MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-030A11
Chromosome	9 (Build37)
Map Location	68,533,070 - 68,533,853
singlet/doublet	singlet
Overlap gene	Rora
Upstream gene	LOC100040253, EG640799, LOC665794, 3300001A09Rik, EG244911, Vps13c, LOC100041451
Downstream gene	9530091C08Rik, Narg2, EG665815, EG244913, Anxa2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040253 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG640799 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:640799 MGI:3646550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC665794 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665794
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 33 ESTs, 10 Proteins pseudo : _no_value

name	3300001A09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75697 MGI:1922947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG244911 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244911 MGI:3645763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 3 Proteins

name	Vps13c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320528 MGI:2444207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041451 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	Rora (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19883 MGI:104661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9530091C08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320440 MGI:2444034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Narg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93697 MGI:2135947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665815 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665815 MGI:3646524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG244913 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244913 MGI:3645765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 473 ESTs, 12 Proteins

name	Anxa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12306 MGI:88246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040253 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260006 GeneID:100040253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040253 transcript_id : XM_001474360.1

name	EG640799 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386181 GeneID:640799 MGI:3646550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : predicted gene, EG640799 transcript_id : XM_979364.1

name	3300001A09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486784 GeneID:75697 MGI:1922947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3300001A09 gene transcript_id : NM_001081314.1

name	EG244911 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386190 GeneID:244911 MGI:3645763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 3 Proteins product : predicted gene, EG244911 transcript_id : XM_146937.5

name	Vps13c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122114536 GeneID:320528 MGI:2444207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 13C (yeast) transcript_id : NM_177184.3

name	LOC100041451 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260059 GeneID:100041451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041451, transcript variant 2 transcript_id : XM_001477617.1

name	LOC100041451 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260057 GeneID:100041451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : hypothetical protein LOC100041451, transcript variant 1 transcript_id : XM_001477605.1

name	Rora (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305438 GeneID:19883 MGI:104661
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAR-related orphan receptor alpha transcript_id : NM_013646.1

name	9530091C08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801720 GeneID:320440 MGI:2444034
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530091C08 gene transcript_id : NM_177159.3

name	Narg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195813 GeneID:93697 MGI:2135947
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NMDA receptor-regulated gene 2 transcript_id : NM_145618.3

name	EG244913 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260009 GeneID:244913 MGI:3645765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 473 ESTs, 12 Proteins product : predicted gene, EG244913 transcript_id : XM_979711.2

name	Anxa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131198 GeneID:12306 MGI:88246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : annexin A2 transcript_id : NM_007585.3

name	LOC100040253 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260007 GeneID:100040253
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474410.1

name	EG640799 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386182 GeneID:640799 MGI:3646550
definition	codon_start : 1 product : similar to Ankrd26 protein protein_id : XP_984458.1

name	3300001A09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486785 GeneID:75697 MGI:1922947
definition	codon_start : 1 product : hypothetical protein LOC75697 protein_id : NP_001074783.1

name	EG244911 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930340 GeneID:244911 MGI:3645763
definition	codon_start : 1 product : hypothetical protein protein_id : XP_146937.4

name	Vps13c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:122114537 GeneID:320528 MGI:2444207
definition	GO_process : GO:0008104 - protein localization [Evidence IEA] codon_start : 1 note : vps13c 5' variant II; vps13c 5' variant III; Vps13c 5' variant VI product : vacuolar protein sorting 13C protein_id : NP_796158.2

name	LOC100041451 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260058 GeneID:100041451
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001477655.1

name	LOC100041451 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260060 GeneID:100041451
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001477667.1

name	Rora (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305439 CCDS:CCDS23314.1 GeneID:19883 MGI:104661
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0046068 - cGMP metabolism [Evidence IMP]; GO:0006809 - nitric oxide biosynthesis [Evidence IMP]; GO:0043030 - regulation of macrophage activation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : RAR-related orphan receptor alpha protein_id : NP_038674.1

name	9530091C08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893143 GeneID:320440 MGI:2444034
definition	codon_start : 1 product : hypothetical protein LOC320440 protein_id : NP_796133.1

name	Narg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34594671 CCDS:CCDS23315.1 GeneID:93697 MGI:2135947
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : NMDA receptor-regulated gene 2 protein_id : NP_663593.2

name	EG244913 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386194 GeneID:244913 MGI:3645765
definition	codon_start : 1 product : hypothetical protein protein_id : XP_984805.1

