BAC Information

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BAC

Clone NameB6Ng01-059M03
Chromosome9 (Build37)
Map Location 37,402,970 - 37,403,476
singlet/doubletsinglet
Overlap genenone
Upstream geneA630095E13Rik, Acrv1, Chek1, Stt3a, Ei24, LOC627681, Fez1, Pknox2, LOC100042545, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn
Downstream geneSpa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059M03.bB6Ng01-059M03.g
ACCDH880937DH880938
length1,177501
definitionDH880937|Mus musculus domesticus DNA, BAC clone: B6Ng01-059M03, 5' end.DH880938|Mus musculus domesticus DNA, BAC clone: B6Ng01-059M03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggctgaaaaacacctgaaaaaatg
ttcagtatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgctggtg
ggattacaagctggtacaaccactctggaaatcagaaagttggacatagt
actactggaagatccagcaatacctctcctggacatatacccagaagatg
ttccaaccggtaagaaggacacatgctccactatgttcatagcagcctca
ttaataatagccagaagatgaaaagaacccggatgtccctcaacagagga
atggatacagaaaatgtggtacatttacacaatggagtactactcagcta
ttaaaaacaacgaatttatgaaatttttaggcaaatggatatatcttgag
gatatcatcctgagtgaagtaacccaatcacaaaagaacactcatgatat
gtacccactgataatggatattagcccaaaaatttagaatacccaagata
taatttgcaaaacacatgaaactcaagaaggaagaccaaagtgtggatac
ttcgtttcttcttagaatggggaacaaaatacctatggaaggagttacag
agacaaagttcggagcagattctgaaggaatggccatccagagattgccc
cacttggggatccaccccataaacaaccaccaaacccagacactaggcag
atgtcaaaagagcctgctgacaggagcctgatatagctgtctcctgcgag
gctctgccagtgcccagcaaatacagagctggatggtcacagtcatccat
tggacagagcacaaggtacccaatgaaggagccaaagaaatacccaggga
gctgaagggactgaagccccatagaggacatcatatgaactaaccagtac
cctcagagctccttgaaactatatcacagtcaagaaaacacatggtggac
ttgtgctctagctatatatttagcgagatggctaatcgtcatcagtggga
tggaaggcttggtctgtgagctctatgcctaatatagaggaatgccagac
cagaatggggatgtggtgtggttgggg
ttagcttttttcttcctaaaacatatgtgaagtatgcagataagaaagga
aattagaacaattcatgttctccccacccagcctcattgattcacagcag
actttagtgaatcaggctgtcctctaatacacactctgccagcctcggcc
tttgggagtgctgggactgcaggggtttgccattgtaccaggcttctctc
cattgattgagtgattgatttacaagaaataaaacaggggctggagaggt
agctcagtctgtaagaggtagtcctgctcttgttgaggtaagagttgggt
ttccagctcccactctgggttgctcacaacctcctatgattcaggatctg
atgcctctagcccatgtaggcacatgactacactcaaggtcacatgccca
tacctcacccatacgtgccccaagttaaaaataatcagtctttaaaaaag
agaaacaaaactgtgtgtgtgtatgtgtgtatgtgtgtatgtgtgtgtgt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37402970_37403476
seq2: B6Ng01-059M03.g_70_576

seq1  GAATTCTTAGCTTTTTTCTTCCTAAAACATATGTGAAGTATGCAGATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCTTTTTTCTTCCTAAAACATATGTGAAGTATGCAGATAAG  50

seq1  AAAGGAAATTAGAACAATTCATGTTCTCCCCACCCAGCCTCATTGATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAATTAGAACAATTCATGTTCTCCCCACCCAGCCTCATTGATTCA  100

seq1  CAGCAGACTTTAGTGAATCAGGCTGTCCTCTAATACACACTCTGCCAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGACTTTAGTGAATCAGGCTGTCCTCTAATACACACTCTGCCAGCC  150

seq1  TCGGCCTTTGGGAGTGCTGGGACTGCAGGGGTTTGCCATTGTACCAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCTTTGGGAGTGCTGGGACTGCAGGGGTTTGCCATTGTACCAGGCT  200

seq1  TCTCTCCATTGATTGAGTGATTGATTTACAAGAAATAAAACAGGGGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCATTGATTGAGTGATTGATTTACAAGAAATAAAACAGGGGCTGG  250

seq1  AGAGGTAGCTCAGTCTGTAAGAGGTAGTCCTGCTCTTGTTGAGGTAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGCTCAGTCTGTAAGAGGTAGTCCTGCTCTTGTTGAGGTAAGAG  300

seq1  TTGGGTTTCCAGCTCCCACTCTGGGTTGCTCACAACCTCCTATGATTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTTCCAGCTCCCACTCTGGGTTGCTCACAACCTCCTATGATTCAG  350

seq1  GATCTGATGCCTCTAGCCCATGTAGGCACATGACTACACTCAAGGTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGATGCCTCTAGCCCATGTAGGCACATGACTACACTCAAGGTCACA  400

seq1  TGCCCATACCTCACCCATACGTGCCCCAAGTTAAAAATAATCAGTCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATACCTCACCCATACGTGCCCCAAGTTAAAAATAATCAGTCTTTA  450

seq1  AAAAAGAGAAACAAAACTGTGTGTGTGTATGTGTGTATGTGTGTATGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGAAACAAAACTGTGTGTGTGTATGTGTGTATGTGTGTATGTGT  500

seq1  GTGTGTG  507
      |||||||
seq2  GTGTGTG  507