BAC Information

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BAC

Clone NameB6Ng01-047F10
Chromosome9 (Build37)
Map Location 112,822,151 - 112,929,178
singlet/doubletdoublet
Overlap geneLOC100039391
Upstream geneArpp21, LOC100039341, LOC620760, LOC100043800, EG622110
Downstream geneLOC100043801, LOC100043802, LOC636680, Pdcd6ip, Clasp2, Ubp1, Fbxl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047F10.bB6Ng01-047F10.g
ACCDH872231DH872232
length801715
definitionDH872231|Mus musculus domesticus DNA, BAC clone: B6Ng01-047F10, 5' end.DH872232|Mus musculus domesticus DNA, BAC clone: B6Ng01-047F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,928,386 - 112,929,178)(112,822,151 - 112,822,703)
sequence
gaattccacttctcttcttgcaaagcaagtgtgctaaccactgggcaact
cttgttgcccacagctgggtaaaattatgtacataggttacgaaaggaaa
tacctttaatcagtgggaggagagaaattttatttttctccctttgattg
tttttggaatgttttccatcgaacatcttttacttagtaggaaaattcac
tgaaccaaacagcctggagtcttcagtgtccctgtgaccagggtcatctg
atgcttttcttttttagtgccggcttcctgcaggaaacacagggactgtt
ttagatggacagctttattctcctctgaagggtccctggtggtatctgtt
ctcacagagagaaagtttaaaggtttatttcagaaaagactcttgtcatc
tatccagttgggcacttaaattgattcttggctttatttccaggacggag
cagacattttcctccgagatttcctccgtttatgctcagaagctgctggt
atgagcagatggtcccagggatgcaggcagtaatttgctgccctaaactg
atcctcacggagtggcgcccactgttgcattcactgcctgttttcaagct
gaccatgatccctcccacacatccatgacccccccccccggcccaaccct
ggtcttccctaaacatttcttgtactttaaattatatgggcctaagaagg
aattttctgtgcatatcctcatagaagataattgttcagctttactaagg
aacaacatttcaaagtcaaaaattcattctgattcttcttcgtggtggct
a
gaattctatacccagaacctgtatgaaaaaaaaaaagccaggaatgttga
tgcacttgaaatctcagggtgaagaaaaaaagaaaaaagaagtaagagga
tccctggagctcggtggtcaggcaatctagccagatgttgagttcctgga
cactaagagtctatctgttacacaactccagctgtcagtctttgtattaa
tttccccatctattgcaaggaaaagcttctctgatgtgggttgtacaagg
cactaatctataagtaaagtgatatgtcatttaatagggtatctttatca
aactcctctcctcaaggctctaggatctatgcagaagaggaggcaggaag
atgctaagaaggatgatggatgaaaagagtgtgtttgagaagtgggatgc
acatatgaacacacagagactgtagtaacatgcacaagacctgcacactt
tccagctaggtggggtcctagtactgagaggggggcatggatccaagatc
gcagccctaactctgtgcaattaatagccacaagtaaagggagaatcagt
tttctccaaggctctataactgggtatatcaaccacactccagacaggtc
tcgtgcccaggaaccttggtcaagtcaagacaaacacagtggtatttttg
tggactttttgattttcttttttgttttgtttttgtttttgctgatttgg
gggagaaggagaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_112928386_112929178
seq2: B6Ng01-047F10.b_47_833 (reverse)

seq1  AAGAATACAAGAATAGAATTTTCTGACTTTGAAATGTTTGTTCCTTTTAG  50
      ||||||   ||||| ||||||| ||||||||||||| |||||||  ||||
seq2  AAGAAT--CAGAAT-GAATTTT-TGACTTTGAAATG-TTGTTCC--TTAG  43

seq1  TAAAAGCTGAAC-ATTATC-TCTATGA-GATATGCACAG-ATATTCTGTC  96
      | |||||||||| |||||| ||||||| ||||||||||| | ||||  ||
seq2  T-AAAGCTGAACAATTATCTTCTATGAGGATATGCACAGAAAATTCCTTC  92

seq1  TTAGGCCCATATAATTTAAAGTACAGGAAATGTTTAGGGAAGACCAGGGT  146
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTAGGCCCATATAATTTAAAGTACAAGAAATGTTTAGGGAAGACCAGGGT  142

seq1  TGGGCCGGGGGGGGGGGGTCATGGATGTGTGGGAGGGATCATGGTCAGCT  196
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCC-GGGGGGGGGGGTCATGGATGTGTGGGAGGGATCATGGTCAGCT  191

seq1  TGAAAAACAGGCAGTGAATGCAACAGTGGGCGCCACTCCGTGAGGATCAG  246
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-AAAACAGGCAGTGAATGCAACAGTGGGCGCCACTCCGTGAGGATCAG  240

seq1  TTTAGGGCAGCAAATTACTGCCTGCATCCCTGGGACCATCTGCTCATACC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGCAGCAAATTACTGCCTGCATCCCTGGGACCATCTGCTCATACC  290