name	Anxa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6996913 CCDS:CCDS23316.1 GeneID:12306 MGI:88246
definition	GO_component : GO:0030054 - cell junction [Evidence ISS]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005769 - early endosome [Evidence IDA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0042383 - sarcolemma [Evidence IDA]; GO:0001725 - stress fiber [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005544 - calcium-dependent phospholipid binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0004859 - phospholipase inhibitor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030199 - collagen fibril organization [Evidence IMP]; GO:0042730 - fibrinolysis [Evidence IMP] codon_start : 1 note : calpactin I heavy chain; annexin II; lipocortin II; chromobindin 8; 33-kDa calcimedin; 36-kDa calelectrin; 33-kDa lymphocyte Ca<2+>- binding protein; 33kDa lymphocyte Ca<2+>- binding protein product : annexin A2 protein_id : NP_031611.1

name	EG665815 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665815
definition	number : 1 pseudo : _no_value

name	LOC665794 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260008 GeneID:665794
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 33 ESTs, 10 Proteins product : similar to spindlin pseudo : _no_value transcript_id : XR_031755.1

clone name	MSMg01-390N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518P02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-363M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-030A11.b	B6Ng01-030A11.g
ACC	DH860055	DH860056
length	830	784
definition	DH860055\|Mus musculus domesticus DNA, BAC clone: B6Ng01-030A11, 5' end.	DH860056\|Mus musculus domesticus DNA, BAC clone: B6Ng01-030A11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctaaaattccaagagaagagataaaataaaaaaaaatatagtatt ttgtcaattgaataacaagccaaagaatcctaaagtgttgtcatgggaag agttagtaaaaaaaaaaaaaaaaaaaaaaaaaacctccaccattttgtgc caaatttaaagcaagcatgttttaatagtatatgctgtccaagagatgga tttagtcagggccattctccaaaatttcccagctgaaaatgttctcaaga cacttgctgtaggggcttataagagcagccaaccaacgactgccccaagt tgagacccatcccatgtgagatatccaacctcagacactattcttgatat tccgctatgcttgcagacaggaacctagcataactgtctcctgagaggtt tcacacagcagctgatggaaacatatacagagacccatagtcaaacatca gacagagctcagggagccttgtggaagagtgggggatagagttgaatgag cctgaggggtcaaggacaccacaagaaaacctacagactcaactcaccta ggcccataagggctcacagagactgaaccaccaaccaaagagcctgcagg gccagcacctaggccctctacacatttgcatcagatatgcaacttggtct tcatgtgggtcccctaacaattggagcagggtctgtctctgactctgttg cctgccactggatccccttcccctacctggactgcctttaggcttagtcc ttctgggactagatgtcctagggtggaatggttctcaagggaggcgtccc cttagatagtaatggggggaaggatttata	gaattctgtggtggctaagggcaggaccaaagagactgctttttgaacgg tgtgagagtgcagagcttcatagcatctgtaattccgaccagttgcggct acccagggtaggtccttctgggattcctctgctccacccaccccaggcta tcatcagcctttgcttagggtggccaaagcccagcagctctgcaccattc aacctctgctgctttttctgtttgacaagcctgggagagcggagcctgaa atccctcagtcaggtacaggccattgtcagcttgttatcagtttcctgat tccctgtgtaagcagttttgataatccctgtcatacatgattacgtccct cccctgcctgggacatctcactgtaattgctttgataaactccacctcag tccagtagtttgctcggaatacacttttaccttctgtctgtgtgactaag atgcttctgaactgctctgctcctggggaaaatcaggctttgagcacgag gcccttagcaacagaggccaatcacccaggcagcagcactggctgggggg cctggaggaggggcaggagctggggactccagctaagctccaggggtccc aaggcggtttttctttcttcagctgcttgggggactaaaattgtcagttt ctgtgtgtagcattttcaggattcggagaacatttttcttatgcatgttc atctggtttctggagccatttgactcactcttttataacatttaaaaaat taacaatgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality values	Open. Hide. 61 43 32 41 61 61 61 49 61 61 61 47 61 61 59 35 59 61 61 61 61 61 61 61 61 49 32 17 19 13 18 18 13 13 23 23 23 24 44 59 61 61 61 61 