MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-054J19
Chromosome	9 (Build37)
Map Location	76,145,260 - 76,146,249
singlet/doublet	singlet
Overlap gene	Hcrtr2
Upstream gene	Myo5c, Gnb5, Bcl2l10, LOC384954, Mapk6, Leo1, EG666190, LOC100042070, Tmod3, Tmod2, Lysmd2, Scg3, LOC100042107, Bmp5, EG620071, Hmgcll1, Gfral
Downstream gene	C530008M07Rik, Tinag, LOC436082, 2310046A06Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Myo5c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208943 MGI:2442485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14697 MGI:101848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Bcl2l10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12049 MGI:1330841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC384954 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 49 Proteins pseudo : _no_value

name	Mapk6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50772 MGI:1354946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Leo1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235497 MGI:2685031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666190 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666190 MGI:3647337
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	LOC100042070 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tmod3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50875 MGI:1355315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50876 MGI:1355335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Lysmd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70082 MGI:1917332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scg3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20255 MGI:103032
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042107 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 282 ESTs, 17 Proteins pseudo : _no_value

name	Bmp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12160 MGI:88181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG620071 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620071 MGI:3647285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Hmgcll1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208982 MGI:2446108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gfral (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404194 MGI:3607786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hcrtr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:387285 MGI:2680765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C530008M07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208994 MGI:2685362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tinag (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26944 MGI:1349477
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC436082 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:436082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins pseudo : _no_value

name	2310046A06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69642 MGI:1916892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs, 3 Proteins

name	Myo5c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486758 GeneID:208943 MGI:2442485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin VC transcript_id : NM_001081322.1

name	Gnb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754017 GeneID:14697 MGI:101848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein, beta 5 transcript_id : NM_010313.1

name	Gnb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353269 GeneID:14697 MGI:101848
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein, beta 5 transcript_id : NM_138719.2

name	Bcl2l10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7304926 GeneID:12049 MGI:1330841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bcl2-like 10 transcript_id : NM_013479.1

name	Mapk6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76573878 GeneID:50772 MGI:1354946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase 6 transcript_id : NM_015806.4

name	Mapk6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76573875 GeneID:50772 MGI:1354946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase 6 transcript_id : NM_027418.1

name	Leo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299618 GeneID:235497 MGI:2685031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) transcript_id : NM_001039522.1

name	EG666190 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260031 GeneID:666190 MGI:3647337
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG666190 transcript_id : XM_001475415.1

name	LOC100042070 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260077 GeneID:100042070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042070 transcript_id : XM_001478508.1

name	Tmod3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84697033 GeneID:50875 MGI:1355315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tropomodulin 3 transcript_id : NM_016963.2

name	Tmod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84697032 GeneID:50876 MGI:1355335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tropomodulin 2 transcript_id : NM_016711.3

name	Tmod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84697030 GeneID:50876 MGI:1355335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tropomodulin 2 transcript_id : NM_001038710.1

name	Lysmd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130490960 GeneID:70082 MGI:1917332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LysM, putative peptidoglycan-binding, domain containing 2 transcript_id : NM_027309.2

name	Scg3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375169 GeneID:20255 MGI:103032
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secretogranin III transcript_id : NM_009130.2

name	Bmp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374687 GeneID:12160 MGI:88181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone morphogenetic protein 5 transcript_id : NM_007555.3

name	EG620071 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82931764 GeneID:620071 MGI:3647285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG620071 transcript_id : XM_884461.1

name	Hmgcll1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130046 GeneID:208982 MGI:2446108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 transcript_id : NM_173731.2

name	Gfral (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112821668 GeneID:404194 MGI:3607786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GDNF family receptor alpha like transcript_id : NM_205844.3

name	Hcrtr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357036 GeneID:387285 MGI:2680765
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypocretin (orexin) receptor 2 transcript_id : NM_198962.2

name	C530008M07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113931643 GeneID:208994 MGI:2685362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C530008M07 gene transcript_id : NM_001045518.1

