MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-045D18
Chromosome	9 (Build37)
Map Location	8,692,416 - 8,835,030
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Mmp7, LOC665057, LOC100039782, Tmem123, Birc2, Birc3, Yap1, EG665090, 9230110C19Rik, AK129341, LOC100039855, 1700018P22Rik, LOC665108, 1700128F08Rik, Trpc6
Downstream gene	Pgr, 9030420J04Rik, Cntn5
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mmp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17393 MGI:103189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665057 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 343 ESTs, 9 Proteins pseudo : _no_value

name	LOC100039782 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039782
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 980 ESTs, 5 Proteins

name	Tmem123 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71929 MGI:1919179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Birc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11797 MGI:1197009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Birc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11796 MGI:1197007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Yap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22601 MGI:103262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665090 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665090 MGI:3647003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	9230110C19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234912 MGI:3045346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AK129341 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234915 MGI:2680221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039855 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	1700018P22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69395 MGI:1916645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC665108 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76669 MGI:1923919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Trpc6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22068 MGI:109523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18667 MGI:97567
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9030420J04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71544 MGI:1918794
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 4 Proteins

name	Cntn5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244682 MGI:3042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	Mmp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227218 GeneID:17393 MGI:103189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 7 transcript_id : NM_010810.3

name	LOC100039782 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259453 GeneID:100039782
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 980 ESTs, 5 Proteins product : similar to ribosomal protein transcript_id : XM_001473311.1

name	Tmem123 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526937 GeneID:71929 MGI:1919179
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 123 transcript_id : NM_133739.1

name	Birc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680697 GeneID:11797 MGI:1197009
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : baculoviral IAP repeat-containing 2 transcript_id : NM_007465.1

name	Birc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803312 GeneID:11796 MGI:1197007
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : baculoviral IAP repeat-containing 3 transcript_id : NM_007464.2

name	Yap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130327 GeneID:22601 MGI:103262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : yes-associated protein 1 transcript_id : NM_009534.2

name	EG665090 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385573 GeneID:665090 MGI:3647003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG665090 transcript_id : XM_974531.1

name	9230110C19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802300 GeneID:234912 MGI:3045346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9230110C19 gene transcript_id : NM_199017.2

name	AK129341 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113866018 GeneID:234915 MGI:2680221
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence AK129341 transcript_id : NM_001045524.1

name	LOC100039855 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259455 GeneID:100039855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100039855 transcript_id : XM_001473651.1

name	1700018P22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259443 GeneID:69395 MGI:1916645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 1700018P22 gene transcript_id : XM_001472999.1

name	Trpc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305596 GeneID:22068 MGI:109523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily C, member 6 transcript_id : NM_013838.1

name	Pgr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112363097 GeneID:18667 MGI:97567
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : progesterone receptor transcript_id : NM_008829.2

name	9030420J04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385576 GeneID:71544 MGI:1918794
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 4 Proteins product : RIKEN cDNA 9030420J04 gene transcript_id : XM_146632.7

name	Cntn5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259445 GeneID:244682 MGI:3042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : contactin 5 transcript_id : XM_974864.2

name	Mmp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111955033 GeneID:17393 MGI:103189
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004235 - matrilysin activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : matrilysin, uterine; matrix metalloproteinase 7 product : matrix metallopeptidase 7 protein_id : NP_034940.2

name	LOC100039782 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259454 GeneID:100039782
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_001473361.1

name	Tmem123 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526938 CCDS:CCDS22810.1 GeneID:71929 MGI:1919179
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : pro-oncosis receptor inducing membrane injury protein_id : NP_598500.1

name	Birc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680698 CCDS:CCDS22811.1 GeneID:11797 MGI:1197009
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : apoptosis inhibitor 2; baculoviral IAP repeat-containing 3 product : baculoviral IAP repeat-containing 2 protein_id : NP_031491.1

name	Birc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680696 CCDS:CCDS22812.1 GeneID:11796 MGI:1197007
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : apoptosis inhibitor 1; baculoviral IAP repeat-containing 2 product : baculoviral IAP repeat-containing 3 protein_id : NP_031490.1

name	Yap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678615 GeneID:22601 MGI:103262
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IGI] GO_function : GO:0016563 - transcriptional activator activity [Evidence IGI] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] codon_start : 1 note : yes-associated protein, 65 kDa; yes-associated protein 1, 65kDa product : yes-associated protein 1 protein_id : NP_033560.1

