BAC Information

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BAC

Clone NameB6Ng01-029H23
Chromosome9 (Build37)
Map Location 38,711,277 - 38,907,096
singlet/doubletdoublet
Overlap geneGA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740
Upstream geneEG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1
Downstream geneOlfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1, Olfr978, Olfr979, Olfr980, Olfr981, 1700001J11Rik, Olfr982, Olfr983
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029H23.bB6Ng01-029H23.g
ACCDH859683DH859684
length1,0901,021
definitionDH859683|Mus musculus domesticus DNA, BAC clone: B6Ng01-029H23, 5' end.DH859684|Mus musculus domesticus DNA, BAC clone: B6Ng01-029H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,906,016 - 38,907,096)(38,711,277 - 38,712,302)
sequence
gaattcacacacctatggtcacttgatctttgaaaaaggaggtaaaacca
tccagtgaaaaaaaaatacagcattttcaacaaatggttctggttcaact
ggaggtcagcttgtagaagaatgaaaatcaaaccattcttatctccttgt
aggaagctcaagtccaagttgatcaaggacttccatgtaaaatcagatac
actgaaactaatagcaaagaaattggggaaggcctcaagcatatgggcat
agggaaaaatttcctgaatagaacacaaatagtttatgctctaagatcaa
gaattgacaaatgggacctagtgaaatttcaaagcttctgtaaggaaaag
gacactgtcaataggacaaaatggcaacgaagagattgggaaaaggtctt
tacctatcctattttcaatagagggcttatatccaaaatatacaaagaac
tcaagaagttagactgcagagaatcaaataaacctattaaaaatgtggta
cagagatagacaagtaaatttagataccatctttattaccaataattact
agcaaattaaaagacaaggctaggttacacagtgtcaaagcctatttttt
tttttttataactcagaaagaattgagggaaaagagatacttaaacctta
aaaagggtttgatgttgaatagaaattcttattaaattctcttacaatct
gagcccccttgctctgttttgtaactgaatttaacagagataggtggcta
attatttttctagaaccattgacattctagggtctctatgcatgcatgtg
tactgcttctctatgcatcctgcccattacctcagtagaatatctagagc
aatacttctatgtttgcccattttaagtcaggcttcagtgttttataggc
attttggggcttttccatagtatgttgaatattgttattcattagtataa
gccattgtggcaatttttacatatgaatattagtgtaaaaggcattaaat
tatttttaatgataaatatcttaggtataatgtagctaatggtaaatagc
cacacatggattgcataaatttaaaatcacaataaatcta
gaattctcaaatataccaagggatcccaaaatagacttgaataaggcaaa
acttaatacttgaatgactcaacatgatttttacaattagtgtataaagt
tgacaaaacagtaacacaattcctatagtatttttactgttctagaaatt
catttttaactttttagacatataatataaaaatttattcatggtaagtt
gaagtacatgaaactgcacatatttaagaagcacaaaaataacttaggac
acaattataagttttgtaactattgccatcaaaatgacaaatagttgatg
atattttatgactctttttttttttaatttttgcccatagacaattgctg
atattcacactttcatagtggactggaaattgtcagttctatcatttcat
ttaaataagcattttattaatatatgtttctcttttctttatcaaaccta
atcagttatatgtttatctataaatccatttttattgtttagaatacaat
ttatgtatggactttacagtgtattcacttaggtaatggtgatcattagg
gtcttttagtctattacaaatgaagatgctatctattccgtagtgttatg
gtgatatatatatatatatatatatacatatatatatataatttaaacaa
atatctagtttaaatacttgtatattatgttaagtgatctcttagtcatt
catctaactttcaacctacttccaaatatggtaaattttaaacttttaac
acttatggataaaagatacagttggtttgcatttaaaggcaaaacttcat
ttcatgattttaattttattagttttaatgtatgcctagtctatgctttt
aaatttgcttctccagtgataaatatggaaatgtattttttatgtacttt
gtgctcatattttatcctacaggtttatttctataataacacaaactagc
cataaatcagggaggatttgctcaagagaccccacttatatctgtttgat
ttgctagattaattcaattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38906016_38907096
seq2: B6Ng01-029H23.b_64_1138 (reverse)

seq1  TAGATTTTATTGTGATTTTAAATTTTATTGCAATTCATGTGTTTGCTATT  50
      |||| ||||||||||||||||||||   |||||| |||||| | ||||  
seq2  TAGA-TTTATTGTGATTTTAAATTT--ATGCAATCCATGTG-TGGCTA--  44

seq1  TTTACATTTAGCTACATATTACCT-AGATATTTATCATTAAAAATAATTT  99
      |||||  ||||||||||  ||||| |||||||||||||||||||||||||
seq2  TTTACCATTAGCTACATTATACCTAAGATATTTATCATTAAAAATAATTT  94