name	Tinag (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981313 GeneID:26944 MGI:1349477
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulointerstitial nephritis antigen transcript_id : NM_012033.2

name	2310046A06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260082 GeneID:69642 MGI:1916892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 2 Proteins product : RIKEN cDNA 2310046A06 gene transcript_id : XM_001478691.1

name	2310046A06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260080 GeneID:69642 MGI:1916892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 1 Protein product : RIKEN cDNA 2310046A06 gene transcript_id : XM_001478683.1

name	Myo5c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486759 GeneID:208943 MGI:2442485
definition	GO_component : GO:0016459 - myosin [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA] codon_start : 1 product : myosin VC protein_id : NP_001074791.1

name	Gnb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754018 GeneID:14697 MGI:101848
definition	GO_function : GO:0005083 - small GTPase regulator activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; hug; flail; flailer product : guanine nucleotide-binding protein, beta-5 subunit isoform 1 protein_id : NP_034443.1

name	Gnb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281679 GeneID:14697 MGI:101848
definition	GO_function : GO:0005083 - small GTPase regulator activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; hug; flail; flailer product : guanine nucleotide-binding protein, beta-5 subunit isoform 2 protein_id : NP_619733.1

name	Bcl2l10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304927 CCDS:CCDS23341.1 GeneID:12049 MGI:1330841
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA] [Evidence ISS]; GO:0006915 - apoptosis [Evidence IDA]; GO:0008625 - induction of apoptosis via death domain receptors [Evidence ISS]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 product : Bcl2-like 10 protein_id : NP_038507.1

name	Mapk6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76573879 CCDS:CCDS23342.1 GeneID:50772 MGI:1354946
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : protein kinase, mitogen activated kinase 4; mitogen activated protein kinase 4; Erk-3 related product : mitogen-activated protein kinase 6 protein_id : NP_056621.4

name	Mapk6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76573876 CCDS:CCDS23342.1 GeneID:50772 MGI:1354946
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : protein kinase, mitogen activated kinase 4; mitogen activated protein kinase 4; Erk-3 related product : mitogen-activated protein kinase 6 protein_id : NP_081694.1

name	Leo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87299619 CCDS:CCDS23343.1 GeneID:235497 MGI:2685031
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : Leo1, Paf1/RNA polymerase II complex component, homolog protein_id : NP_001034611.1

name	EG666190 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260032 GeneID:666190 MGI:3647337
definition	codon_start : 1 product : similar to Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) protein_id : XP_001475465.1

name	LOC100042070 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260078 GeneID:100042070
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478558.1

name	Tmod3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394460 CCDS:CCDS23344.1 GeneID:50875 MGI:1355315
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0031941 - filamentous actin [Evidence ISS]; GO:0030027 - lamellipodium [Evidence ISS]; GO:0001726 - ruffle [Evidence ISS] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0051011 - microtubule minus-end binding [Evidence ISS]; GO:0005523 - tropomyosin binding [Evidence IEA] GO_process : GO:0051271 - negative regulation of cell motility [Evidence ISS]; GO:0051694 - pointed-end actin filament capping [Evidence ISS] codon_start : 1 note : ubiquitous tropomodulin product : tropomodulin 3 protein_id : NP_058659.1

name	Tmod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84697031 CCDS:CCDS23345.1 GeneID:50876 MGI:1355335
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005523 - tropomyosin binding [Evidence ISS] [Evidence IEA] GO_process : GO:0007611 - learning and/or memory [Evidence IMP]; GO:0007270 - nerve-nerve synaptic transmission [Evidence IMP]; GO:0045745 - positive regulation of G-protein coupled receptor protein signaling pathway [Evidence IMP] codon_start : 1 note : neural tropomodulin product : tropomodulin 2 protein_id : NP_001033799.1

