BAC Information

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BAC

Clone NameB6Ng01-055G05
Chromosome9 (Build37)
Map Location 37,740,190 - 37,741,308
singlet/doubletsinglet
Overlap genenone
Upstream genePknox2, LOC100042545, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878
Downstream geneGA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055G05.bB6Ng01-055G05.g
ACCDH877848DH877849
length1,1601,117
definitionDH877848|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G05, 5' end.DH877849|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatatatattggatattag
tcccctatctgatttagaataggtaaagatactttcccaatctgttggtg
gcctttttgtcttattgacagtgtcttttgccttacagaagctttgcagt
ttcatgaggtcccatttgtcaattctcaatcttatagcacaagccattgc
tgttctactggaggatcctgcaatacctctcctcggtatatatccagaag
atgttccaattagtaagaaagacacatgctccactatgttcatagcagcc
ttatttacttatttatttatttatttatttatttatttatttatttattt
attaccatcaggttgggaaatgatctttaccaattctacatccaatagag
gactaatagccaataatgtacaaagaactcaaaaagttggactctagaga
accaaataaccctattaaaatatggggtacagagctaaacaaagaattct
caactgaggaaactctaatggtcaagatgtaccaacagaaatgttcaaca
ttttcaatcatcagggaaatgcaaatcaaaagaaccctgagattccacct
cacatcagtcagaatggctaagattaaaaactcaggtgacagcagatgct
gacaaggatgtcgagaaagaggaatactcctccactgctggtggaattgc
aagctggtacaaccactctgaaaatcagtttggtggttcctcaaaaactg
gaaattgtgctactgaggacccagcatcaccactcctgggatatatccag
aagatgctccaacatgtataaaggacacattctccactatgttaatagca
gccttttttatatagccagaagctggaaagaacccagatgtccctcacag
aggatggatacagaaaatgtggtacagtttcaaatggagtactatgcagc
tactaatcatttattatgaaatttttaggcaatggatcctgaggatatat
cttggagtgagttacccatccaaagaccatatgaattgcattctctgtta
gtggaattccccagagtcggaaatcccatgatcattcccaaccgcatgaa
ctccgatgta
gaattcatggcaaaatgatcagttttgcatccacatttattatttggaat
gatcactccaggagatgtgggaaggtgcctaaatgattcagttctgttca
gcagaaccaagtgaaggacccagaatgcctctagggctcatttagatgct
tcttatacagaaaagtaataaagaaacaaagagataaaggtggccagcat
ctggaaagcagccaatctgtgtggagaggaggaaatgagaggcccagaag
gcaggactaccagacatctctagagggtctcagaaatttgtaagtgattt
ctcaggagttgaatttttgtattaattagtgagagttctttggatgttat
gcaacttaatgaatcatttgtcattttaaaatctcaggactagtatcact
caagtccatggtgaaagatgcaagacagctctggtgaataaacattccat
ttctgtatagctatgtcttggcacagttacctgaaggaaaggtgatctaa
ttctccccagataaaggacatcacagacccaacaaagacaagctcctcaa
actatatcaagtggcaactcaatcaactgtaaaatccatatgccttcaaa
atgtcataaataagttcatttgagttcttaaaacatatgaagtatggaga
atttgtataaagaatgcatgacccttcttgatgtccagaaactaattcac
tttacaaagacaaaatcttccagttggcatgttagtagatccttgtacag
ttagtagatcagcccattgtatagttttaaagcagatatatttgctttaa
agaacattgtgcacattttaattacagcaggtaaagtattttaaagtggt
tttgtacatacacagacgcgcgcgcgcgcatgcacacacatggtgcacac
atgcacacacacacaaggacacaatgcctagccctacaaatataaagaca
taactgagagattcagcaaacactaaaccactacgcaaggaggtcaccta
agtagccaccaggtggtgctagtgactccaataaccatcgatcaaggcta
aaaggagcgggaagggagggggatttccctgctatttcctagtctgattc
ttttcactctgaaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37740190_37741308
seq2: B6Ng01-055G05.g_68_1184 (reverse)

seq1  ACATTTCAGAGCTTGAAAAAGATTCAGAATATGAATTAGCAGCGAAATCC  50
      |||||||||||  || |||||| ||||| || ||| |||||| |||||||
seq2  ACATTTCAGAG--TG-AAAAGAATCAGACTAGGAAATAGCAGGGAAATCC  47

seq1  TCCTCCC-TCCCGCTTCCTTTTCGCCTTGATCGAT-GTTATT-GAGTCAC  97
       |||||| |||||| ||||||| |||||||||||| |||||| |||||||
seq2  CCCTCCCTTCCCGC-TCCTTTTAGCCTTGATCGATGGTTATTGGAGTCAC  96

