BAC Information

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BAC

Clone NameB6Ng01-030P10
Chromosome9 (Build37)
Map Location 101,356,358 - 101,453,595
singlet/doubletdoublet
Overlap genenone
Upstream geneIl20rb, Nck1, LOC633385, Tmem22, LOC667486, Stag1, LOC100040990, Pccb, LOC100041013, LOC100040707, Msl2l1, 3222402P14Rik, LOC100041065, EG382099
Downstream geneEphb1, 9630041A04Rik, Ky, LOC664843
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030P10.bB6Ng01-030P10.g
ACCDH860712DH860713
length363889
definitionDH860712|Mus musculus domesticus DNA, BAC clone: B6Ng01-030P10, 5' end.DH860713|Mus musculus domesticus DNA, BAC clone: B6Ng01-030P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,453,233 - 101,453,595)(101,356,358 - 101,357,249)
sequence
actaataaagatgggaagagaattcatttagaaggtatacaattgtgcat
catgagttaggcaactaaatgtagattattaatttatagtctcaaagaag
taggtttctgaacaatggaaaaaagagtagtcagagtctcgaccacagag
aactcagcaaatggtgtctccttgtgagaatttcccaacctagtcagaaa
tttgacaggatatgaaaacacaggtttttctgtggtttaaatataaactt
ttcccaccatcccccatataccctcgtgacaatcacttggtccctgcatg
gtagtactgatttggaaggatgtgcaagccctcactgagaggagagggag
ggatggaggaagg
gaattctggagaggagcaagagttggattcaatcatatattgattttcgg
cccagtaaattgtggctgcttcgtacaagggtaacaagtacgctgctgtg
cttttcagagagagagagagagagagagagagagagagagagagagagag
agagagagagacacgcaatcaacctttaaacaataaagaagatctctgct
gggcagaatgattcgatttaaatcccgatgaaagccagcggtgagtttaa
aaacaaagcagcatcaaaccccacagccacacccagaaccccacatccat
ggtaaaacagatggcagtatttaagccaaccaaggtgcattttaaagaaa
tcaaattcctttgaggataatggactagatttagctgatggatcgtaggg
gctacacagttagccatcccttttccaggcatgatggaagaatttagtac
cacaattggtctttaatgggcacctgaggggcatatgggaagggcctctg
tctctgggttcctgggctcatctttgaggctgaagtttgtcttaggtcca
caagattttccaaattgaggctcaactctctcaactgtgcctcctcagct
ttgattttggggtgtcagggtatcagatgctgcctgcctgagcagagaga
tggagaacagttttgagatgtcgggaaactgcccttaacccagctttctg
ggtttagccctaggtttgtggcttagttattttttgatgttctaatcatt
agtgagagaatgcttccattatgtgtggatcttagatcatgctcctgaat
tcataaggcttagggccttatgaatatgtgaatggatgtgaatgaatatg
ggaattatgatatgcatgtgaatattggaagattatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_101453233_101453595
seq2: B6Ng01-030P10.b_49_411 (reverse)

seq1  CCTTCCTCCATCCCTCCCTCTCCTCTCAGTGAGGGCTTGCACATCCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTCCATCCCTCCCTCTCCTCTCAGTGAGGGCTTGCACATCCTTCC  50

seq1  AAATCAGTACTACCATGCAGGGACCAAGTGATTGTCACGAGGGTATATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTACTACCATGCAGGGACCAAGTGATTGTCACGAGGGTATATGG  100

seq1  GGGATGGTGGGAAAAGTTTATATTTAAACCACAGAAAAACCTGTGTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGTGGGAAAAGTTTATATTTAAACCACAGAAAAACCTGTGTTTTC  150

seq1  ATATCCTGTCAAATTTCTGACTAGGTTGGGAAATTCTCACAAGGAGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTGTCAAATTTCTGACTAGGTTGGGAAATTCTCACAAGGAGACAC  200

seq1  CATTTGCTGAGTTCTCTGTGGTCGAGACTCTGACTACTCTTTTTTCCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCTGAGTTCTCTGTGGTCGAGACTCTGACTACTCTTTTTTCCATT  250

seq1  GTTCAGAAACCTACTTCTTTGAGACTATAAATTAATAATCTACATTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAAACCTACTTCTTTGAGACTATAAATTAATAATCTACATTTAGT  300

