BAC Information

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BAC

Clone NameB6Ng01-032P21
Chromosome9 (Build37)
Map Location 114,780,451 - 114,923,133
singlet/doubletdoublet
Overlap geneGpd1l, LOC100043813
Upstream geneClasp2, Ubp1, Fbxl2, Susd5, EG665719, 4921528I07Rik, Bcl2a1c, 4930520O04Rik, Crtap, Glb1, Ccr4, Trim71, LOC100043808, Cnot10, LOC665772, Dync1li1, Cmtm6, Cmtm7, Cmtm8
Downstream geneOsbpl10, LOC100043812, Stt3b, LOC100039567, LOC670467, EG546164, Gadl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032P21.bB6Ng01-032P21.g
ACCDH862167DH862168
length1,099692
definitionDH862167|Mus musculus domesticus DNA, BAC clone: B6Ng01-032P21, 5' end.DH862168|Mus musculus domesticus DNA, BAC clone: B6Ng01-032P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,780,451 - 114,781,567)(114,922,442 - 114,923,133)
sequence
gaattcactttgtagaccaggctggccttaaactcagaaatcagcctgcc
tctgcctccagagtgctgggattaaaggagtgtgccaccacacccggctt
catcgccttgtttcttaagacaggctccctcactggcctggaactcacca
agtaggcaaggctggctggtggtacagccccagagacccacctatctctg
cctccctacccctggaatgatgaacacctaccaccacatacagccttttt
gcctaggttctgggggtcaacttcaggcccttatgcttgaatgataagca
ctttactgtgacctttgtgtagccacctgacaccacattgaaagctggag
tggatgttaagccagagcctttggtgagccccgtgttggtttgtgtgcag
cgccatcttagtttaaatcagaagaatttacagtagcaagcggtattgac
agtattgacatgtaaatcacatatgtacttagtggtaataagatgggaaa
taaaattttctttaaagtatgatttaaattcatttctttcagcacatggc
ttccaatggcagccagtagtatccttagcaataataagaatgcatatgcc
agtatcctagccgaaacataaaagcctgccttcagggccatgtttacatc
agtccccgaaaataccacattctaatttatgtggggattatcttcagctc
atacatcgtgcccttctctcttgttacaggtagaaaaatcaaagcaaata
aatatgataatgtgtctatttccaaaatggttttttctagttattaagaa
cgggctttggggcttgggaaacaatcacagtatatctttatacaccacgg
ttacccgagacacgtatcaaaacctttgcaaagtcaaagatctttaagag
cgatgagaaagatggctccctaagtagaatgcctgctatgtaaatgcgag
gacctgagtcagattctagtgctcaatagaagcagtgtggccatgtgctt
ctgtacaacctgggggggggccgctgcggactggagcactgtttggcttg
caggccttcactaactcaggttcagtgaagacctgtcactaagaatgct
gaattcagaatgttatttatgatggtgacagattcaaagcccctcagttg
gaagctggaagatgctcagttggtacagtacttgccacccaagtgtggag
gcattagtttggatccccagaacctatataaaagtggggtacagtgccac
atgcatctgtaatcccagggctccctcagaaagatggggacagagacagg
acagcccacagacgtcctcgggtcagtttaagatcctcaaactgagtgga
aggatagtactgacacacaaggttgtcttcaacctccacatacgcactgt
ggcatgcatgcacctacaatgatacacatgcacacacacgcgctcatgca
cgcgtacacacacacaaactttcaattaagaatttttaatgatttccata
ttattttctgtgtagtctttccactactacactggcagtaagtcccagca
cccccccccccacatacacacacagaatagagagacagcactgggtgtgg
ctgggcaggttcccagtgccagtacctgcctgtgagctacataagacccc
ttaggagatttccttgcagaggagagggagcaagagtaaagcagaagggt
aaaatggagaacagtcccttctcactgagtggttagatgtggggccgagg
gagagggatcgtggtctgaatggtgtgtggcattcttagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_114780451_114781567
seq2: B6Ng01-032P21.b_45_1143