name	EG665090 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94385574 GeneID:665090 MGI:3647003
definition	codon_start : 1 product : hypothetical protein protein_id : XP_979625.1

name	9230110C19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39841033 CCDS:CCDS22813.1 GeneID:234912 MGI:3045346
definition	codon_start : 1 product : hypothetical protein LOC234912 protein_id : NP_950182.1

name	AK129341 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113866019 GeneID:234915 MGI:2680221
definition	codon_start : 1 product : hypothetical protein LOC234915 protein_id : NP_001038989.1

name	LOC100039855 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259456 GeneID:100039855
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473701.1

name	1700018P22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259444 GeneID:69395 MGI:1916645
definition	codon_start : 1 product : hypothetical protein LOC69395 protein_id : XP_001473049.1

name	Trpc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305597 CCDS:CCDS22815.1 GeneID:22068 MGI:109523
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0015279 - store-operated calcium channel activity [Evidence IDA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : transient receptor protein 6 product : transient receptor potential cation channel, subfamily C, member 6 protein_id : NP_038866.1

name	Pgr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112363098 CCDS:CCDS22816.1 GeneID:18667 MGI:97567
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IMP]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IMP]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030879 - mammary gland development [Evidence IMP]; GO:0001542 - ovulation (sensu Mammalia) [Evidence IMP]; GO:0050847 - progesterone receptor signaling pathway [Evidence IDA]; GO:0050678 - regulation of epithelial cell proliferation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : progesterone receptor protein_id : NP_032855.2

name	9030420J04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94385577 GeneID:71544 MGI:1918794
definition	codon_start : 1 product : hypothetical protein LOC71544 protein_id : XP_146632.7

name	Cntn5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259446 GeneID:244682 MGI:3042287
definition	codon_start : 1 product : contactin 5 protein_id : XP_979958.2

name	LOC665108 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665108
definition	number : 1 pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:76669
definition	number : 1 pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:76669
definition	number : 2 pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:76669
definition	number : 3 pseudo : _no_value

name	LOC665057 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259452 GeneID:665057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 343 ESTs, 9 Proteins product : similar to Chromobox homolog 3 (HP1 gamma homolog, Drosophila) pseudo : _no_value transcript_id : XR_031139.1

