BAC Information

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BAC

Clone NameB6Ng01-057P19
Chromosome16 (Build37)9 (Build37)
Map Location 60,604,507 - 60,605,17963,339,520 - 63,339,752
singlet/doubletsingletsinglet
Overlap geneEpha6, EG668168
Upstream geneArl6, LOC100043804
Downstream geneLOC668170, LOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057P19.bB6Ng01-057P19.g
ACCDH879689DH879690
length673486
definitionDH879689|Mus musculus domesticus DNA, BAC clone: B6Ng01-057P19, 5' end.DH879690|Mus musculus domesticus DNA, BAC clone: B6Ng01-057P19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(60,604,507 - 60,605,179)(63,339,520 - 63,339,752)
sequence
gaattcaagagactgaagagatcaaagccccaggggcccgctggacccgg
gtggtctaatcagggctccctggaactcagagtgtggcaagtccagagga
gctgacccagggacaaagttacctgcagtagtggacaagtgtactcgggg
caccctcctccaacccttctgtttgtcccttaccttggttggagacgtga
ctgcagtcgccggtccaagccgttagcaggggcaagaagaaaccaaattg
caaaagaaattcccggacttcgcagccccccatggctctggttggttctc
ttctcctccttaaaaagaagtggcagcagcgcagccaggtgttcctagta
gcgtgggggtcctgaaccaagctctcttcttcttcctcctcctcctcttc
ctcctccacccggtccgcaggggaagtcccggggcgccccccgcgcgagg
cccggtgcgcagggcacgagggtccaggctgcccaggtgctggagcagct
gcttgcggggacgatgctgcctgcgccgccggggagctcctggcggctgg
aggcgaggggaattgcatccaccaccgtgtcccgctcgagcgaggactat
tcacttgggcccaggagagcgcgcgcgcaagagcgagctcaggctctagt
ttgggggaggggatggtggacgg
agaatgaactagaaaggatgagctaatgttgtggatatccttggggctaa
ttatatttgatgttaatcccattctcctgtgagtggttgtgaataaggaa
tgaatcaacactcaggtgatttcctacaaacctgcttccgatcttaattt
gtaaaataaaggacagttgatgattaggaagataaaagggaaggtggagc
agaaggtgagggagagaaggagaaaatggaagagggagaggatgcaaagg
aggcagatctgcctctctcagatcttcctgggaaacagccacaaccaaat
caccatgactctttaagttgccgtttgtttatctggaaatagataacagt
acaggtgtacatggagctgtgatgagggttaagtgtatcctgtgacttgg
ccagcaatagtcttagcatgtggacgtttaagatatttttgctttgttgc
tttttattatgaatattaattaaagttctattatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_60604507_60605179
seq2: B6Ng01-057P19.b_44_716

seq1  GAATTCAAGAGACTGAAGAGATCAAAGCCCCAGGGGCCCGCTGGACCCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGACTGAAGAGATCAAAGCCCCAGGGGCCCGCTGGACCCGG  50

seq1  GTGGTCTAATCAGGGCTCCCTGGAACTCAGAGTGTGGCAAGTCCAGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTAATCAGGGCTCCCTGGAACTCAGAGTGTGGCAAGTCCAGAGGA  100

seq1  GCTGACCCAGGGACAAAGTTACCTGCAGTAGTGGACAAGTGTACTCGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCCAGGGACAAAGTTACCTGCAGTAGTGGACAAGTGTACTCGGGG  150

seq1  CACCCTCCTCCAACCCTTCTGTTTGTCCCTTACCTTGGTTGGAGACGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCTCCAACCCTTCTGTTTGTCCCTTACCTTGGTTGGAGACGTGA  200

seq1  CTGCAGTCGCCGGTCCAAGCCGTTAGCAGGGGCAAGAAGAAACCAAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTCGCCGGTCCAAGCCGTTAGCAGGGGCAAGAAGAAACCAAATTG  250

seq1  CAAAAGAAATTCCCGGACTTCGCAGCCCCCCATGGCTCTGGTTGGTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAATTCCCGGACTTCGCAGCCCCCCATGGCTCTGGTTGGTTCTC  300

seq1  TTCTCCTCCTTAAAAAGAAGTGGCAGCAGCGCAGCCAGGTGTTCCTAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCCTTAAAAAGAAGTGGCAGCAGCGCAGCCAGGTGTTCCTAGTA  350

seq1  GCGTGGGGGTCCTGAACCAAGCTCTCTTCTTCTTCCTCCTCCTCCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGGGGTCCTGAACCAAGCTCTCTTCTTCTTCCTCCTCCTCCTCTTC  400

seq1  CTCCTCCACCCGGTCCGCAGGGGAAGTCCCGGGGCGCCCCCCGCGCGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCACCCGGTCCGCAGGGGAAGTCCCGGGGCGCCCCCCGCGCGAGG  450

seq1  CCCGGTGCGCAGGGCACGAGGGTCCAGGCTGCCCAGGTGCTGGAGCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGTGCGCAGGGCACGAGGGTCCAGGCTGCCCAGGTGCTGGAGCAGCT  500

seq1  GCTTGCGGGGACGATGCTGCCTGCGCCGCCGGGGAGCTCCTGGCGGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCGGGGACGATGCTGCCTGCGCCGCCGGGGAGCTCCTGGCGGCTGG  550

seq1  AGGCGAGGGGAATTGCATCCACCACCGTGTCCCGCTCGAGCGAGGACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGAGGGGAATTGCATCCACCACCGTGTCCCGCTCGAGCGAGGACTAT  600

seq1  TCACTTGGGCCCAGGAGAGCGCGCGCGCAAGAGCGAGCTCAGGCTCTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGGGCCCAGGAGAGCGCGCGCGCAAGAGCGAGCTCAGGCTCTAGT  650

seq1  TTGGGGGAGGGGATGGTGGACGG  673
      |||||||||||||||||||||||
seq2  TTGGGGGAGGGGATGGTGGACGG  673

seq1: chr9_63339520_63339752
seq2: B6Ng01-057P19.g_329_561 (reverse)

seq1  TCATAATAGAACTTTAATTAATATTCATAATAAAAAGCAACAAAGCAACA  50
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCATAATAGAACTTTAATTAATATTCATAATAAAAAGCAACAAAGCAAAA  50

seq1  ATATCTTAAACGTCCACATGCTAAGACTATTGCTGGCCAAGTCACAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTAAACGTCCACATGCTAAGACTATTGCTGGCCAAGTCACAGGAT  100

seq1  ACACTTAACCCTCATCACAGCTCCATGTACACCTGTACTGTTATCTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAACCCTCATCACAGCTCCATGTACACCTGTACTGTTATCTATTT  150

seq1  CCAGATAAACAAACGGCAACTTAAAGAGTCATGGTGATTTGGTTGTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATAAACAAACGGCAACTTAAAGAGTCATGGTGATTTGGTTGTGGCT  200

seq1  GTTTCCCAGGAAGATCTGAGAGAGGCAGATCTG  233
      |||||||||||||||||||||||||||||||||
seq2  GTTTCCCAGGAAGATCTGAGAGAGGCAGATCTG  233