BAC Information

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BAC

Clone NameB6Ng01-044K03
Chromosome9 (Build37)
Map Location 37,070,198 - 37,071,312
singlet/doubletsinglet
Overlap genenone
Upstream geneEG639025, LOC671003, EG434396, A630095E13Rik, Acrv1, Chek1, Stt3a, Ei24, LOC627681, Fez1, Pknox2, LOC100042545, 1810021J13Rik, Slc37a2, LOC100042561
Downstream geneCcdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044K03.bB6Ng01-044K03.g
ACCDH870330DH870331
length1,1081,167
definitionDH870330|Mus musculus domesticus DNA, BAC clone: B6Ng01-044K03, 5' end.DH870331|Mus musculus domesticus DNA, BAC clone: B6Ng01-044K03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgagatagcatatgtacagtggctagcacatagtaagtaaag
tgaatattttacactaacagcagaattactatctccagtatcattcttaa
taccatatgtgaatatccctatacagccattgtagatgttctttaacaat
taaagaggcaaggccttctctataacacaagcacattggtccattgctgt
ttcagcgtctcttaatgagctgagctaatacaagtacctctagtatggct
tttatgttactgcctaagtaaagacattttctatgttcctaggttatgat
gacatagaatttgaccatttgattttattcattattcctataataagtct
acttagcacaaaaaaaaaaacaagtttttttgaaggtggaagatgaagga
agagagtttgccaaataagtgggtgtgccaattaaattgcaaatcagtct
gtcctccctcttgctcaatctgagggtgagttgatgcctgtttgtaaatc
cttcctggttcaaagctgtaggtaccctcatcaaaggagatccacccacc
tttgaattgctaaaattgagttatggttcagcctaaagaggccaagccta
ccctatgttcccatgtgggcacaatattttctctaaggaattaaaaacat
tttgtcataaagtaaaggtacaagaacatctttttctgtcatgcatcaga
acattgtattgtatacaaggcagcttatcagggagggagactgaagagat
atctcaggggtttagaacactggctgcacttgtaatggacccgggtttga
ttcttaccacccacatgttggcttagccacctgtaattccagctacagga
tccaatgtcctcttctgacttttgctggcaccaggagcacacatggcgta
catacatagatgccagcaaacattcacataagccttaaatgctttaagat
gaaaggaaaactgtaataccactcttgtctttgagggctggtatcagcta
gttttccaggtggctctaactcgtcttaccctgtcaataacttcagtcat
tcacctaaatacagtggagcccagaaagagggttacccagtacattgagg
gcagaact
gaattccatgaaattgaaaggtgtttacacactagcaacaaaatcatttc
tagggtaaagagtctacacaatgagagaaaaatcttttacaactgttcct
ctagtgtggattaatatccagcataaataaagaactcataaagctaaata
ctagatgaacaagttattcaattaataaatgggcaaaaataattggacaa
ttttcaaaagaagtgtaaatagtcaatagatgcgtgggaaaaatgcaaaa
cctggccaggtggtggtggcacattttaaatcccagcatttgggaggcaa
agacaggcagatctctgagatcgagaaaagtctagcctgcagagagttcc
aggacaggcagggccacacagagaaaccatgtcttaaacaaacaaacaaa
caaacaaacaaacaaataacaacaacaaaaacaacctaaataaaaccaaa
aacttatttatcaaggaaattctaatcaaaacaacattgagggtgcatct
cacctcagctggagtggctcttgtggagaacaagaatgctggtgaagatg
ggaaagggaagcacggggaggggcgagaagctgaagcacagtgggtgagg
atttactccagccacatagaaatcagagtggaagttcctcagaacacctc
aaacagaatgcctatgcaatccagacacaccctgctggatacacacctaa
gagaatcaatgtccgaatacaatagagacatcagcacgcctgtgttattg
tggtactactattcacagtagccaagttatagaatcagcctgggtaccca
tcaacagatgaacgatgaagacaatcagacacgtaagcttagcagagttt
aactcagccataaagaagaatgaaatcctgtcattggcaaatggatggaa
ctgaagatctttgtgttaagccacaaattcagaaagacaaatgttgcatt
ttttgactcatggcagcatctagattttttttttacacaaaaatagaaga
aagaaaaggagcagcgggaggggaggccttatgagtgaggatgggtttgg
tccagatattataccagccactgggaaaatgtcctgcccctattttggca
gtccgatatccggaataatttgaatcccatgccaatgggtgtgtcctatg
ctagacggggaaccatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37070198_37071312
seq2: B6Ng01-044K03.b_47_1154 (reverse)

seq1  AGTTCTTGCTCCTC-ATGTACCTGTGTAACCCTC-TTCTGGGCTCCACTG  48
      ||||| ||| |||| ||||| ||| ||||||||| |||||||||||||||
seq2  AGTTC-TGC-CCTCAATGTA-CTGGGTAACCCTCTTTCTGGGCTCCACTG  47