name	Tmod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543876 CCDS:CCDS23345.1 GeneID:50876 MGI:1355335
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005523 - tropomyosin binding [Evidence ISS] [Evidence IEA] GO_process : GO:0007611 - learning and/or memory [Evidence IMP]; GO:0007270 - nerve-nerve synaptic transmission [Evidence IMP]; GO:0045745 - positive regulation of G-protein coupled receptor protein signaling pathway [Evidence IMP] codon_start : 1 note : neural tropomodulin product : tropomodulin 2 protein_id : NP_057920.2

name	Lysmd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:130490961 GeneID:70082 MGI:1917332
definition	GO_process : GO:0016998 - cell wall catabolism [Evidence IEA] codon_start : 1 product : LysM, putative peptidoglycan-binding, domain containing 2 protein_id : NP_081585.2

name	Scg3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677867 CCDS:CCDS23347.1 GeneID:20255 MGI:103032
definition	codon_start : 1 product : secretogranin III protein_id : NP_033156.1

name	Bmp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66792782 CCDS:CCDS23348.1 GeneID:12160 MGI:88181
definition	GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0040007 - growth [Evidence IEA]; GO:0001503 - ossification [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001501 - skeletal development [Evidence IMP]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IEA] codon_start : 1 note : short ear product : bone morphogenetic protein 5 protein_id : NP_031581.2

name	EG620071 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82931765 GeneID:620071 MGI:3647285
definition	codon_start : 1 product : similar to Chain C, Structure Of A Hif-1a-Pvhl-Elonginb-Elonginc Complex protein_id : XP_889554.1

name	Hmgcll1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239379 CCDS:CCDS23349.1 GeneID:208982 MGI:2446108
definition	GO_function : GO:0016829 - lyase activity [Evidence IEA] codon_start : 1 product : 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 protein_id : NP_776092.1

name	Gfral (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48762515 GeneID:404194 MGI:3607786
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0031098 - stress-activated protein kinase signaling pathway [Evidence IDA] codon_start : 1 product : GDNF receptor alpha-like protein_id : NP_995316.2

name	Hcrtr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42821120 CCDS:CCDS23350.1 GeneID:387285 MGI:2680765
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016499 - orexin receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007200 - G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : hypocretin (orexin) receptor 2 protein_id : NP_945200.1

name	C530008M07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113931644 GeneID:208994 MGI:2685362
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA] codon_start : 1 product : hypothetical protein LOC208994 protein_id : NP_001038983.1

name	Tinag (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981314 CCDS:CCDS23351.1 GeneID:26944 MGI:1349477
definition	codon_start : 1 exception : mismatches in translation product : tubulointerstitial nephritis antigen protein_id : NP_036163.2

name	2310046A06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260083 GeneID:69642 MGI:1916892
definition	codon_start : 1 product : hypothetical protein LOC69642 protein_id : XP_001478741.1

name	2310046A06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260081 GeneID:69642 MGI:1916892
definition	codon_start : 1 product : hypothetical protein LOC69642 protein_id : XP_001478733.1

name	LOC384954 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260030 GeneID:384954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 49 Proteins product : similar to alpha-2-tubulin pseudo : _no_value transcript_id : XR_032200.1

name	LOC100042107 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260079 GeneID:100042107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 282 ESTs, 17 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_033791.1

name	LOC436082 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260037 GeneID:436082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : similar to ADAM4 pseudo : _no_value transcript_id : XR_032309.1