61 59 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 52 44 37 59 59 44 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 52 52 52 49 45 45 41 35 36 29 28 32 36 59 59 52 45 36 31 35 37 36 44 52 52 59 59 59 59 59 59 49 52 59 43 37 39 30 36 43 44 45 59 36 44 39 39 36 24 33 39 41 37 35 35 49 52 50 41 49 39 34 33 18 35 18 32 28 39 59 59 59 59 59 52 44 52 59 49 59 61 59 49 52 45 45 45 43 31 32 36 25 13 43 39 43 59 52 59 59 59 52 39 39 44 41 59 49 49 36 37 52 43 41 36 37 32 28 27 22 35 27 23 39 39 52 59 41 49 52 39 39 52 59 61 59 39 49 41 39 41 31 33 27 35 29 45 36 36 59 59 50 44 55 59 59 52 49 49 36 34 31 43 33 52 52 59 59 59 52 49 44 27 39 18 36 36 43 59 44 43 59 52 44 36 37 49 35 26 37 18 36 27 27 37 37 43 52 59 39 45 38 36 27 13 49 29 24 27 33 39 44 36 37 41 37 44 45 43 37 45 43 52 49 30 36 36 36 43 45 43 52 52 43 28 24 19 41 29 25 39 43 59 59 59 59 52 59 23 31 37 45 49 45 37 43 49 36 36 36 43 43 43 33 35 19 39 38 45 49 52 45 45 38 39 39 41 30 33 43 59 36 43 49 52 59 43 59 52 59 59 59 39 31 36 33 36 43 43 31 23 43 21 22 39 43 55 52 55 55 43 52 55 52 55 55 43 49 55 34 28 11 50 32 28 23 50 26 43 50 49 49 38 55 50 31 43 49 50 50 43 49 29 49 26 43 34 12 49 19 25 55 43 50 43 43 55 35 43 28 50 35 52 50 43 53 52 50 50 50 31 50 50 50 50 53 38 61 61 61 39 47 50 50 53 61 43 42 42 50 52 45 50 27 42 45 61 53 50 47 47 42 43 45 45 39 38 47 47 47 38 33 38 38 50 39 32 38 34 42 38 35 52 45 50 43 38 50 45 52 43 57 47 42 53 47 28 53 50 38 50 27 47 47 50 50 53 53 43 53 42 52 52 45 47 41 52 38 53 53 33 52 34 27 39 50 50 34 50 53 57 53 34 46 38 50 53 38 53 46 47 53 52 53 35 43 43 43 41 52 50 53 37 53 38 57 46 52 50 37 36 36 25 30 11 46 19 40 33 50 36 37 52 40 52 53 57 53 33 40 35 40 37 34 39 53 37 52 57 53 39 37 57 53 53 36 40 40 31 29 48 37 41 37 39 53 27 37 40 24 39 18 21 34 36 43 36 39 30 31 30 31 31 20 39 33 30 30 27 38 30 25 30 29 34 21 46 29 31 29 34 29 39 33 23 51 46 44 29 39 31 51 51 48 28 31 34 29 26 30 21 34 23 29 41 12 30 35 51 39 29 32 16 16 25 27 29 22 25 29 34 34 38 35 29 29 51 26 26 24 33 27 21 38 29 33 33 30 34 20 26 20 51 30 17 32 27 39 36 31 33 31 25 34 28 29 21 20 17 23 42 15 34 20 29 15 22 31 33 30 32 21 23 33 23 14 28 14 30 27 31 31 32 28 38 38 51 31 51 13 24 30 22 21 19 15 38 33 14 21 14	Open. Hide. 61 47 52 49 61 61 14 20 14 18 10 12 18 8 10 12 43 52 39 59 61 59 61 61 61 59 49 61 49 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 33 59 35 30 30 28 36 37 49 61 59 59 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 55 55 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 40 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 47 42 61 61 61 61 53 61 61 47 61 61 61 61 61 61 61 50 61 53 53 52 53 40 53 50 53 53 53 53 53 53 57 50 57 57 53 53 57 42 42 47 53 53 57 57 57 53 53 57 57 50 53 57 53 53 53 53 53 50 53 53 53 57 47 47 53 53 53 57 57 57 53 53 43 53 53 53 38 53 36 46 53 32 57 57 57 50 52 36 53 52 45 53 53 52 52 50 47 41 37 53 45 53 32 53 57 38 37 57 33 53 53 37 43 26 45 57 57 52 43 52 46 45 42 41 37 57 30 52 37 28 57 57 46 46 43 52 46 57 45 42 57 38 30 34 53 53 52 42 53 53 45 50 47 46 47 40 17 37 37 52 46 52 40 57 41 30 50 50 33 37 57 53 40 39 31 29 47 40 53 36 38 30 39 37 39 57 57 52 47 32 24 41 38 28 53 30 10 38 57 26 52 40 27 32 46 43 57 46 34 33 35 53 35 31 37 37 34 40 52 32 38 26 24 48 48 42 53 34 21 57 42 37 30 33 37 40 17 40 40 28 30 57 45 37 41 34 40 34 32 33 41 41 28 57 57 30 32 29 19 44 37 29 40 57 29 18 57 57 57 57 41 24 31 19 47 31 29 46 32 44 30 23 25 30 31 36 30 30 25 44 32 38 30 31 23 21 21 20 8 23 12 44 17 40 8 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_68533070_68533853
seq2: B6Ng01-030A11.g_68_851