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTTAAACTCAGAAATCAGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTTAAACTCAGAAATCAGCCTGCC  50

seq1  TCTGCCTCCAGAGTGCTGGGATTAAAGGAGTGTGCCACCACACCCGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCAGAGTGCTGGGATTAAAGGAGTGTGCCACCACACCCGGCTT  100

seq1  CATCGCCTTGTTTCTTAAGACAGGCTCCCTCACTGGCCTGGAACTCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGCCTTGTTTCTTAAGACAGGCTCCCTCACTGGCCTGGAACTCACCA  150

seq1  AGTAGGCAAGGCTGGCTGGTGGTACAGCCCCAGAGACCCACCTATCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGCAAGGCTGGCTGGTGGTACAGCCCCAGAGACCCACCTATCTCTG  200

seq1  CCTCCCTACCCCTGGAATGATGAACACCTACCACCACATACAGCCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTACCCCTGGAATGATGAACACCTACCACCACATACAGCCTTTTT  250

seq1  GCCTAGGTTCTGGGGGTCAACTTCAGGCCCTTATGCTTGAATGATAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGTTCTGGGGGTCAACTTCAGGCCCTTATGCTTGAATGATAAGCA  300

seq1  CTTTACTGTGACCTTTGTGTAGCCACCTGACACCACATTGAAAGCTGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTGTGACCTTTGTGTAGCCACCTGACACCACATTGAAAGCTGGAG  350

seq1  TGGATGTTAAGCCAGAGCCTTTGGTGAGCCCCGTGTTGGTTTGTGTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTTAAGCCAGAGCCTTTGGTGAGCCCCGTGTTGGTTTGTGTGCAG  400

seq1  CGCCATCTTAGTTTAAATCAGAAGAATTTACAGTAGCAAGCGGTATTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATCTTAGTTTAAATCAGAAGAATTTACAGTAGCAAGCGGTATTGAC  450

seq1  AGTATTGACATGTAAATCACATATGTACTTAGTGGTAATAAGATGGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGACATGTAAATCACATATGTACTTAGTGGTAATAAGATGGGAAA  500

seq1  TAAAATTTTCTTTAAAGTATGATTTAAATTCATTTCTTTCAGCACATGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTCTTTAAAGTATGATTTAAATTCATTTCTTTCAGCACATGGC  550

seq1  TTCCAATGGCAGCCAGTAGTATCCTTAGCAATAATAAGAATGCATATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATGGCAGCCAGTAGTATCCTTAGCAATAATAAGAATGCATATGCC  600

seq1  AGTATCCTAGCCGAAACATAAAAGCCTGCCTTCAGGGCCATGTTTACATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCTAGCCGAAACATAAAAGCCTGCCTTCAGGGCCATGTTTACATC  650

seq1  AGTCCCCGAAAATACCACATTCTAATTTATGTGGGGATTATCTTCAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCGAAAATACCACATTCTAATTTATGTGGGGATTATCTTCAGCTC  700

seq1  ATACATCGTGCCCTTCTCTCTTGTTACAGGTAGAAAAATCAAAGCAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCGTGCCCTTCTCTCTTGTTACAGGTAGAAAAATCAAAGCAAATA  750

seq1  AATATGATAATGTGTCTATTTCCAAAATGGTTTTTTCTAGTTATTAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATAATGTGTCTATTTCCAAAATGGTTTTTTCTAGTTATTAAGAA  800

seq1  CGGGCTTTGGGGCTTGGGAAACAATCACAGTATATCTTTATACACCACGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCTTTGGGGCTTGGGAAACAATCACAGTATATCTTTATACACCACGG  850

seq1  TTACCCGAGACACGTATCAAAACCTTTGCAAAGTCAAAGATCTTTAAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCGAGACACGTATCAAAACCTTTGCAAAGTCAAAGATCTTTAAGAG  900

seq1  CGATGAGAAAGATGGCTCCCTAAGTAAGAATGCCTGCTATGTAAATGCGA  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CGATGAGAAAGATGGCTCCCTAAGT-AGAATGCCTGCTATGTAAATGCGA  949

seq1  GGACCTGAGGTTCAGATTCTAGTGCTCAAATAAGAAGCAGTGTGGCCATG  1000
      |||||||||  ||||||||||||||||||   ||||||||||||||||||
seq2  GGACCTGAG--TCAGATTCTAGTGCTCAA--TAGAAGCAGTGTGGCCATG  995