clone name	MSMg01-417G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-465B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117N22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-393L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133F09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-045D18.b	B6Ng01-045D18.g
ACC	DH870750	DH870751
length	1,129	291
definition	DH870750\|Mus musculus domesticus DNA, BAC clone: B6Ng01-045D18, 5' end.	DH870751\|Mus musculus domesticus DNA, BAC clone: B6Ng01-045D18, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(8,692,416 - 8,693,573)	(8,834,742 - 8,835,030)
sequence	gaattcatggcttcttcagttattccatttacaatcatgacagtaactaa gatgattcataccctactagaattctgaaacatacagccctttaaaacac tgtaatacatcaggagaagcccctacatgtgtgttttctggtgtggggaa gagttggttttacatgtcaaaaagacttccagttgggtaaggtgcttgtt tgagaagactctgcttcaactccacacagtcacttgtattgctttgggta atgacatcagaccatgctctattgtcagcatgttgctttcatttgcttgg gcactctgcattttctcttagttttagtggggttataactcagattagta ggattaaaacatcacagcacgtctctggcctgagagatgcagggaagtat tggatagcctcagtgaacccaagaatgaagcacatactttatgcaatgta ccaagaagcaccctttgaagggcttgtggtctaaattcatattctcatgg ccataaaaactaactaactaactaactaactaactaactaaccacaactt gcataagcttgagacccggagctatttagcagacactatcagagatctaa gtacattttagtagatgcaaggatgtttaatgaatggttgtgtttaatga atgaatgttctggtgccacttccaacctcagtagggctggcagccttcat gcaggaggagaacaaaaggacaatttctaggcagagaaagacttcaaggg gaccaagtcaggatatgctggccaaatattttggcagtggcatctcagta actctcttcaggcttcctgggcaccaagacttcatgaggggcatggggct ccaatactcgggcaactatctctgtctttttgcacaaacctggccagatg agggtctgtttcctttataatgtggttgtggccagaccacattgttttct atctagactgggagtacaagtgacacgttcagcagctttgtgacaagccc tggagatcaaacaggattgtgaagctactgttgctgtgggtcctagaaat gatgaaagataaaaagactgaaaaaaccgggtgctatggatctggaactc tcgaattcctgaaccctgccaggtcaggg	ctaagatatattattttgttctttcaaaaactattattggcccccagaag cctgtttggtttctaatgcgtgatggaaaatgagtagacccagatgggag gggaggttgggaggaattaggggactagaggaacaaaacccattaacaag atgtactgtacggaaaaaatttagtttcaatgcaaggaaaaactattttt ttaatatttttttctaaattattcataatagcatgggtatttttactagg gttcttgacttattgtttatgttattagatttaataaaatt
quality values	Open. Hide. 57 42 25 30 61 33 27 43 61 61 61 61 61 61 61 61 43 30 61 61 61 61 47 61 61 47 38 39 43 30 27 41 23 32 41 40 55 61 59 61 61 59 61 61 61 61 61 61 61 61 49 61 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 53 61 53 61 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 52 61 61 61 52 61 61 61 61 61 61 61 53 61 47 61 43 61 45 61 61 61 61 61 61 50 61 38 61 53 61 61 61 61 61 39 53 28 47 47 46 53 57 27 57 53 43 47 57 47 40 43 53 53 42 57 45 45 53 57 50 53 47 43 28 57 35 53 45 50 52 45 57 32 50 42 52 35 47 50 57 32 43 32 50 53 34 52 40 39 45 31 53 37 57 33 33 52 42 57 53 45 53 38 52 52 46 38 57 53 24 52 52 39 52 39 57 50 45 43 50 53 52 47 19 47 41 45 37 38 13 30 50 32 57 34 31 38 31 52 27 41 40 50 35 53 30 28 29 33 50 38 38 30 32 48 50 57 33 23 42 31 26 30 40 35 39 47 30 38 29 28 42 50 37 23 15 28 50 15 53 40 28 53 38 24 23 44 57 57 35 40 33 21 25 24 19 57 40 39 25 31 18 57 32 25 31 52 24 52 53 34 25 24 14 28 37 27 31 33 25 57 57 34 40 18 23 18 30 32 33 25 31 20 35 27 34 33 37 29 30 41 29 20 17 21 31 27 32 32 30 27 51 51 33 44 11 21 23 30 27 31 32 28 17 30 28 29 29 27 21 25 19 9 11 9 18 31 34 23 20 30 18 33 18 12 23 20 13 14 24 32 47 12 16 14 16 20 31 28 23 35 20 33 29 28 20 29 29 41 31 43 51 29 29 33 33 35 51 39 39 21 29 19 25 12 22 13 28 28 29 28 20 43 46 24 27 34 21 29 27 35 23 41 24 31 28 17 13 26 24 8 7 5 11 15 29 28 27 41 20 13 26 29 18 12 7 13 25 26 19 17 23 31 20 51 16 23 7 7 16 18 41 26 28 28 28 46 29 22 21 8 6 7 17 24 18 30 6 25 24 44 11 24 13 31 14 12 21 12 29 22 22 21 29 20 32 19 38 38 27 27 17 25 23 28 20 31 23 19 27 24 27 51 20 27 13 10 5 7 5 10 9 19 20 7 7 6 7 7 6 15 17 6 5 8 25 35 9 15 23 7 7 8 12 14 11 12 19 28 7 25 14 23 15 16 18 6 11 14 15 5 7 10 13 13 16 10 25 5 5 14 6 8 31 23 14 24 18 29 20 17 14 13 23 19 15 8 7 8 17 12 12 4 11 8 6 3 5 17 33 23 12 16 14 10 30 5 8 11 4 6 4 4 8 10 14 22 4 4 9 10 11 4 7 18 22 27 11 4 3 4 11 11 11 11 7 9 7 10 15 16 14 7 23 17 14 21 7 24 5 3 3 8 5 4 7 7 5 5 16 26 7 9 20 15 9 19 11 8 3 3 17 10 14 9 5 7 3 17 30 13	Open. Hide. 39 28 24 28 16 36 27 22 36 39 38 59 61 61 61 61 61 59 55 59 61 61 59 59 44 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 44 55 59 36 44 44 59 61 61 59 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 55 55 59 59 59 61 61 61 61 61 61 61 61 61 61 49 44 43 44 44 55 59 59 59 39 36 43 39 52 52 36 36 12 22 27 18 37 36 36 23 36 23 30 27 29 13 26 36 39 38 52 49 23 43 43 59 13 21 12 10 8 13 13 17 39 44 35 28 18 22 11 13 23 17 10 25 9 23 27 35 32 25 29 29 44 32 45 43 43 30 32 39 36 36 22 24 22 38 19 23 30 30 38 39 45 30 44 22 37 29 41 43 28 24 25 33 32 23 36 29 27 36 37 25 24 39 28 14 10 25 8 19 52 37 33 24 43 44 27 32 19 23 27 22 32 22 13 23 24 8 19 15 19 32 35 33 15 22 18 18 28 16 36 29 25 39 30 29 32 31 27 11 18 10 9 13 32 14 28 12 15 22 9 15 19 27 11 17 22