seq1  GAATTCTGTGGTGGCTAAGGGCAGGACCAAAGAGACTGCTTTTTGAACGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGTGGCTAAGGGCAGGACCAAAGAGACTGCTTTTTGAACGG  50

seq1  TGTGAGAGTGCAGAGCTTCATAGCATCTGTAATTCCGACCAGTTGCGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAGTGCAGAGCTTCATAGCATCTGTAATTCCGACCAGTTGCGGCT  100

seq1  ACCCAGGGTAGGTCCTTCTGGGATTCCTCTGCTCCACCCACCCCAGGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGGTAGGTCCTTCTGGGATTCCTCTGCTCCACCCACCCCAGGCTA  150

seq1  TCATCAGCCTTTGCTTAGGGTGGCCAAAGCCCAGCAGCTCTGCACCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGCCTTTGCTTAGGGTGGCCAAAGCCCAGCAGCTCTGCACCATTC  200

seq1  AACCTCTGCTGCTTTTTCTGTTTGACAAGCCTGGGAGAGCGGAGCCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGCTGCTTTTTCTGTTTGACAAGCCTGGGAGAGCGGAGCCTGAA  250

seq1  ATCCCTCAGTCAGGTACAGGCCATTGTCAGCTTGTTATCAGTTTCCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCAGTCAGGTACAGGCCATTGTCAGCTTGTTATCAGTTTCCTGAT  300

seq1  TCCCTGTGTAAGCAGTTTTGATAATCCCTGTCATACATGATTACGTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGTAAGCAGTTTTGATAATCCCTGTCATACATGATTACGTCCCT  350

seq1  CCCCTGCCTGGGACATCTCACTGTAATTGCTTTGATAAACTCCACCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCTGGGACATCTCACTGTAATTGCTTTGATAAACTCCACCTCAG  400

seq1  TCCAGTAGTTTGCTCGGAATACACTTTTACCTTCTGTCTGTGTGACTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAGTTTGCTCGGAATACACTTTTACCTTCTGTCTGTGTGACTAAG  450

seq1  ATGCTTCTGAACTGCTCTGCTCCTGGGGAAAATCAGGCTTTGAGCACGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCTGAACTGCTCTGCTCCTGGGGAAAATCAGGCTTTGAGCACGAG  500

seq1  GCCCTTAGCAACAGAGGCCAATCACCCAGGCAGCAGCACTGGCTGGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTAGCAACAGAGGCCAATCACCCAGGCAGCAGCACTGGCTGGGGGG  550

seq1  CCTGGAGGAGGGGCAGGAGCTGGGGACTCCAGCTAAGCTCCAGGGGTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGGAGGGGCAGGAGCTGGGGACTCCAGCTAAGCTCCAGGGGTCCC  600

seq1  AAGGCGGTTTTTCTTTCTTCAGCTGCTTGGGGGACTAAAATTGTCAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGGTTTTTCTTTCTTCAGCTGCTTGGGGGACTAAAATTGTCAGTTT  650

seq1  CTGTGTGTAGCATTTTCAGGATTCGGAGAACATTTTTCTTATGCATGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTAGCATTTTCAGGATTCGGAGAACATTTTTCTTATGCATGTTC  700

seq1  ATCTGGTTTCTGGAGCCATTTGACTCACTCTTTTATAACATTTAAAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTTTCTGGAGCCATTTGACTCACTCTTTTATAACATTTAAAAAAT  750

seq1  TAACAATGTGTGTGTGTGTGTGTGTGTGTGTGTG  784
      ||||||||||||||||||||||||||||||||||
seq2  TAACAATGTGTGTGTGTGTGTGTGTGTGTGTGTG  784

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information