seq1  AGCAGCTTCTGAGCATAAACGGAGGAAATCTCGGAGGAAAATGTCTGCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTTCTGAGCATAAACGGAGGAAATCTCGGAGGAAAATGTCTGCTC  340

seq1  CGTCCTGGAAATAAAGCCAAGAATCAATTTAAGTGCCCAACTGGATAGAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCTGGAAATAAAGCCAAGAATCAATTTAAGTGCCCAACTGGATAGAT  390

seq1  GACAAGAGTCTTTTCTGAAATAAACCTTTAAACTTTCTCTCTGTGAGAAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAGTCTTTTCTGAAATAAACCTTTAAACTTTCTCTCTGTGAGAAC  440

seq1  AGATACCACCAGGGACCCTTCAGAGGAGAATAAAGCTGTCCATCTAAAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCACCAGGGACCCTTCAGAGGAGAATAAAGCTGTCCATCTAAAAC  490

seq1  AGTCCCTGTGTTTCCTGCAGGAAGCCGGCACTAAAAAAGAAAAGCATCAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTGTGTTTCCTGCAGGAAGCCGGCACTAAAAAAGAAAAGCATCAG  540

seq1  ATGACCCTGGTCACAGGGACACTGAAGACTCCAGGCTGTTTGGTTCAGTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCTGGTCACAGGGACACTGAAGACTCCAGGCTGTTTGGTTCAGTG  590

seq1  AATTTTCCTACTAAGTAAAAGATGTTCGATGGAAAACATTCCAAAAACAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCTACTAAGTAAAAGATGTTCGATGGAAAACATTCCAAAAACAA  640

seq1  TCAAAGGGAGAAAAATAAAATTTCTCTCCTCCCACTGATTAAAGGTATTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGGAGAAAAATAAAATTTCTCTCCTCCCACTGATTAAAGGTATTT  690

seq1  CCTTTCGTAACCTATGTACATAATTTTACCCAGCTGTGGGCAACAAGAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCGTAACCTATGTACATAATTTTACCCAGCTGTGGGCAACAAGAGT  740

seq1  TGCCCAGTGGTTAGCACACTTGCTTTGCAAGAAGAGAAGTGGAATTC  793
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGTGGTTAGCACACTTGCTTTGCAAGAAGAGAAGTGGAATTC  787

seq1: chr9_112822151_112822703
seq2: B6Ng01-047F10.g_230_782

seq1  ATCTGTTACACAACTCCAGCTGTCAGTCTTTGTATTAATTTCCCCATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTACACAACTCCAGCTGTCAGTCTTTGTATTAATTTCCCCATCTA  50

seq1  TTGCAAGGAAAAGCTTCTCTGATGTGGGTTGTACAAGGCACTAATCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGGAAAAGCTTCTCTGATGTGGGTTGTACAAGGCACTAATCTATA  100

seq1  AGTAAAGTGATATGTCATTTAATAGGGTATCTTTATCAAACTCCTCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGTGATATGTCATTTAATAGGGTATCTTTATCAAACTCCTCTCCT  150

seq1  CAAGGCTCTAGGATCTATGCAGAAGAGGAGGCAGGAAGATGCTAAGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTCTAGGATCTATGCAGAAGAGGAGGCAGGAAGATGCTAAGAAGG  200

seq1  ATGATGGATGAAAAGAGTGTGTTTGAGAAGTGGGATGCACATATGAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGATGAAAAGAGTGTGTTTGAGAAGTGGGATGCACATATGAACAC  250

seq1  ACAGAGACTGTAGTAACATGCACAAGACCTGCACACTTTCCAGCTAGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACTGTAGTAACATGCACAAGACCTGCACACTTTCCAGCTAGGTG  300

seq1  GGGTCCTAGTACTGAGAGGGGGGCATGGATCCAAGATCGCAGCCCTAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTAGTACTGAGAGGGGGGCATGGATCCAAGATCGCAGCCCTAACT  350

seq1  CTGTGCAATTAATAGCCACAAGTAAAGGGAGAATCAGTTTTCTCCAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAATTAATAGCCACAAGTAAAGGGAGAATCAGTTTTCTCCAAGGC  400

seq1  TCTATAACTGGGTATATCAACCACACTCCAGACAGGTCTCGTGCCCAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAACTGGGTATATCAACCACACTCCAGACAGGTCTCGTGCCCAGGA  450

seq1  ACCTTGGTCAAGTCAAGACAAACACAGTGGTATTTTTGTGGACTTTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGTCAAGTCAAGACAAACACAGTGGTATTTTTGTGGACTTTTTGA  500

seq1  TTTTCTTTTTTGTTTTGTTTTTGTTTTTGCTGATTTGGGGGAGAAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTTGTTTTGTTTTTGTTTTTGCTGATTTGGGGGAGAAGGAGA  550

seq1  GGG  553
      |||
seq2  GGG  553