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_8692416_8693573
seq2: B6Ng01-045D18.b_42_1170

seq1  GAATTCATGGCTTCTTCAGTTATTCCATTTACAATCATGACAGTAACTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGCTTCTTCAGTTATTCCATTTACAATCATGACAGTAACTAA  50

seq1  GATGATTCATACCCTACTAGAATTCTGAAACATACAGCCCTTTAAAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTCATACCCTACTAGAATTCTGAAACATACAGCCCTTTAAAACAC  100

seq1  TGTAATACATCAGGAGAAGCCCCTACATGTGTGTTTTCTGGTGTGGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATACATCAGGAGAAGCCCCTACATGTGTGTTTTCTGGTGTGGGGAA  150

seq1  GAGTTGGTTTTACATGTCAAAAAGACTTCCAGTTGGGTAAGGTGCTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGTTTTACATGTCAAAAAGACTTCCAGTTGGGTAAGGTGCTTGTT  200

seq1  TGAGAAGACTCTGCTTCAACTCCACACAGTCACTTGTATTGCTTTGGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGACTCTGCTTCAACTCCACACAGTCACTTGTATTGCTTTGGGTA  250

seq1  ATGACATCAGACCATGCTCTATTGTCAGCATGTTGCTTTCATTTGCTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATCAGACCATGCTCTATTGTCAGCATGTTGCTTTCATTTGCTTGG  300

seq1  GCACTCTGCATTTTCTCTTAGTTTTAGTGGGGTTATAACTCAGATTAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTGCATTTTCTCTTAGTTTTAGTGGGGTTATAACTCAGATTAGTA  350

seq1  GGATTAAAACATCACAGCACGTCTCTGGCCTGAGAGATGCAGGGAAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAACATCACAGCACGTCTCTGGCCTGAGAGATGCAGGGAAGTAT  400

seq1  TGGATAGCCTCAGTGAACCCAAGAATGAAGCACATACTTTATGCAATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGCCTCAGTGAACCCAAGAATGAAGCACATACTTTATGCAATGTA  450

seq1  CCAAGAAGCACCCTTTGAAGGGCTTGTGGTCTAAATTCATATTCTCATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGCACCCTTTGAAGGGCTTGTGGTCTAAATTCATATTCTCATGG  500

seq1  CCATAAAAACTAACTAACTAACTAACTAACTAACTAACTAACCACAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAAACTAACTAACTAACTAACTAACTAACTAACTAACCACAACTT  550

seq1  GCATAAGCTTGAGACCCGGAGCTATTTAGCAGACACTATCAGAGATCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAGCTTGAGACCCGGAGCTATTTAGCAGACACTATCAGAGATCTAA  600

seq1  GTACATTTTAGTAGATGCAAGGATGTTTAATGAATGGTTGTGTTTAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTTAGTAGATGCAAGGATGTTTAATGAATGGTTGTGTTTAATGA  650

seq1  ATGAATGTTCTGGTGCCACTTCCAACCTCAGTAGGGCTGGCAGCCTTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTTCTGGTGCCACTTCCAACCTCAGTAGGGCTGGCAGCCTTCAT  700

