BAC Information

Click to search

BAC

Clone NameB6Ng01-032P14
Chromosome9 (Build37)
Map Location 21,925,456 - 22,052,920
singlet/doubletdoublet
Overlap geneAcp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092
Upstream geneTyk2, Cdc37, Pde4a, Keap1, Edg8, Atg4d, BC021438, Cdkn2d, Ap1m2, Slc44a2, Ilf3, Qtrt1, Dnm2, Tmed1, AB124611, Carm1, Yipf2, 1810026J23Rik, EG666043, Smarca4, Ldlr, Spc24, Ankrd25, Dock6, EG624219, Rab3d, BC010787, 2510048L02Rik, BC018242, 2310047B19Rik, Epor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1
Downstream geneZfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, Bbs9, LOC100040805, Bmper
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032P14.bB6Ng01-032P14.g
ACCDH862155DH862156
length1,030868
definitionDH862155|Mus musculus domesticus DNA, BAC clone: B6Ng01-032P14, 5' end.DH862156|Mus musculus domesticus DNA, BAC clone: B6Ng01-032P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,052,366 - 22,052,920)(21,925,456 - 21,926,335)
sequence
gaattcccaggtcttctgctaccaggaactctagctccaggtaattcaac
atccttgaatctccctctgcagctgaagaaggttgctgaggctaggcatg
tccctgtccctgcatggaagtccagagaggctattgtatgaaattgtgaa
ggggaggcctagagactccaagaggttagatatgccagacctgtgggata
cctgcccaggaaagctgctaccagggagtgcaaccagcccaagagaaaga
agtttgttgcagtcaacaaagctgaaaggagctggagagctgaagaacac
tttgatatcaaacatggagatgcagagttgggagtttgccagctggtttt
cagtcctgctttggtccagtcttttctcactaggctctcttccctatgtt
ttagaatggtgatgtgtatcctgtgccgtgatacattgaaagtatgtgct
ctgctttttatttatttatttaatttgaattttattttattttatagggg
attacaattaagaggttgtacaaacctcagaagagactttgaactttgga
ctttaaaacattgttgagactgatagactgtggggattttttgaagttgg
actaaatgcattttgcattatattatggttacaagcctatgggggaagga
agtagaatgtggcagtttgaatagctatggccccattgtcaatggcctga
aaaccttttgataatcatgatctctattgggaagttaaggcaggagaatg
aattcaaagccatcctcagccacatggcatgttccaggttacataagacc
ctgtttcagaaagcaaaaatagagctggctcaatggttaaaaaaacagat
gtccttccagaggatctgagttctatttccagcacccacatgacagctaa
caactgtctataactccaattctaaatccaacaccttttgctggtctctg
acagcaatgtacacgtgtggtccacagatatccatgctggtaaatactca
taacacatgaaataaaaataaataaataac
gaattccttttgtagcccaggttgtcctcagactcatagtgatcttccta
cataagcctcccaagtgttagaattacacacatgagctatcacactaaaa
cctgccatcttgggcagtggtgccgaagcctgtaatcccagcactcagga
ggccaggctggtctacagagctggttccaggacagccaggctatatagag
aaagagagaaagcctgtcttgaacaaagaaggatctgtatgtctgtcttt
ctgtctgtctgtctagccatccaaccatccatccacccatccttctcagc
tcaaggaacagtttatagagtctgagagaaaaataacggagcaagcaagc
tgtaagaaagcgcctctcagggctggagaaatggcttagtggttaagagc
accaactgcccttccaaaggtcccagcaaccacatggtggctcacaacca
tccttaacaaaatctgactccctcttctggactgtctgaagacagctaca
gtgatcttagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaagaaagaaaggaaggaaggaaggaagga
aggaaggaaggaaggaaggaaggaaggaaggactcagcagctggcaagga
ggaaggtgaaggaaagataggccttttatcttaggttcaggaaagcaggc
ggatcaggaaaggaggctgccagcagctgtgtggggttggatgccttcag
gagataagaaaaagtctagtcagatgaagctgtggaggcagacaactgca
aaactgctttttaaacaaacaaatgactaacaaccctcaaatatttattt
tttatagggataggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22052366_22052920
seq2: B6Ng01-032P14.b_46_600 (reverse)

seq1  TAAAGTCCAAAGTTCAAAGTCTCTTCTGAGGTTTGTACAACCTCTTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCCAAAGTTCAAAGTCTCTTCTGAGGTTTGTACAACCTCTTAATT  50

seq1  GTAATCCCCTATAAAATAAAATAAAATTCAAATTAAATAAATAAATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCCCTATAAAATAAAATAAAATTCAAATTAAATAAATAAATAAAA  100

seq1  AGCAGAGCACATACTTTCAATGTATCACGGCACAGGATACACATCACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGCACATACTTTCAATGTATCACGGCACAGGATACACATCACCAT  150

seq1  TCTAAAACATAGGGAAGAGAGCCTAGTGAGAAAAGACTGGACCAAAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAACATAGGGAAGAGAGCCTAGTGAGAAAAGACTGGACCAAAGCAG  200

seq1  GACTGAAAACCAGCTGGCAAACTCCCAACTCTGCATCTCCATGTTTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAAACCAGCTGGCAAACTCCCAACTCTGCATCTCCATGTTTGATA  250

