BAC Information

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BAC

Clone NameB6Ng01-037N08
Chromosome9 (Build37)
Map Location 9,672,301 - 9,672,913
singlet/doubletsinglet
Overlap geneCntn5
Upstream geneTrpc6, Pgr, 9030420J04Rik
Downstream geneLOC665154, LOC100039970
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037N08.bB6Ng01-037N08.g
ACCDH865577DH865578
length848615
definitionDH865577|Mus musculus domesticus DNA, BAC clone: B6Ng01-037N08, 5' end.DH865578|Mus musculus domesticus DNA, BAC clone: B6Ng01-037N08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcctatatctaaacataataaaagcaatatacagcaaacca
gtagcaaacatctaactaaattgagagaaacttgaagcaattccactaaa
atcagggactagaataggctgcccaatttctccctacctattaatataat
ataataattcataatatagtacttgaagtcctagccagagcaattagaca
acaaaagtagagcaaggggatacaaattggaaaggaagaagtcaaaatat
cactatttgcagatgataagatagcatatataagtgactaaaaattccac
cagagaactcctaaatctgatatacaacttcagtgcagtagctggatata
aagtcacctcaaacaaagcaatagcctttgtctacacaaaggataaacag
gctaagaaagaacttagggaaacaacacccttcacaacattcatgaataa
tataaaataccttggtgtgactctaattaagaaagtgaaagatctgtaat
gataagaacttcaagtctctgaagaaagaaatcaaagaaggtctcagaat
atggaaaggtctcccatgctcatggattggcagattaatagagtaaaaat
ggctatcttgctgaaagcaatctacagattcaatgcaatccccatcaaaa
tttccaactcaattcttcactgtgttagatagagcaatttgcaaattcat
ctgggataacataaaaacctaggatagcaaaaaactattctcaacaataa
aagaatgtctggtgggaatcaccatgcctgacctcaaactgtactacaga
gcaattgttgataaaaacttgcatggtactggtacagccacagacatg
gaattccggatcctgttgttttattctactcttttctttcagatgccttt
gtggttttggaactgagtttgactgttgcctcccacaccacaggcaagca
ttcattcttagacagacacaatacaatcaaaaggtctttcatatgatcca
gttgtctggccccaatttgccaaaagtatgtctctaagttgagacatctc
agagataattgcatatcagtgatgctatccatgatagataaattatggaa
acaatttagatgttcaacatcagaggactggataagagaaatacatgcaa
tgaaatttccttctctctatgtcatttgcaggaaaatggatgccactgga
acaaattgtgttaagcaagttaagccgactgcacaaagacaaatgccata
tatgcttcccattcctgggtcatagattcttctataaaaatataaaacca
aataaaaaaccataaatgtatatatgaaaataaattagaagtagaattgt
ttaaggcagtagttctccatcagtgtatcatgacccctttgagggtaaaa
tgacctttttcacagaggtcacatatcagatattctgcttacaaaaatat
ttactttgtgattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_9672301_9672913
seq2: B6Ng01-037N08.g_69_683

seq1  GAATTCAGGATCCTGTTGTTTTATTCTACTCTTTTCTTTCAGATGCCTTT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGGATCCTGTTGTTTTATTCTACTCTTTTCTTTCAGATGCCTTT  50

seq1  GTGGTTTTGGAACTGAGTTTGACTGTTGCCTCCCACACCACAGGCAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTGGAACTGAGTTTGACTGTTGCCTCCCACACCACAGGCAAGCA  100

seq1  TTCATTCTTAGACAGACACAATACAATCAAAAGGTCTTTCATATGATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTTAGACAGACACAATACAATCAAAAGGTCTTTCATATGATCCA  150

seq1  GTTGTCTGGCCCCAATTTGCCAAAAGTATGTCTCTAAGTTGAGACATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTGGCCCCAATTTGCCAAAAGTATGTCTCTAAGTTGAGACATCTC  200

seq1  AGAGATAATTGCATATCAGTGATGCTATCCATGATAGATAAATTATGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAATTGCATATCAGTGATGCTATCCATGATAGATAAATTATGGAA  250

seq1  ACAATTTAGATGTTCAACATCAGAGGACTGGATAAGAGAAATACATGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTAGATGTTCAACATCAGAGGACTGGATAAGAGAAATACATGCAA  300

seq1  TGAAATTTCCTTCTCTCTATGTCATTTGCAGGAAAATGGATGCCACTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTCCTTCTCTCTATGTCATTTGCAGGAAAATGGATGCCACTGGA  350

seq1  ACAAATTGTGTTAAGCAAGTTAAGCCGACTGCACAAAGACAAATGCCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTGTGTTAAGCAAGTTAAGCCGACTGCACAAAGACAAATGCCATA  400

seq1  TATGCTTCCCATTCCTGGGTCATAGATTCTTCTATAAAAATATAAAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTCCCATTCCTGGGTCATAGATTCTTCTATAAAAATATAAAACCA  450

seq1  AATAAAAAACCATAAATGTATATATGAAAATAAATTAGAAGTAGAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAACCATAAATGTATATATGAAAATAAATTAGAAGTAGAATTGT  500

seq1  TTAAGGCAGTAGTTCTCCATCAGTGTATCATGACCCCTTTGAGGGTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGCAGTAGTTCTCCATCAGTGTATCATGACCCCTTTGAGGGTAAAA  550

seq1  TGACC-TTTTCACAGAGGTCACATATCAGATATTCTGCATAC-AAAATAT  598
      ||||| |||||||||||||||||||||||||||||||| ||| |||||||
seq2  TGACCTTTTTCACAGAGGTCACATATCAGATATTCTGCTTACAAAAATAT  600

seq1  TTACTTTGTGATTTA  613
      |||||||||||||||
seq2  TTACTTTGTGATTTA  615