BAC Information

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BAC

Clone NameB6Ng01-058P10
Chromosome9 (Build37)
Map Location 76,882,913 - 76,883,481
singlet/doubletsinglet
Overlap geneTinag
Upstream geneHmgcll1, Gfral, Hcrtr2, C530008M07Rik
Downstream geneLOC436082, 2310046A06Rik, 5730403I07Rik, Lrrc1, Klhl31, Gclc, LOC100042212, Elovl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058P10.bB6Ng01-058P10.g
ACCDH880398DH880399
length1,0471,009
definitionDH880398|Mus musculus domesticus DNA, BAC clone: B6Ng01-058P10, 5' end.DH880399|Mus musculus domesticus DNA, BAC clone: B6Ng01-058P10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttcagattcatatgccacccttcccctttagatttagtcatc
tcttttcacgagtctttaattttttttttagttctttgtgtagtgttgag
gagcattcagcaccttgtttattccaagtttttgtttgtttgttggttgg
ttggttgattattaaagttatagtgaatgatatctgttcttactgaaatt
ttcttatcaaatttattatcagtatatagaaaggttactgggttttgcat
attgattttgtattttgctatttttctgaaaaatttcacctgatctagaa
tcttctttatgattaagatcatgttgtctaccaatgcagatactgcagct
tcttcctgttttacagctacccttttggattctggctctgtctaatctta
atatcttaagcagtattttgaaaataacatagattgggaattcgtggccc
tgattttaaccctaatattgctaactttcgggttatttaatatttagcat
aatgctggctatacatagtcaaaattatagcattttttaaatttgtttac
cagcttccatttggctttaatgaaaactgaatattgaactttgtcacggt
ttttctatatttattagggtgatttctgtcctctaatttatatgctataa
tacatgtattgatttacatatgttgagtctggtctttgcatccctggaat
gaaatcaacttgattgtggtatgtgatcgctttaatgtatttttttaaat
tatgtttgcaaatattttattttttgtgtctatattcatcagaaaattga
tttttccttttttctattttttatgttcttgtttttgtttttttttttta
aagtagagcattcttgctgttttggaatgagctagctcatggctcttcca
tactgctttatgtaacagtttggaaatattgggctttggatgtttcttaa
tgatttggggattttggagaatccatacagttttgacctttccttgttaa
agatgtgtatactctgatggaggaaaccaattcaaaagaaaccaatg
gaattcatttcttaaaaaaaagaaaagaaaagaaaagaaaagaaaaggaa
aaagaaaaatactggaggattatgtgatactattacagaggttgggtcct
attacccttgcagtaggtgtcagattggcaaatcttaaatgttgtcacag
tatgcaagaaaaagatcaatccgagaggactgggtccatgattgtctatg
gtctcctctgcaggagtaataaataaacatgaaccatgatgtgagaggta
cagtgtgacactgaaacatcttagctaaccacgtaaactgaacactatta
gcataaccagtgtgaatgccttaaacctactgtgtttagaatcaagctgc
taattttaccaaaaaaaaaaaaaaaaaaaaaaccttccaagttgtatctt
cactatgctaattctcgtgctgaacgtgtggacaatgtaagcacacaaag
cagccaccctcaagtctggcatcttagaatgcatgctagtgcacacccct
agggtgaggattcctgattacagcaagtgacaatccctcctagagtgcag
cttcagcctgcacagatatttataacacactgtgatgaagtattttaaaa
taaaccacatgcatcatattattatcttttcttgaagcaacaggaccaac
tatttccctctccaagtaattgatgtgcctaatttctaaaagctgttaaa
gtcataagagtcccttaatttcaatagtcactagatttacttttaattta
atgtaatgctttttacaaaactctttatatgtataaacaatttggtgaac
tccctcagagatacttcatacacattttccaaaaacaaaaaacaaaacaa
aacaaaatagaattgttttatgtctccaccagcaaagtattagcttcatc
atcttagttccatctggtcccaacttctgtggactaaggctttcgaggat
ttcttatgaagcttggagtcctgtatttctagtcagctcaattcttcttc
ctattacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_76882913_76883481
seq2: B6Ng01-058P10.g_508_1076 (reverse)

seq1  TTGTAATAGGAAAGAAGAATTGAGCTGACTAGAAATACAGGACTCCAAGC  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATAGG-AAGAAGAATTGAGCTGACTAGAAATACAGGACTCCAAGC  49

seq1  -TCATAAGAAATCCTCGAAAGCCTTAGTTCAACAGAAGTTGGGACCAAGA  99
       |||||||||||||||||||||||||| || ||||||||||||||| |||
seq2  TTCATAAGAAATCCTCGAAAGCCTTAG-TCCACAGAAGTTGGGACC-AGA  97

seq1  TGGAACTAAGATGATGAAGCTAATACTTTGCTGGTGGAGACATAAAACAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTAAGATGATGAAGCTAATACTTTGCTGGTGGAGACATAAAACAA  147

seq1  TTCTATTTTGTTTTGTTTTGTTTTTTGTTTTTGGAAAATGTGTATGAAGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTGTTTTGTTTTGTTTTTTGTTTTTGGAAAATGTGTATGAAGT  197

seq1  ATCTCTGAGGGAGTTCACCAAATTGTTTATACATAT-AAGAGTTTTGTAA  248
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATCTCTGAGGGAGTTCACCAAATTGTTTATACATATAAAGAGTTTTGTAA  247

seq1  AAAGCATTACATTAAATTAAAAGTAAATCTAGTGACTATTGAAATTAAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTACATTAAATTAAAAGTAAATCTAGTGACTATTGAAATTAAGG  297

seq1  GACTCTTATGACTTTAACAGCTTTTAG-AATTAGGCACATCAATTACTTG  347
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GACTCTTATGACTTTAACAGCTTTTAGAAATTAGGCACATCAATTACTTG  347

seq1  GAGAGGGAAATAGTTGGTCCTGTTGCTTCAAGAAAAGATAATAATATGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAAATAGTTGGTCCTGTTGCTTCAAGAAAAGATAATAATATGAT  397

seq1  GCATGTGGTTTATTTTAAAATACTTCATCACAGTGTGTTATAAATATCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGGTTTATTTTAAAATACTTCATCACAGTGTGTTATAAATATCTG  447

seq1  TGCAGGCTGAAGCTGCACTCTAGGAGGGATTGTCACTTGCTGTAATCAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCTGAAGCTGCACTCTAGGAGGGATTGTCACTTGCTGTAATCAGG  497

seq1  AATCCTCACCCTAGGGGTGTGCACTAGCATGCATTCTAAGATGCCAGACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCACCCTAGGGGTGTGCACTAGCATGCATTCTAAGATGCCAGACT  547

seq1  TGAGGGTGGCTGCTTTGTGTGC  569
      ||||||||||||||||||||||
seq2  TGAGGGTGGCTGCTTTGTGTGC  569