BAC Information

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BAC

Clone NameB6Ng01-045H08
Chromosome9 (Build37)
Map Location 37,404,787 - 37,405,382
singlet/doubletsinglet
Overlap genenone
Upstream geneA630095E13Rik, Acrv1, Chek1, Stt3a, Ei24, LOC627681, Fez1, Pknox2, LOC100042545, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn
Downstream geneSpa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045H08.bB6Ng01-045H08.g
ACCDH870909DH870910
length5251,199
definitionDH870909|Mus musculus domesticus DNA, BAC clone: B6Ng01-045H08, 5' end.DH870910|Mus musculus domesticus DNA, BAC clone: B6Ng01-045H08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcagctacttcttcagcaccatgtctggctgcatgccactgcacttccca
ccatgatgacaatggactaagtctctgaatctctaagccaaacctaatta
aatgctttataagagttgccacggttgtggtgtcccttcaccctagctaa
gacacacacacaaaagtgtgctctgtagaaaaaaaagtttgatgtttgtc
aaaatgaatttttcaataaatattactttcagtgtataaagaaaaggagt
tatcgttatggtcatggagcaatccttttttataaataaaaccaagaata
ccctggagggtcttgttcttctgtagtgttttatagagcttcatcagtta
gtgtgtctctgactcagaaatgaatcagggtaagttctaaactgttgcta
ccgttctgcttctgttcatattgtagcatgcactgtttgtcttaaaggaa
actgaataaggatcgcctacttctccaggtcaatttctatcaagtcaatt
taaatagtaactttttttaaagttt
gaattctcataatgattccctgaactgtaaagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggaattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtagttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtggtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgtggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtatc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaactactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaggt
gaaagataagttattgcacctggcccctcctacaaccaagaaagaagcac
aacgtttagtgggtctatttggattctggagacacacatccctcacttgg
gtgtgttacttaggcctatttaccaagtgactcggaaagctgctagcttt
gtgtgggcctgacagagagcccttcacagtccagctgctgtgcagctgct
ctaccacttggaccatatgaccagcagacccgatgtactgaggtgtctgt
gctgaagagatgctgttgaagcctctgcagccctgtagtatccagaaaga
ccttgggattggacaagctctacatcactgcaacaactatccccttgaaa
cgctctgctcatatggctatgaactgactgcatgacatatctgggacgac
tccactggaagctgttccaattcagaaacccatcgccgtacgtcatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37404787_37405382
seq2: B6Ng01-045H08.b_44_639 (reverse)

seq1  CATATTCTACCCAACCCCCTCCACCGCCGCAAAAAAAGAGAATAATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTACCCAACCCCCTCCACCGCCGCAAAAAAAGAGAATAATTTCA  50

seq1  TGGAGAAAAAAATCAAAACTTTAAAAAAAGTTACTATTTAAATTGACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAAAAATCAAAACTTTAAAAAAAGTTACTATTTAAATTGACTTG  100

seq1  ATAGAAATTGACCTGGAGAAGTAGGCGATCCTTATTCAGTTTCCTTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATTGACCTGGAGAAGTAGGCGATCCTTATTCAGTTTCCTTTAAG  150

seq1  ACAAACAGTGCATGCTACAATATGAACAGAAGCAGAACGGTAGCAACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAGTGCATGCTACAATATGAACAGAAGCAGAACGGTAGCAACAGT  200

seq1  TTAGAACTTACCCTGATTCATTTCTGAGTCAGAGACACACTAACTGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACTTACCCTGATTCATTTCTGAGTCAGAGACACACTAACTGATGA  250

seq1  AGCTCTATAAAACACTACAGAAGAACAAGACCCTCCAGGGTATTCTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTATAAAACACTACAGAAGAACAAGACCCTCCAGGGTATTCTTGGT  300

seq1  TTTATTTATAAAAAAGGATTGCTCCATGACCATAACGATAACTCCTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATAAAAAAGGATTGCTCCATGACCATAACGATAACTCCTTTTC  350

seq1  TTTATACACTGAAAGTAATATTTATTGAAAAATTCATTTTGACAAACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACACTGAAAGTAATATTTATTGAAAAATTCATTTTGACAAACATC  400

seq1  AAACTTTTTTTTCTACAGAGCACACTTTTGTGTGTGTGTCTTAGCTAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTTTTTCTACAGAGCACACTTTTGTGTGTGTGTCTTAGCTAGGG  450

seq1  TGAAGGGACACCACAACCGTGGCAACTCTTATAAAGCATTTAATTAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGACACCACAACCGTGGCAACTCTTATAAAGCATTTAATTAGGTT  500

seq1  TGGCTTAGAGATTCAGAGACTTAGTCCATTGTCATCATGGTGGGAAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGAGATTCAGAGACTTAGTCCATTGTCATCATGGTGGGAAGTGC  550

seq1  AGTGGCATGCAGCCAGACATGGTGCTGAAGAAGTAGCTGAGAATTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCATGCAGCCAGACATGGTGCTGAAGAAGTAGCTGAGAATTC  596