BAC Information

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BAC

Clone NameB6Ng01-042G08
Chromosome9 (Build37)
Map Location 62,366,582 - 62,367,592
singlet/doubletsinglet
Overlap geneCoro2b
Upstream geneRplp1, Kif23, Paqr5, Glce, Spesp1, LOC100039897, Anp32a
Downstream geneItga11, EG665478, Fem1b, Cln6, Calml4, Pias1, LOC100039976, Ppia-ps9_818.1, Lbxcor1, Map2k5, 2300009A05Rik, Iqch, LOC621763
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042G08.bB6Ng01-042G08.g
ACCDH868787DH868788
length1,008211
definitionDH868787|Mus musculus domesticus DNA, BAC clone: B6Ng01-042G08, 5' end.DH868788|Mus musculus domesticus DNA, BAC clone: B6Ng01-042G08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcaggcctggagcacaattagacaagatgggtttttgaatca
aggcattaggagacccggatgtccagaaaggcatatgacagtctcctagg
ggagggttgagcctaggaggggacactgtagtcacagggtcaccagggcc
tgccactctaggatggagaaccgacttgtcctggggagcaattctctaaa
attgttccagggcagccctgtttcagtctgggtaagaagggggtgaagaa
tgaacccccaatttattctagattcttctgtccctgaaacaggggagagg
ctgtcatctgtactctctagaaaatgtgccaaccagtgagcctcatgtga
ctgaagctacgctgcacacagaggagatgagctgactttcttgagcaaaa
tacaggcacatcatgcaatagtctcaaattcagtggttctcaacccgtgg
gtggcgacccctttggaggttgaatatccctttcacaggggtcgcctaag
accatcagaaaatacatcatgattcataacaatagcaaaattagttatga
agaagcaacaagagtaatgctatggttgggggtcaccaacacatgaggaa
ctgtaataaagggtctccgaatgaggaaggtcaagagccactgctttaat
tgaacgcacacagcaccaggcatagagggagcacgccctgctgcactcct
aacctgctgccgcaggcctcagggctcactctgtggcagtaaggctgaga
tgcattcttgatgcatccatgtcatcctggcagggacctgcggccagagc
gcacgctgactgggctgtaagggataagatcaggagtttctccggtgcga
aagtgggcagggatggtttagcctgagtttgaggggagcagcagaacagt
gggtgatctaaacagaagttaaagaagtgtacagcggccagagatgggag
caccaataatccggttagtggtttggtcagaagatgcttgcgggcaggcc
ctcatctg
taagcaggggaaattgcaaacatactagagtttgcaaaccaacaaaggct
cagtgtgctgggttggggaggtggagggtctggcaatgcagctcagttgg
taaaatgactgcctagcatacacaaggccctgggatcaatctgttgcact
gcctaaagtgtgtggagttgaagaaaacctgtaatcccataacgtgtgat
ggggatacagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_62366582_62367592
seq2: B6Ng01-042G08.b_42_1048

seq1  GAATTCACTCAGGCCTGGAGCACAATTAGACAAGATGGGTTTTTGAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGGCCTGGAGCACAATTAGACAAGATGGGTTTTTGAATCA  50

seq1  AGGCATTAGGAGACCCGGATGTCCAGAAAGGCATATGACAGTCTCCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTAGGAGACCCGGATGTCCAGAAAGGCATATGACAGTCTCCTAGG  100

seq1  GGAGGGTTGAGCCTAGGAGGGGACACTGTAGTCACAGGGTCACCAGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTTGAGCCTAGGAGGGGACACTGTAGTCACAGGGTCACCAGGGCC  150

seq1  TGCCACTCTAGGATGGAGAACCGACTTGTCCTGGGGAGCAATTCTCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTCTAGGATGGAGAACCGACTTGTCCTGGGGAGCAATTCTCTAAA  200