seq1  TGCTTCCTGTAACACCCTGGGGGGGGGGGCCGCTGCGGGGACAGGAGCAC  1050
      ||||| |||| ||| |||  ||||||||||||||||  |||| |||||||
seq2  TGCTT-CTGT-ACAACCT--GGGGGGGGGCCGCTGC--GGACTGGAGCAC  1039

seq1  TGTTTGGGCTTGCAGGCCACTCACCTAGCTCCAGGTTCAGTGAGAGACCT  1100
      ||||| ||||||||||||  ||| ||| || |||||||||||| ||||||
seq2  TGTTT-GGCTTGCAGGCC-TTCA-CTAACT-CAGGTTCAGTGA-AGACCT  1084

seq1  GGTCACCAGAGAATGCT  1117
       ||||| | ||||||||
seq2  -GTCACTA-AGAATGCT  1099

seq1: chr9_114922442_114923133
seq2: B6Ng01-032P21.g_71_762 (reverse)

seq1  GGACTAAGAATGCCACACACCATTCAGACCACGATCCCTCTCCCTCGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAAGAATGCCACACACCATTCAGACCACGATCCCTCTCCCTCGGCC  50

seq1  CCACATCTAACCACTCAGTGAGAAGGGACTGTTCTCCATTTTACCCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTAACCACTCAGTGAGAAGGGACTGTTCTCCATTTTACCCTTCT  100

seq1  GCTTTACTCTTGCTCCCTCTCCTCTGCCAGGAAATCTCCTAAGGGGTCTT  150
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCTTTACTCTTGCTCCCTCTCCTCTGCAAGGAAATCTCCTAAGGGGTCTT  150

seq1  ATGTAGCTCACAGGCAGGTACTGGCACTGGGAACCTGCCCAGCCACACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCTCACAGGCAGGTACTGGCACTGGGAACCTGCCCAGCCACACCC  200

seq1  AGTGCTGTCTCTCTATTCTGTGTGTGTATGTGGGGGGGGGGGTGCTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGTCTCTCTATTCTGTGTGTGTATGTGGGGGGGGGGGTGCTGGGA  250

seq1  CTTACTGCCAGTGTAGTAGTGGAAAGACTACACAGAAAATAATATGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGCCAGTGTAGTAGTGGAAAGACTACACAGAAAATAATATGGAAA  300

seq1  TCATTAAAAATTCTTAATTGAAAGTTTGTGTGTGTGTACGCGTGCATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAAATTCTTAATTGAAAGTTTGTGTGTGTGTACGCGTGCATGAG  350

seq1  CGCGTGTGTGTGCATGTGTATCATTGTAGGTGCATGCATGCCACAGTGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTGTGTGTGCATGTGTATCATTGTAGGTGCATGCATGCCACAGTGCG  400

seq1  TATGTGGAGGTTGAAGACAACCTTGTGTGTCAGTACTATCCTTCCACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGAGGTTGAAGACAACCTTGTGTGTCAGTACTATCCTTCCACTCA  450

seq1  GTTTGAGGATCTTAAACTGACCCGAGGACGTCTGTGGGCTGTCCTGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGATCTTAAACTGACCCGAGGACGTCTGTGGGCTGTCCTGTCTC  500

seq1  TGTCCCCATCTTTCTGAGGGAGCCCTGGGATTACAGATGCATGTGGCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCATCTTTCTGAGGGAGCCCTGGGATTACAGATGCATGTGGCACT  550

seq1  GTACCCCACTTTTATATAGGTTCTGGGGATCCAAACTAATGCCTCCACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCCACTTTTATATAGGTTCTGGGGATCCAAACTAATGCCTCCACAC  600

seq1  TTGGGTGGCAAGTACTGTACCAACTGAGCATCTTCCAGCTTCCAACTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGGCAAGTACTGTACCAACTGAGCATCTTCCAGCTTCCAACTGAG  650

seq1  GGGCTTTGAATCTGTCACCATCATAAATAACATTCTGAATTC  692
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTGAATCTGTCACCATCATAAATAACATTCTGAATTC  692