clone name	MSMg01-509F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394B07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-478H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075L20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-419H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453F08
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-348A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107M18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-054J19.b	B6Ng01-054J19.g
ACC	DH877309	DH877310
length	993	1,261
definition	DH877309\|Mus musculus domesticus DNA, BAC clone: B6Ng01-054J19, 5' end.	DH877310\|Mus musculus domesticus DNA, BAC clone: B6Ng01-054J19, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcatccatttgagctctgcccctcattactgtaaattgctctcatg ggtctccactgcaatgattaaagctcatggtgtcattgtatcaattttct tatttcccttatctgcaccaaacgtctgccaataagtaacgaacagagaa ttttagatgcacacaatagatgatgtttagttttgtttcacatcctgcag cacggcttcacaccatcctactctgtcccatcctgatggaaaatctctct tctgctcagcatacacatgtggtatatcatactgggttgttagtcacatg agatctcagtgcctatgtttataagtgtgcgtgcgtgcatgtatatgtat atatatcattattaactaacaattatctccaaatgaaatagcataggtga tggaaattaggataatccaaaaagactctaaaagaacctctttttaagtg aaaagatgaaaattcttgacttaataatgaaatggaaggtgagcatgatg ctgagacttttggtaactctctcttccccttgttcctccccattcccctt cctcctcctcctcttccttgtcattactttcaattctgcctgacttataa aacttttttcttaactatgtctaagtatgtacacacagagagacagaaag agagagacagacagagatacacacacacacacacacacatacacacacac acacacacacacacacatacacacacacacacacacacacactttctgag acttcaagcctctaccagaggctactactataccactataggtgattgct tttaagtggaaaaggaaaggtcttggtatttctatgtctaatgtgtcaca ctatcagagtcttacaagaaaaaatatatacacttgtttgcgatatctat gaaaatgaaacgcactgggattgttttttctggatgactctcttcacttc taggttaatgagggaaggaaatggaatttattctgggtctggg	gaattcagtaagaatgttacctattcagtaacattcaaatttacttctag tagagacagtgaaactaattaggcattacaaagaacggagctaggatagc tcagggctagtctgcagagtgattacttaggacagtagccagtctcatcc aaacaagggaatacacaatggcctagggaataggtagatttaccatgaaa gagttagggaatccccctgagacaggtttcttcactaggcccaaagaaac agcataaatcaggcatttactaagaacccctggtgacgggcttaataata gactagcattatacctggctcccttcttagtggtaaacagcagaggcctg gtccccaccatcttttgatgtatacattccttatgtttgttttgtgtcac tgtaactcggtggatgtatcttgcctggtttcttgtcactcttctgtata aaaagtttgatgctcaacttgaaaaattacactcagagtctacacaatct ctcgtgtcgcatctgtttgtcattcattcgccgactccttgcccacctgc aactagagacctgttctatgcagacagggacaaaaaaggatctgaggcag tggctgggtatagcgtgggctggtggcattttttactatttcccacaaca attttcaatgatttaattttatttttgagaactctatagataagcactat atctatataactctacttcttctttgtccactctaactactcctccatca cccctcccctctccacactcttcttcagttattattataattattattac tgttattattattacatatgtatgcacacacacatacacataacctacag agtccatttaactttgctcctatatgtacatgtgctcaaagctgacagcc tggttttggataatctatgtgagagctcaccattgaagaaaactgattct cctctcacaccagtcattcattgactgtctatagctgaatccccatgccc atgcattatcttaaatctactgagtccacttaatactgcctttatatgca tgggcatagggccactgatagaggcatgagtcaccatcgaagaacacatt cttacttcaatagcacctcagcaaggtaggccttataagtgtccctacat ctgtgctgacctttgtctgcctgattgttcaggtgcctggatcatgtgta caggacttgtctagttctgccaaagctaattctgcgaaagatacaccaac tcctcgataca