seq1  TAGCACCACCTGGTGGCTACTTAAGTGAACCTCCTGGCGTAGTGGTTTAG  147
      ||||||||||||||||||||||| ||| ||||||| ||||||||||||||
seq2  TAGCACCACCTGGTGGCTACTTAGGTG-ACCTCCTTGCGTAGTGGTTTAG  145

seq1  TGTTTGCTGAATCTTCTCAGTTATGTCTTTATACTTTGTAGGGCTAGGCA  197
      ||||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  TGTTTGCTGAATC-TCTCAGTTATGTCTTTATA-TTTGTAGGGCTAGGCA  193

seq1  TTGTGTCCTTGTGTGTGTGTGCATGTGTGCA-CATGTGTGTGCATGCGCG  246
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGTGTCCTTGTGTGTGTGTGCATGTGTGCACCATGTGTGTGCATGCGCG  243

seq1  CGCGCGCGTCTGTGTATGTACAAAACCACTTT-AAATACTTTACCTGCTG  295
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CGCGCGCGTCTGTGTATGTACAAAACCACTTTAAAATACTTTACCTGCTG  293

seq1  TAATTAAAATGTGCACAATGTTCTTTAAAGCAAATATATCTGCTTTAAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAATGTGCACAATGTTCTTTAAAGCAAATATATCTGCTTTAAAA  343

seq1  CTATACAATGGGCTGATCTACTAACTGTACAAGGATCTACTAACATGCCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAATGGGCTGATCTACTAACTGTACAAGGATCTACTAACATGCCA  393

seq1  ACTGGAAGATTTTGTCTTTGTAAAGTGAATTAGTTTCTGGACATCAAGAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAGATTTTGTCTTTGTAAAGTGAATTAGTTTCTGGACATCAAGAA  443

seq1  GGGTCATGCATTCTTTATACAAATTCTCCATACTTCATATGTTTTAAGAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATGCATTCTTTATACAAATTCTCCATACTTCATATGTTTTAAGAA  493

seq1  CTCAAATGAACTTATTTATGACATTTTGAAGGCATATGGATTTTACAGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATGAACTTATTTATGACATTTTGAAGGCATATGGATTTTACAGTT  543

seq1  GATTGAGTTGCCACTTGATATAGTTTGAGGAGCTTGTCTTTGTTGGGTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAGTTGCCACTTGATATAGTTTGAGGAGCTTGTCTTTGTTGGGTCT  593

seq1  GTGATGTCCTTTATCTGGGGAGAATTAGATCACCTTTCCTTCAGGTAACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTCCTTTATCTGGGGAGAATTAGATCACCTTTCCTTCAGGTAACT  643

seq1  GTGCCAAGACATAGCTATACAGAAATGGAATGTTTATTCACCAGAGCTGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAGACATAGCTATACAGAAATGGAATGTTTATTCACCAGAGCTGT  693

seq1  CTTGCATCTTTCACCATGGACTTGAGTGATACTAGTCCTGAGATTTTAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATCTTTCACCATGGACTTGAGTGATACTAGTCCTGAGATTTTAAA  743

seq1  ATGACAAATGATTCATTAAGTTGCATAACATCCAAAGAACTCTCACTAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAATGATTCATTAAGTTGCATAACATCCAAAGAACTCTCACTAAT  793

seq1  TAATACAAAAATTCAACTCCTGAGAAATCACTTACAAATTTCTGAGACCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAAAAATTCAACTCCTGAGAAATCACTTACAAATTTCTGAGACCC  843

seq1  TCTAGAGATGTCTGGTAGTCCTGCCTTCTGGGCCTCTCATTTCCTCCTCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGATGTCTGGTAGTCCTGCCTTCTGGGCCTCTCATTTCCTCCTCT  893

seq1  CCACACAGATTGGCTGCTTTCCAGATGCTGGCCACCTTTATCTCTTTGTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGATTGGCTGCTTTCCAGATGCTGGCCACCTTTATCTCTTTGTT  943

seq1  TCTTTATTACTTTTCTGTATAAGAAGCATCTAAATGAGCCCTAGAGGCAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTACTTTTCTGTATAAGAAGCATCTAAATGAGCCCTAGAGGCAT  993

seq1  TCTGGGTCCTTCACTTGGTTCTGCTGAACAGAACTGAATCATTTAGGCAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTCCTTCACTTGGTTCTGCTGAACAGAACTGAATCATTTAGGCAC  1043

seq1  CTTCCCACATCTCCTGGAGTGATCATTCCAAATAATAAATGTGGATGCAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCACATCTCCTGGAGTGATCATTCCAAATAATAAATGTGGATGCAA  1093

seq1  AACTGATCATTTTGCCATGAATTC  1119
      ||||||||||||||||||||||||
seq2  AACTGATCATTTTGCCATGAATTC  1117