seq1  GCAGGAGGAGAACAAAAGGACAATTTCTAGGCAGAGAAAGACTTCAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCAGGAGGAGAACAAAAGGACAATTTCTAGGCAGAGAAAGACTTC-AAGG  749

seq1  GGACCAAGTCAGGATATGCTGGCCAAATATTTTGGCAGTGGCATCTCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAGTCAGGATATGCTGGCCAAATATTTTGGCAGTGGCATCTCAGT  799

seq1  AACTCTCTTCAGGCTTCCTGGGCACCAAGACTTCATGAGGGGCATGGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCTTCAGGCTTCCTGGGCACCAAGACTTCATGAGGGGCATGGGGC  849

seq1  TCCAATACTCGGGCAACTATCTCTGTCTTTCTGCACAAACCTGGCCAGAT  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCCAATACTCGGGCAACTATCTCTGTCTTTTTGCACAAACCTGGCCAGAT  899

seq1  GAGGGTTCTGTTTCCTTTAT-ATGTGGTTGTTGGCCAGACCACATTGTTT  949
      ||||| |||||||||||||| ||||||||| |||||||||||||||||||
seq2  GAGGG-TCTGTTTCCTTTATAATGTGGTTG-TGGCCAGACCACATTGTTT  947

seq1  TCTATCTAGACTGGGAGGTCACAGTGACACAGTTCAGGCAGGCTTGTGAC  999
      |||||||||||||||||  || |||||||| ||||| ||||  |||||||
seq2  TCTATCTAGACTGGGAGTACA-AGTGACAC-GTTCA-GCAGCTTTGTGAC  994

seq1  AAGGCCCTGGAGGATCAGACAGGAAGTGGTGAAGCCTACTGTTGCTGTGG  1049
      || |||||||| ||||| ||||||  | |||||| |||||||||||||||
seq2  AA-GCCCTGGA-GATCAAACAGGA--TTGTGAAG-CTACTGTTGCTGTGG  1039

seq1  GGCCCTAGAGAAATGGATGGAGAGATAGAGAAAGACTGGAAGAAAAACCC  1099
      | ||    |||||| ||| || ||||  | |||||||    |||||| ||
seq2  GTCC---TAGAAAT-GAT-GAAAGAT--AAAAAGACT----GAAAAAACC  1078

seq1  GGGTGCTATTGGGAATCTGGGAAACTGCTGAAATATCCCTGAACCCTGCC  1149
      |||||||||   | ||||||  ||||   ||   || |||||||||||||
seq2  GGGTGCTAT---GGATCTGG--AACTCTCGA---ATTCCTGAACCCTGCC  1120

seq1  AGGTCAGGG  1158
      |||||||||
seq2  AGGTCAGGG  1129

seq1: chr9_8834742_8835030
seq2: B6Ng01-045D18.g_73_363 (reverse)

seq1  AATTTTATTAAATCTTATAACATAAACAATAAGTC-AGAGCCCTAGTAAA  49
      ||||||||||||||| ||||||||||||||||||| ||| ||||||||||
seq2  AATTTTATTAAATCTAATAACATAAACAATAAGTCAAGAACCCTAGTAAA  50

seq1  AATACCCATGTTATTATGAATAATTTAGAAAAAAATATT-AAAAAATAGT  98
      |||||||||| |||||||||||||||||||||||||||| ||||||||||
seq2  AATACCCATGCTATTATGAATAATTTAGAAAAAAATATTAAAAAAATAGT  100

seq1  TTTTCCTTGCATTGAAACTAAATTTTTTTCGTACAGTACATCTTGTTAAT  148
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTCCTTGCATTGAAACTAAATTTTTTCCGTACAGTACATCTTGTTAAT  150

seq1  GGGTTTTGTTCCTCTAGTCCCCTAATTCCTCCCAACCTCCCCTCCCATCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTGTTCCTCTAGTCCCCTAATTCCTCCCAACCTCCCCTCCCATCT  200

seq1  GGGTCTACTCATTTTCCATCACGCATTAGAAACCAAACAGGCTTCTGGGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTACTCATTTTCCATCACGCATTAGAAACCAAACAGGCTTCTGGGG  250

seq1  GCCAATAATAGTTTTTGAAAGAACAAAATAATATATCTTAG  289
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATAATAGTTTTTGAAAGAACAAAATAATATATCTTAG  291

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BAC

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Alignment Information