAGAACTCTC  600

seq1  CACACAAATGGAGGTAAGAATTGTTGGGATAAGTCAACAGGCTTTGTGGG  650
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAATGGAGGTAAGAATTGTTGGGATAAGTCAACAGGCTTTGTGGG  650

seq1  AACCAGTGACCATGAG-AAAGAGTTCACTCAGAGTCTGTTCTACTCTTCT  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AACCAGTGACCATGAGAAAAGAGTTCACTCAGAGTCTGTTCTACTCTTCT  700

seq1  TAGAAAGTGATCCTATAATATTTTATGAGGAAATTCTAAAAATCAACAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTGATCCTATAATATTTTATGAGGAAATTCTAAAAATCAACAAA  750

seq1  -TTTAC-TTTTTTCTCTCCACTCAAGTTCAAAGACTAGTTTAACAGAAAC  797
       ||||| |||||||||||||||||||||| ||||||||||| ||||||||
seq2  TTTTACTTTTTTTCTCTCCACTCAAGTTC-AAGACTAGTTT-ACAGAAAC  798

seq1  ATTTGTATTTTCACTACACAAAACTTTAGTGATCTTTTTTTATTATTAAT  847
      |||||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  ATTTGTATTTTCACTACACAAAACTTTATTGATC-TTTTTTATTATTAAT  847

seq1  GAAAGTGGGTGAATGGAGGGCTCATGTCATTTAAAC-TTATCAATCA  893
      ||||||||||| |||||||||||||||| ||||||| ||||||||||
seq2  GAAAGTGGGTG-ATGGAGGGCTCATGTC-TTTAAACTTTATCAATCA  892