quality values	Open. 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Hide. 55 47 52 49 61 49 59 61 59 59 59 55 55 49 59 59 59 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 59 61 59 61 61 55 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 53 61 61 61 61 61 61 57 43 53 57 53 53 53 53 53 53 53 53 57 57 57 53 53 53 57 57 57 57 53 57 53 57 53 57 57 53 53 53 53 53 57 52 47 53 57 53 57 57 53 53 53 57 53 52 57 57 57 47 53 52 57 57 57 53 46 53 57 40 43 53 57 53 57 32 51 38 57 45 50 57 52 42 57 57 57 53 50 45 52 53 52 52 41 37 57 57 52 45 53 53 47 45 57 52 35 28 38 57 57 57 57 42 50 50 50 53 53 57 46 47 33 41 42 50 30 53 43 50 53 52 57 57 57 38 44 41 47 57 53 33 57 37 35 47 45 57 57 53 37 41 57 41 41 57 36 50 28 40 38 39 53 50 53 50 50 53 38 38 30 34 41 37 53 50 39 39 57 50 53 50 57 50 53 44 53 50 52 52 37 53 53 39 53 47 53 53 48 33 53 40 53 53 57 57 33 36 36 37 38 53 40 30 37 47 37 37 44 40 40 26 33 40 31 37 24 30 35 41 37 27 44 34 37 27 53 44 30 45 32 45 25 33 36 36 44 30 47 40 53 37 37 33 47 33 36 39 43 38 30 28 48 38 28 33 30 25 44 40 21 30 30 23 29 38 31 19 28 29 30 46 31 43 32 26 31 31 38 35 38 37 23 29 34 21 29 30 33 48 28 29 23 40 44 28 45 25 39 23 45 28 46 24 29 27 47 21 47 21 29 27 23 17 27 27 29 30 29 34 46 34 29 29 31 28 35 46 35 24 36 24 34 46 34 24 32 35 27 29 30 33 28 28 23 23 18 23 23 19 29 30 16 21 22 29 27 28 51 33 28 24 29 23 35 18 29 28 28 29 34 28 25 17 39 36 23 28 25 27 9 15 15 21 34 30 17 14 29 23 19 33 15 41 12 11 21 10 14 8 27 18 19 23 29 39 19 12 38 51 51 29 18 27 34 34 29 19 18 17 30 30 19 13 28 26 23 16 17 7 18 17 23 22 31 26 25 19 28 21 18 16 25 26 20 13 26 5 6 8 16 12 17 26 31 25 10 22 22 15 20 44 44 20 6 9 33 34 44 16 18 23 34 23 22 24 10 28 16 31 31 28 6 42 15 14 17 7 8 15 14 26 7 5 5 21 17 13 14 21 13 30 29 12 21 15 11 21 10 21 18 31 7 12 8 12 12 17 22 24 12 30 42 23 7 9 12 8 14 31 22 24 18 4 13 9 17 22 13 14 4 3 4 8 6 4 6 4 9 8 23 9 4 8 13 10 26 10 4 7 4 4 5 5 4 4 8 5 17 9 10 4 13 15 15 5 26 15 24 7 10 5 4 4 4 16 9 5 11 7 4 6 4 5 17 17 3 9 6 18 4 5 27 8 8 7 6 18 6 7 19 8 13 23 10 13 4 3 15 4 5 8 6 9 6 4 3 8 5 4 2 3 18 13 6 3 4 8 12 4 14 3 3 4 4 3 3 2 3 4 11 6 3 5 5 4 3 4 5 1 2 3 1 3 4 14 8 4 9 5 4 6 8 17 8 4 9 18 7 6 12 6 6 6 9 6 4 12 5 3 1 4 7 2 3 5 3 4 9 8 3 3 5 4 4 3 6 5 13 7 9 11 5 9 5 1 1 2 3 7 6 5 21 2 1 2 3 3 9 3 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_76145260_76146249
seq2: B6Ng01-054J19.b_46_1038