seq1  TATCTAAGGTGAATGACTGAAGTTATTGACAGGGTAAGAACGAGTTAGAG  98
      ||| | |||||||||||||||||||||||||||||||| |||||||||||
seq2  TAT-TTAGGTGAATGACTGAAGTTATTGACAGGGTAAG-ACGAGTTAGAG  95

seq1  CCACATGGAAAAACTAGCTGATACCAGCCCCTCAAAGACAAGAGTGGTAT  148
      |||| ||| |||||||||||||||||| ||||||||||||||||||||||
seq2  CCACCTGG-AAAACTAGCTGATACCAG-CCCTCAAAGACAAGAGTGGTAT  143

seq1  TACAGTTTTTCCTTTCATCTTAAAGCATTTAAGGCTTATGTGAATGTTTT  198
      ||||| |||||||||||||||||||||||||||||||||||||||| |||
seq2  TACAG-TTTTCCTTTCATCTTAAAGCATTTAAGGCTTATGTGAATG-TTT  191

seq1  GCTGGCATCTATGTATGTACGCCATGTGTGCTCCTGGTGCCAGCAAAAGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCATCTATGTATGTACGCCATGTGTGCTCCTGGTGCCAGCAAAAGT  241

seq1  CAGAAGAGGACATTGGATCCTGTAGCTGGAATTACAGGTGGCTAAGCCAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGACATTGGATCCTGTAGCTGGAATTACAGGTGGCTAAGCCAA  291

seq1  CATGTGGGTGGTAAGAATCAAACCCGGGTCCATTACAAGTGCAGCCAGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGTGGTAAGAATCAAACCCGGGTCCATTACAAGTGCAGCCAGTG  341

seq1  TTCTAAACCCCTGAGATATCTCTTCAGTCTCCCTCCCTGATAAGCTGCCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAACCCCTGAGATATCTCTTCAGTCTCCCTCCCTGATAAGCTGCCT  391

seq1  TGTATACAATACAATGTTCTGATGCATGACAGAAAAAGATGTTCTTGTAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACAATACAATGTTCTGATGCATGACAGAAAAAGATGTTCTTGTAC  441

seq1  CTTTACTTTATGACAAAATGTTTTTAATTCCTTAGAGAAAATATTGTGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTTATGACAAAATGTTTTTAATTCCTTAGAGAAAATATTGTGCC  491

seq1  CACATGGGAACATAGGGTAGGCTTGGCCTCTTTAGGCTGAACCATAACTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGGAACATAGGGTAGGCTTGGCCTCTTTAGGCTGAACCATAACTC  541

seq1  AATTTTAGCAATTCAAAGGTGGGTGGATCTCCTTTGATGAGGGTACCTAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAGCAATTCAAAGGTGGGTGGATCTCCTTTGATGAGGGTACCTAC  591

seq1  AGCTTTGAACCAGGAAGGATTTACAAACAGGCATCAACTCACCCTCAGAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGAACCAGGAAGGATTTACAAACAGGCATCAACTCACCCTCAGAT  641

seq1  TGAGCAAGAGGGAGGACAGACTGATTTGCAATTTAATTGGCACACCCACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGAGGGAGGACAGACTGATTTGCAATTTAATTGGCACACCCACT  691

seq1  TATTTGGCAAACTCTCTTCCTTCATCTTCCACCTTCAAAAAAACTTGTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGCAAACTCTCTTCCTTCATCTTCCACCTTCAAAAAAACTTGTTT  741

seq1  TTTTTTTTGTGCTAAGTAGACTTATTATAGGAATAATGAATAAAATCAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGTGCTAAGTAGACTTATTATAGGAATAATGAATAAAATCAAA  791

seq1  TGGTCAAATTCTATGTCATCATAACCTAGGAACATAGAAAATGTCTTTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAATTCTATGTCATCATAACCTAGGAACATAGAAAATGTCTTTAC  841

seq1  TTAGGCAGTAACATAAAAGCCATACTAGAGGTACTTGTATTAGCTCAGCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCAGTAACATAAAAGCCATACTAGAGGTACTTGTATTAGCTCAGCT  891

seq1  CATTAAGAGACGCTGAAACAGCAATGGACCAATGTGCTTGTGTTATAGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGAGACGCTGAAACAGCAATGGACCAATGTGCTTGTGTTATAGAG  941

seq1  AAGGCCTTGCCTCTTTAATTGTTAAAGAACATCTACAATGGCTGTATAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTTGCCTCTTTAATTGTTAAAGAACATCTACAATGGCTGTATAGG  991

seq1  GATATTCACATATGGTATTAAGAATGATACTGGAGATAGTAATTCTGCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCACATATGGTATTAAGAATGATACTGGAGATAGTAATTCTGCTG  1041

seq1  TTAGTGTAAAATATTCACTTTACTTACTATGTGCTAGCCACTGTACATAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTAAAATATTCACTTTACTTACTATGTGCTAGCCACTGTACATAT  1091

seq1  GCTATCTCACTGAATTC  1115
      |||||||||||||||||
seq2  GCTATCTCACTGAATTC  1108