seq1  AATGCCTTTTTACACTAATATTCATATGTAAAAATTG-CACAATGCCTTA  148
      |||||| |||||||||||||||||||||||||||||| ||||||| ||||
seq2  AATGCC-TTTTACACTAATATTCATATGTAAAAATTGCCACAATGGCTTA  143

seq1  TACTAATGAATAACAATATTCAACATACTATGGAGAAAGCCTCAAAATGC  198
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  TACTAATGAATAACAATATTCAACATACTATGGA-AAAGCCCCAAAATGC  192

seq1  CTATAAAACACTGAAGCCTGACTTAAAATGGGCAAACATAGAAGTATTGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAACACTGAAGCCTGACTTAAAATGGGCAAACATAGAAGTATTGC  242

seq1  TCTAGATATTCTACTGAGGTAATGGGCAGGATGCATAGAGAAGCAGTACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATATTCTACTGAGGTAATGGGCAGGATGCATAGAGAAGCAGTACA  292

seq1  CATGCATGCATAGAGACCCTAGAATGTCAATGGTTCTAGAAAAATAATTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATGCATAGAGACCCTAGAATGTCAATGGTTCTAGAAAAATAATTA  342

seq1  GCCACCTATCTCTGTTAAATTCAGTTACAAAACAGAGCAAGGGGGCTCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTATCTCTGTTAAATTCAGTTACAAAACAGAGCAAGGGGGCTCAG  392

seq1  ATTGTAAGAGAATTTAATAAGAATTTCTATTCAACATCAAACCCTTTTTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAGAGAATTTAATAAGAATTTCTATTCAACATCAAACCCTTTTTA  442

seq1  AGGTTTAAGTATCTCTTTTCCCTCAATTCTTTCTGAGTTATAAAAAAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTAAGTATCTCTTTTCCCTCAATTCTTTCTGAGTTATAAAAAAAAA  492

seq1  AAAATAGGCTTTGACACTGTGTAACCTAGCCTTGTCTTTTAATTTGCTAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGCTTTGACACTGTGTAACCTAGCCTTGTCTTTTAATTTGCTAG  542

seq1  TAATTATTGGTAATAAAGATGGTATCTAAATTTACTTGTCTATCTCTGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTGGTAATAAAGATGGTATCTAAATTTACTTGTCTATCTCTGTA  592

seq1  CCACATTTTTAATAGGTTTATTTGATTCTCTGCAGTCTAACTTCTTGAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTTTAATAGGTTTATTTGATTCTCTGCAGTCTAACTTCTTGAGT  642

seq1  TCTTTGTATATTTTGGATATAAGCCCTCTATTGAAAATAGGATAGGTAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTATATTTTGGATATAAGCCCTCTATTGAAAATAGGATAGGTAAA  692

seq1  GACCTTTTCCCAATCTCTTCGTTGCCATTTTGTCCTATTGACAGTGTCCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTTCCCAATCTCTTCGTTGCCATTTTGTCCTATTGACAGTGTCCT  742

seq1  TTTCCTTACAGAAGCTTTGAAATTTCACTAGGTCCCATTTGTCAATTCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTACAGAAGCTTTGAAATTTCACTAGGTCCCATTTGTCAATTCTT  792

seq1  GATCTTAGAGCATAAACTATTTGTGTTCTATTCAGGAAATTTTTCCCTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTAGAGCATAAACTATTTGTGTTCTATTCAGGAAATTTTTCCCTAT  842

seq1  GCCCATATGCTTGAGGCCTTCCCCAATTTCTTTGCTATTAGTTTCAGTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATATGCTTGAGGCCTTCCCCAATTTCTTTGCTATTAGTTTCAGTGT  892

seq1  ATCTGATTTTACATGGAAGTCCTTGATCAACTTGGACTTGAGCTTCCTAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATTTTACATGGAAGTCCTTGATCAACTTGGACTTGAGCTTCCTAC  942

seq1  AAGGAGATAAGAATGGTTTGATTTTCATTCTTCTACAAGCTGACCTCCAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGATAAGAATGGTTTGATTTTCATTCTTCTACAAGCTGACCTCCAG  992

seq1  TTGAACCAGAACCATTTGTTGAAAATGCTGTATTTTTTTTTCACTGGATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCAGAACCATTTGTTGAAAATGCTGTATTTTTTTTTCACTGGATG  1042

seq1  GTTTTACCTCCTTTTTCAAAGATCAAGTGACCA  1081
      |||||||||||||||||||||||||||||||||
seq2  GTTTTACCTCCTTTTTCAAAGATCAAGTGACCA  1075