seq1  TGCCTAACTCATGATGCACAATTGTATACCTTCTAAATGAATTCTCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAACTCATGATGCACAATTGTATACCTTCTAAATGAATTCTCTTCC  350

seq1  CATCTTTATTAGT  363
      |||||||||||||
seq2  CATCTTTATTAGT  363

seq1: chr9_101356358_101357249
seq2: B6Ng01-030P10.g_66_953

seq1  GAATTCTGGAGAGGAGCAAGAGTTGGATTCAATCATATATTGATTTTCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGAGGAGCAAGAGTTGGATTCAATCATATATTGATTTTCGG  50

seq1  CCCAGTAAATTGTGGCTGCTTCGTACAAGGGTAACAAGTACGCTGCTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAAATTGTGGCTGCTTCGTACAAGGGTAACAAGTACGCTGCTGTG  100

seq1  CTTTTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  150

seq1  AGAGAGAGAGACACGCAATCAACCTTTAAACAATAAAGAAGATCTCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGACACGCAATCAACCTTTAAACAATAAAGAAGATCTCTGCT  200

seq1  GGGCAGAATGATTCGATTTAAATCCCGATGAAAGCCAGCGGTGAGTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAATGATTCGATTTAAATCCCGATGAAAGCCAGCGGTGAGTTTAA  250

seq1  AAACAAAGCAGCATCAAACCCCACAGCCACACCCAGAACCCCACATCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGCAGCATCAAACCCCACAGCCACACCCAGAACCCCACATCCAT  300

seq1  GGTAAAACAGATGGCAGTATTTAAGCCAACCAAGGTGCATTTTAAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAACAGATGGCAGTATTTAAGCCAACCAAGGTGCATTTTAAAGAAA  350

seq1  TCAAATTCCTTTGAGGATAATGGACTAGATTTAGCTGATGGATCGTAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCCTTTGAGGATAATGGACTAGATTTAGCTGATGGATCGTAGGG  400

seq1  GCTACACAGTTAGCCATCCCTTTTCCAGGCATGATGGAAGAATTTAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACAGTTAGCCATCCCTTTTCCAGGCATGATGGAAGAATTTAGTAC  450

seq1  CACAATTGGTCTTTAATGGGCACCTGAGGGGCATATGGGAAGGGCCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTGGTCTTTAATGGGCACCTGAGGGGCATATGGGAAGGGCCTCTG  500

seq1  TCTCTGGGTTCCTGGGCTCATCTTTGAGGCTGAAGTTTGTCTTAGGTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGTTCCTGGGCTCATCTTTGAGGCTGAAGTTTGTCTTAGGTCCA  550

seq1  CAAGATTTTCCAAATTGAGGCTCAACTCTCTCAACTGTGCCTCCTCAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTTTCCAAATTGAGGCTCAACTCTCTCAACTGTGCCTCCTCAGCT  600

seq1  TTGATTTTGGGGTGTCAGGGTATCAGATGCTGCCTGCCTGAGCAGAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGGGGTGTCAGGGTATCAGATGCTGCCTGCCTGAGCAGAGAGA  650

seq1  TGGAGAACAGTTTTGAGATGTCGGGAAACTGCCCTTAACCCAGCTTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAACAGTTTTGAGATGTCGGGAAACTGCCCTTAACCCAGCTTTCTG  700

seq1  GGTTTAGCCCTAGGTTTGTGGCTTAGTTA-TTTTTGATGTTCTAATCATT  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGTTTAGCCCTAGGTTTGTGGCTTAGTTATTTTTTGATGTTCTAATCATT  750

seq1  AGTGAGAGAATGCTTCCATTATGTGTGGATCTTAGATCATGCTCCTGAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTGAGAGAATGCTTCCATTATGTGTGGATCTTAGATCATGCTCCTG-AA  799

seq1  TTCATAAGGCTTAGGGCCCTTATGAATATGTGAATGGATGTGAATGAATA  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTCATAAGGCTTAGGG-CCTTATGAATATGTGAATGGATGTGAATGAATA  848

seq1  TGGGAATTATGAATATGGCATGTGAATATATGAAGATTTATGA  892
      ||||||||||| |||| ||||||||||||  ||||| ||||||
seq2  TGGGAATTATG-ATAT-GCATGTGAATATTGGAAGA-TTATGA  888