BAC Information

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BAC

Clone NameB6Ng01-032I20
Chromosome9 (Build37)
Map Location 80,217,658 - 80,218,559
singlet/doubletsinglet
Overlap geneImpg1
Upstream geneLOC666479, Col12a1, Cox7a2, Tmem30a, Filip1, LOC100041218, LOC666490, Senp6, LOC100041249, Myo6
Downstream geneEG666534
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032I20.bB6Ng01-032I20.g
ACCDH861854DH861855
length1,138903
definitionDH861854|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I20, 5' end.DH861855|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagtttaagcacctgaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagaagccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaaactggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagagcatcatcctgagtgaggtaacacaatcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccagaaa
cttagaatacccaatttgcgaaacacatgcaactcaagaagaacaaagac
caaagtgtggacactttgccccttcttagaattgggaacaaaacacccat
ggaatgagttacagagacaaagtttggagctgagacaaaatgatggacca
tctagagactgccatatccagggacccattccataatcagcctccaactc
tgacaccatttgcatacattagcagattttgctgaaaggacccagatata
gctgtctcttgtgagacttggccagagcctagcaaacacagaagtggatg
ctcacagtcagctaatgatggatcacagggctcccatggaggagctagag
aaagtatctcaaagagctaaagggatcttcaaccctatagtggacactta
tgactaacccagtacccctgagctctgactctagctgctatgtatcagag
atggcctagtcggctacctgaaaaaggtccttgaacccaaattttttgtc
cctgtcagggaacctcggccaatggggggtgatggtcg
gaattcagttagggttacttacaggaacatggatagtggaaaagaaataa
tccatcgcactcccacaactgttaacaacttatatattttcaggaaagga
tgaacccctttctctagcatccattagctgactatatgtccttgaggaaa
gaggaatcttgggagcctcccaacccccactccataggcccatcctatac
aggtctcctgtgggtaatcatagctaccgagagatcaagaaaccaatggt
tagatcatacccagaagaaagggtactacactcccaaaggactctagttc
caaattgtcaccattgaagtttaatcttccaagtatatattttggttgtc
tgcagatgttcaggctatggcaaaagtgacatatttcctacaatattttc
tcccatgcaacattgtgccagtatttcttcctgaagttgtatggttaact
tttttttctttaaaaaaaaaatcttctcaatttttcaatgtgaagtaatt
gagtaacatgtttaagttaagatctctgttgaagttgtcatatggcttag
tttccgctatgcatggacgcatgtcagagtttactcatgcagttactccc
cttagtcatcagcctgtttaccatcaagggatgactctgggagcatctca
acaggggttagtctaattgtttcagtatctcgaagtaggaaggaaacaga
ggctccagggagctgcagagctttagtaaggccgagtacagcacttgctt
catgtgtggagaggctaataaggtggcacatgcctcctgcctctcgtgtg
aaaagcttggtaagattggcaatgcctcttgttcagtgtgtgctgggatg
cttcgtgctgagtgtgtatgctacagggctcttggctgcagctagtgtca
gat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_80217658_80218559
seq2: B6Ng01-032I20.g_69_971

seq1  GAATTCAGTTAGGGTTACTTACAGGAACATGGATAGTGGAAAAGAAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTAGGGTTACTTACAGGAACATGGATAGTGGAAAAGAAATAA  50

seq1  TCCATCGCACTCCCACAACTGTTAACAACTTATATATTTTCAGGAAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCGCACTCCCACAACTGTTAACAACTTATATATTTTCAGGAAAGGA  100

seq1  TGAACCCCTTTCTCTAGCATCCATTAGCTGACTATATGTCCTTGAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCCTTTCTCTAGCATCCATTAGCTGACTATATGTCCTTGAGGAAA  150

seq1  GAGGAATCTTGGGAGCCTCCCAACCCCCACTCCATAGGCCCATCCTATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATCTTGGGAGCCTCCCAACCCCCACTCCATAGGCCCATCCTATAC  200

seq1  AGGTCTCCTGTGGGTAATCATAGCTACCGAGAGATCAAGAAACCAATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCCTGTGGGTAATCATAGCTACCGAGAGATCAAGAAACCAATGGT  250

seq1  TAGATCATACCCAGAAGAAAGGGTACTACACTCCCAAAGGACTCTAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCATACCCAGAAGAAAGGGTACTACACTCCCAAAGGACTCTAGTTC  300

seq1  CAAATTGTCACCATTGAAGTTTAATCTTCCAAGTATATATTTTGGTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTCACCATTGAAGTTTAATCTTCCAAGTATATATTTTGGTTGTC  350

seq1  TGCAGATGTTCAGGCTATGGCAAAAGTGACATATTTCCTACAATATTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGTTCAGGCTATGGCAAAAGTGACATATTTCCTACAATATTTTC  400

seq1  TCCCATGCAACATTGTGCCAGTATTTCTTCCTGAAGTTGTATGGTTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGCAACATTGTGCCAGTATTTCTTCCTGAAGTTGTATGGTTAACT  450

seq1  TTTTTTTCTTTAAAAAAAAAATCTTCTCAATTTTTCAATGTGAAGTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTTTAAAAAAAAAATCTTCTCAATTTTTCAATGTGAAGTAATT  500

seq1  GAGTAACATGTTTAAGTTAAGATCTCTGTTGAAGTTGTCATATGGCTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACATGTTTAAGTTAAGATCTCTGTTGAAGTTGTCATATGGCTTAG  550

seq1  TTTCCGCTATGCATGGACGCATGTCAGAGTTTACTCATGCAGTTACTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGCTATGCATGGACGCATGTCAGAGTTTACTCATGCAGTTACTCCC  600

seq1  CTTAGTCATCAGCCTGTTTACCATCAAGGGATGACTCTGGGAGCATCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCATCAGCCTGTTTACCATCAAGGGATGACTCTGGGAGCATCTCA  650

seq1  ACA-GGGTTAGTCTAATTGTTTCAGTATCTCGAAGTAGGAAGGAAACAGA  699
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGTTAGTCTAATTGTTTCAGTATCTCGAAGTAGGAAGGAAACAGA  700

seq1  GGCTCCAGGGAGCTGCAGAGC-TTAGTAAGGCCGAGTACAGCACTTGCTT  748
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGCTCCAGGGAGCTGCAGAGCTTTAGTAAGGCCGAGTACAGCACTTGCTT  750

seq1  CATGTGTGGAGAGGCTAATAAGGTGGCACATGCCTCCTGCCTCTCGTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGGAGAGGCTAATAAGGTGGCACATGCCTCCTGCCTCTCGTGTG  800

seq1  AAAAGCTTGGTAAGATTGGCAATGCCTCTTGTTCAGTGTGTGCTGGGATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTGGTAAGATTGGCAATGCCTCTTGTTCAGTGTGTGCTGGGATG  850

seq1  CTACGTGCTGAGTGTGTATGCTGACAGGGC-CCTGGCTGCCAGCTAGTGT  897
      || ||||||||||||||||||| ||||||| | |||||| ||||||||||
seq2  CTTCGTGCTGAGTGTGTATGCT-ACAGGGCTCTTGGCTG-CAGCTAGTGT  898

seq1  CAGAT  902
      |||||
seq2  CAGAT  903