seq1: chr9_38711277_38712302
seq2: B6Ng01-029H23.g_67_1087

seq1  GAATTCTCAAATATACCAAGGGATCCCAAAATAGACTTGAATAAGGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAATATACCAAGGGATCCCAAAATAGACTTGAATAAGGCAAA  50

seq1  ACTTAATACTTGAATGACTCAACATGATTTTTACAATTAGTGTATAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATACTTGAATGACTCAACATGATTTTTACAATTAGTGTATAAAGT  100

seq1  TGACAAAACAGTAACACAATTCCTATAGTATTTTTACTGTTCTAGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAACAGTAACACAATTCCTATAGTATTTTTACTGTTCTAGAAATT  150

seq1  CATTTTTAACTTTTTAGACATATAATATAAAAATTTATTCATGGTAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAACTTTTTAGACATATAATATAAAAATTTATTCATGGTAAGTT  200

seq1  GAAGTACATGAAACTGCACATATTTAAGAAGCACAAAAATAACTTAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACATGAAACTGCACATATTTAAGAAGCACAAAAATAACTTAGGAC  250

seq1  ACAATTATAAGTTTTGTAACTATTGCCATCAAAATGACAAATAGTTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTATAAGTTTTGTAACTATTGCCATCAAAATGACAAATAGTTGATG  300

seq1  ATATTTTATGACTCTTTTTTTTTTTAATTTTTGCCCATAGACAATTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATGACTCTTTTTTTTTTTAATTTTTGCCCATAGACAATTGCTG  350

seq1  ATATTCACACTTTCATAGTGGACTGGAAATTGTCAGTTCTATCATTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACACTTTCATAGTGGACTGGAAATTGTCAGTTCTATCATTTCAT  400

seq1  TTAAATAAGCATTTTATTAATATATGTTTCTCTTTTCTTTATCAAACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAAGCATTTTATTAATATATGTTTCTCTTTTCTTTATCAAACCTA  450

seq1  ATCAGTTATATGTTTATCTATAAATCCATTTTTATTGTTTAGAATACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTATATGTTTATCTATAAATCCATTTTTATTGTTTAGAATACAAT  500

seq1  TTATGTATGGACTTTACAGTGTATTCACTTAGGTAATGGTGATCATTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATGGACTTTACAGTGTATTCACTTAGGTAATGGTGATCATTAGG  550

seq1  GTCTTTTAGTCTATTACAAATGAAGATGCTATCTATTCCGTAGTGTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTAGTCTATTACAAATGAAGATGCTATCTATTCCGTAGTGTTATG  600

seq1  GTGATATATATATATATATATATATACATATATATATATAATTTAAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATATATATATATATATATATACATATATATATATAATTTAAACAA  650

seq1  ATATCTAGTTTAAATACTTGTATATTATGTTAAGTGATCTCTTAGTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAGTTTAAATACTTGTATATTATGTTAAGTGATCTCTTAGTCATT  700

seq1  CATCTAACTTTCAACCTACTTCCAAATATGGTAAATTTTAAACTTTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAACTTTCAACCTACTTCCAAATATGGTAAATTTTAAACTTTTAAC  750

seq1  ACTTATGGATAAAAGATACAGTTGGTTTGCATTTAAAGGCAAAACTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGGATAAAAGATACAGTTGGTTTGCATTTAAAGGCAAAACTTCAT  800

seq1  TTCATGATTTTAATTTTATTAGTTTTAATGTATGCCTAGTCTATGCTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATTTTAATTTTATTAGTTTTAATGTATGCCTAGTCTATGCTTTT  850

seq1  AAATTTGCTTCTCCAGTGATAAAATATGGAAAATGTA-TTTTTATGTACT  899
      |||||||||||||||||||| |||||||| ||||||| ||||||||||||
seq2  AAATTTGCTTCTCCAGTGAT-AAATATGG-AAATGTATTTTTTATGTACT  898

seq1  TTGTGCTCATATTTTATCCTACAGTTTTATTTCTATAAATAACACAAACT  949
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  TTGTGCTCATATTTTATCCTACAGGTTTATTTCTAT-AATAACACAAACT  947

seq1  AGCAATAAAATCAGGAAGGATTTGCTCATAGA-ACCCCACTTATATCTGT  998
      ||| || |||||||| |||||||||||| ||| |||||||||||||||||
seq2  AGCCAT-AAATCAGGGAGGATTTGCTCA-AGAGACCCCACTTATATCTGT  995

seq1  ATGATTTGCTATGAGTAAATTCAATTAA  1026
       |||||||||| || | |||||||||||
seq2  TTGATTTGCTA-GA-TTAATTCAATTAA  1021