seq1  TCAAAGTGTTCTTCAGCTCTCCAGCTCCTTTCAGCTTTGTTGACTGCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTGTTCTTCAGCTCTCCAGCTCCTTTCAGCTTTGTTGACTGCAAC  300

seq1  AAACTTCTTTCTCTTGGGCTGGTTGCACTCCCTGGTAGCAGCTTTCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTTTCTCTTGGGCTGGTTGCACTCCCTGGTAGCAGCTTTCCTGG  350

seq1  GCAGGTATCCCACAGGTCTGGCATATCTAACCTCTTGGAGTCTCTAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTATCCCACAGGTCTGGCATATCTAACCTCTTGGAGTCTCTAGGCC  400

seq1  TCCCCTTCACAATTTCATACAATAGCCTCTCTGGACTTCCATGCAGGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCACAATTTCATACAATAGCCTCTCTGGACTTCCATGCAGGGAC  450

seq1  AGGGACATGCCTAGCCTCAGCAACCTTCTTCAGCTGCAGAGGGAGATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACATGCCTAGCCTCAGCAACCTTCTTCAGCTGCAGAGGGAGATTCA  500

seq1  AGGATGTTGAATTACCTGGAGCTAGAGTTCCTGGTAGCAGAAGACCTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTTGAATTACCTGGAGCTAGAGTTCCTGGTAGCAGAAGACCTGGG  550

seq1  AATTC  555
      |||||
seq2  AATTC  555

seq1: chr9_21925456_21926335
seq2: B6Ng01-032P14.g_68_935

seq1  GAATTCCTTTTGTAGCCCAGGTTGTCCTCAGACTCATAGTGATCTTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTGTAGCCCAGGTTGTCCTCAGACTCATAGTGATCTTCCTA  50

seq1  CATAAGCCTCCCAAGTGTTAGAATTACACACATGAGCTATCACACTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCCTCCCAAGTGTTAGAATTACACACATGAGCTATCACACTAAAA  100

seq1  CCTGCCATCTTGGGCAGTGGTGCCGAAGCCTGTAATCCCAGCACTCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCATCTTGGGCAGTGGTGCCGAAGCCTGTAATCCCAGCACTCAGGA  150

seq1  GGCCAGGCTGGTCTACAGAGCTGGTTCCAGGACAGCCAGGCTATATAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGCTGGTCTACAGAGCTGGTTCCAGGACAGCCAGGCTATATAGAG  200

seq1  AAAGAGAGAAAGCCTGTCTTGAACAAAGAAGGATCTGTATGTCTGTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGAAAGCCTGTCTTGAACAAAGAAGGATCTGTATGTCTGTCTTT  250

seq1  CTGTCTGTCTGTCTAGCCATCCAACCATCCATCCACCCATCCTTCTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTGTCTAGCCATCCAACCATCCATCCACCCATCCTTCTCAGC  300

seq1  TCAAGGAACAGTTTATAGAGTCTGAGAGAAAAATAACGGAGCAAGCAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAACAGTTTATAGAGTCTGAGAGAAAAATAACGGAGCAAGCAAGC  350

seq1  TGTAAGAAAGCGCCTCTCAGGGCTGGAGAAATGGCTTAGTGGTTAAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAAAGCGCCTCTCAGGGCTGGAGAAATGGCTTAGTGGTTAAGAGC  400

seq1  ACCAACTGCCCTTCCAAAGGTCCCAGCAACCACATGGTGGCTCACAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTGCCCTTCCAAAGGTCCCAGCAACCACATGGTGGCTCACAACCA  450

seq1  TCCTTAACAAAATCTGACTCCCTCTTCTGGACTGTCTGAAGACAGCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAACAAAATCTGACTCCCTCTTCTGGACTGTCTGAAGACAGCTACA  500

seq1  GTGATCTTAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  550
      ||||||||    ||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTT----AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  546

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGA  596

seq1  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGACTCAGCAGCTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGACTCAGCAGCTGGCA  646

seq1  AGGAGGAAGGTGAAGGAAAGATAGGCCTTTTATCTTAGGTTCAGGAAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGGAGGAAGGTGAAGGAAAGATAGGCCTTTTATCTTAGGTTCAGGAAAGC  696

seq1  AGGCAGGATCAGGAAAGGAGGCTGCCAGCAGCTGTGTGGGGTTGGATGCC  750
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGC-GGATCAGGAAAGGAGGCTGCCAGCAGCTGTGTGGGGTTGGATGCC  745

seq1  TTCAGGAGATAAGAAAAAGTCTAGTCAGATGAAGCTGTGGAGGCAGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAGATAAGAAAAAGTCTAGTCAGATGAAGCTGTGGAGGCAGACAA  795

seq1  CTGCAAAAACTGCTTTTTTAAACAAACAAATGAACTAACAAACCCTCAAA  850
      |||| |||||||| |||||||||||||||||| |||||| ||||||| ||
seq2  CTGC-AAAACTGC-TTTTTAAACAAACAAATG-ACTAAC-AACCCTC-AA  840

seq1  ATATTTATTTTATTAGTAGGGATAGGAGGA  880
      ||||||||||| ||| ||||||||||||||
seq2  ATATTTATTTT-TTA-TAGGGATAGGAGGA  868