seq1  GAATTCATCCATTTGAGCTCTGCCCCTCATTACTGTAAATTGCTCTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCATTTGAGCTCTGCCCCTCATTACTGTAAATTGCTCTCATG  50

seq1  GGTCTCCACTGCAATGATTAAAGCTCATGGTGTCATTGTATCAATTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCACTGCAATGATTAAAGCTCATGGTGTCATTGTATCAATTTTCT  100

seq1  TATTTCCCTTATCTGCACCAAACGTCTGCCAATAAGTAACGAACAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCCTTATCTGCACCAAACGTCTGCCAATAAGTAACGAACAGAGAA  150

seq1  TTTTAGATGCACACAATAGATGATGTTTAGTTTTGTTTCACATCCTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATGCACACAATAGATGATGTTTAGTTTTGTTTCACATCCTGCAG  200

seq1  CACGGCTTCACACCATCCTACTCTGTCCCATCCTGATGGAAAATCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCTTCACACCATCCTACTCTGTCCCATCCTGATGGAAAATCTCTCT  250

seq1  TCTGCTCAGCATACACATGTGGTATATCATACTGGGTTGTTAGTCACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCAGCATACACATGTGGTATATCATACTGGGTTGTTAGTCACATG  300

seq1  AGATCTCAGTGCCTATGTTTATAAGTGTGCGTGCGTGCATGTATATGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCAGTGCCTATGTTTATAAGTGTGCGTGCGTGCATGTATATGTAT  350

seq1  ATATATCATTATTAACTAACAATTATCTCCAAATGAAATAGCATAGGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCATTATTAACTAACAATTATCTCCAAATGAAATAGCATAGGTGA  400

seq1  TGGAAATTAGGATAATCCAAAAAGACTCTAAAAGAACCTCTTTTTAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTAGGATAATCCAAAAAGACTCTAAAAGAACCTCTTTTTAAGTG  450

seq1  AAAAGATGAAAATTCTTGACTTAATAATGAAATGGAAGGTGAGCATGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGAAAATTCTTGACTTAATAATGAAATGGAAGGTGAGCATGATG  500

seq1  CTGAGACTTTTGGTAACTCTCTCTTCCCCTTGTTCCTCCCCATTCCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACTTTTGGTAACTCTCTCTTCCCCTTGTTCCTCCCCATTCCCCTT  550

seq1  CCTCCTCCTCCTCTTCCTTGTCATTACTTTCAATTCTGCCTGACTTATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCCTCTTCCTTGTCATTACTTTCAATTCTGCCTGACTTATAA  600

seq1  AACTTTTTTCTTAACTATGTCTAAGTATGTACACACAGAGAGACAGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTTCTTAACTATGTCTAAGTATGTACACACAGAGAGACAGAAAG  650

seq1  AGAGAGACAGACAGAGATACACACACACACACACACACATACACACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGACAGAGATACACACACACACACACACACATACACACACAC  700

seq1  AC----------------ACACACACACACACACACACACACTTTCTGAG  734
      ||                ||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACATACACACACACACACACACACACACTTTCTGAG  750

seq1  ACTTCAAGCATCTACCAGAGGCTACTACTATACCACTATAGGTGATTGCT  784
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAGCCTCTACCAGAGGCTACTACTATACCACTATAGGTGATTGCT  800

seq1  TTTAAGTGGAAAAGGAAAAGGTCTTGGTTATTTCTATGTCTAATGAGTCA  834
      ||||||||||||||| ||||||||||| ||||||||||||||||| ||||
seq2  TTTAAGTGGAAAAGG-AAAGGTCTTGG-TATTTCTATGTCTAATGTGTCA  848

seq1  CACTAGCAAGAGTCTTAAAAGAAAAAATATATACACTTGTTTTTCACAGA  884
      ||||| | ||||||||| |||||||||||||||||||||  |||   | |
seq2  CACTATC-AGAGTCTTACAAGAAAAAATATATACACTTG--TTTGCGATA  895

seq1  TCTATGAAAATGTAACACACTGTGATTTTTTTTTCTTGGATGACCTCTCT  934
      |||||||||||| ||| ||||| |||| ||||||| ||||||| ||||||
seq2  TCTATGAAAATGAAACGCACTGGGATTGTTTTTTC-TGGATGA-CTCTCT  943

seq1  TTGACCTTCTAGGATGACTGAGGGAAGGGAAATGGAAATTTAGTTCTGGG  984
      |    |||||||| | | |||||||| |||||||| |||||| |||||||
seq2  T--CACTTCTAGG-TTAATGAGGGAA-GGAAATGG-AATTTA-TTCTGGG  987

seq1  TCTGGG  990
      ||||||
seq2  TCTGGG  993

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information