seq1  ATTGTTCCAGGGCAGCCCTGTTTCAGTCTGGGTAAGAAGGGGGTGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCCAGGGCAGCCCTGTTTCAGTCTGGGTAAGAAGGGGGTGAAGAA  250

seq1  TGAACCCCCAATTTATTCTAGATTCTTCTGTCCCTGAAACAGGGGAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCCCAATTTATTCTAGATTCTTCTGTCCCTGAAACAGGGGAGAGG  300

seq1  CTGTCATCTGTACTCTCTAGAAAATGTGCCAACCAGTGAGCCTCATGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATCTGTACTCTCTAGAAAATGTGCCAACCAGTGAGCCTCATGTGA  350

seq1  CTGAAGCTACGCTGCACACAGAGGAGATGAGCTGACTTTCTTGAGCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCTACGCTGCACACAGAGGAGATGAGCTGACTTTCTTGAGCAAAA  400

seq1  TACAGGCACATCATGCAATAGTCTCAAATTCAGTGGTTCTCAACCCGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCACATCATGCAATAGTCTCAAATTCAGTGGTTCTCAACCCGTGG  450

seq1  GTGGCGACCCCTTTGGAGGTTGAATATCCCTTTCACAGGGGTCGCCTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGACCCCTTTGGAGGTTGAATATCCCTTTCACAGGGGTCGCCTAAG  500

seq1  ACCATCAGAAAATACATCATGATTCATAACAATAGCAAAATTAGTTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCAGAAAATACATCATGATTCATAACAATAGCAAAATTAGTTATGA  550

seq1  AGAAGCAACAAGAGTAATGCTATGGTTGGGGGTCACCAACACATGAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAACAAGAGTAATGCTATGGTTGGGGGTCACCAACACATGAGGAA  600

seq1  CTGTAATAAAGGGTCTCCGAATGAGGAAGGTCAAGAGCCACTGCTTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATAAAGGGTCTCCGAATGAGGAAGGTCAAGAGCCACTGCTTTAAT  650

seq1  TGAACGCACACAGCACCAGGCATAGAGGGAGCACGCCCTGCTGCACTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGCACACAGCACCAGGCATAGAGGGAGCACGCCCTGCTGCACTCCT  700

seq1  AACCTGCTGCCGCAGGCCTCAGGGCTCACTCTGTGGCAGTAAGGCTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCTGCCGCAGGCCTCAGGGCTCACTCTGTGGCAGTAAGGCTGAGA  750

seq1  TGCATTCTGGATGCATCCATGTCATCCTGGCAGGGACCTGCGGCCAGAGC  800
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTTGATGCATCCATGTCATCCTGGCAGGGACCTGCGGCCAGAGC  800

seq1  GCACGCTGACTGGGCTGTAAGGGATAAGATCAGGAAGTTTCTCCGGTGCG  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCACGCTGACTGGGCTGTAAGGGATAAGATCAGG-AGTTTCTCCGGTGCG  849

seq1  AAAGTGGGCAGGGATGG-TTAGCCTGAGTTTGAGGGGAGCAAGCAGAACA  899
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  AAAGTGGGCAGGGATGGTTTAGCCTGAGTTTGAGGGGAGC-AGCAGAACA  898

seq1  GTGGGTGATCTAAACAGAAGTTAAAGAAGTGTACAGCGGCCAGAGATGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGATCTAAACAGAAGTTAAAGAAGTGTACAGCGGCCAGAGATGGG  948

seq1  AGCATCCAATATCCAGGTGAGTGGTTTGGTCAGAAAGATGCTGGCGGGCA  999
      |||| ||||||  | ||| |||||||||||||| |||||||| |||||||
seq2  AGCA-CCAATAATCCGGTTAGTGGTTTGGTCAG-AAGATGCTTGCGGGCA  996

seq1  GGTCCCTCATCT  1011
      || |||||||||
seq2  GG-CCCTCATCT  1007