BAC Information

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BAC

Clone NameB6Ng01-061K14
Chromosome9 (Build37)
Map Location 26,350,937 - 26,352,099
singlet/doubletsinglet
Overlap genenone
Upstream gene2310005P05Rik
Downstream geneB3gat1, BC038479, Glb1l3, Gm1110, LOC330907, Acad8, Thyn1, Vps26b, Ncapd3, Jam3, Igsf9b, Spata19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061K14.bB6Ng01-061K14.g
ACCDH882274DH882275
length1,2061,154
definitionDH882274|Mus musculus domesticus DNA, BAC clone: B6Ng01-061K14, 5' end.DH882275|Mus musculus domesticus DNA, BAC clone: B6Ng01-061K14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattgtttgttcaggtgtgagccccattttttaagggggttatttgatt
ttgtgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagcttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttgggcaagatagccatt
tttacaatgttggtcctgccaatccatgagcatgggagatcttttccatc
ttctgagatcttctttaatttcttcttcagggacttgaagtttttatcat
acagatctttcacttccttcgttagagtcacgccgagatattttatatta
attggggctattgagagggtgttgtttccctaatttctttctcagctggt
tattctttgtgtagagagaaggcattggactggtttgagttaatttaatt
caggcactttaccgaagctgcgatcaggttagaagtttctcgtgtggaat
tttagggcgcacttatatacacatactaaccacctcccaagtgaaattga
actcctcgttccaatatgtaataccctctaatccctttgtgtttccgatg
tcccgg
gaattcttctgttccgacatggtacatagacagtgtgccactgaatccca
aacaggaggggcctgagaagtacgagtagaagaaagagcaatagggaatg
ctcatgccatgctctgccatgctggtatgggtgaagttgatcctgctagc
agcaccagcagagcatcttcatcactaccatggtgccaaatctggggccg
gggagacacatatcccactccaggtatagagctagagacctagaaaatgg
caagatctgactccagagagacccttgaagcatacatgatgctgccccac
tgcagggacagctgtgggatctccttagttctgggtcctggttgcagtcc
cactgggaagttaaccctcgatgatccactggtacctttaactgatcact
ttcttccaatgaagagttttaggcaaggaagaagctgtcccaatgacaaa
aagtaaagactgaagatacacttggtctgaaaatggtgctcctaaatctc
tactccagagctcagactgacaggttttgaaggcttataggatctagggt
cataatagttatgtgctctgggcttgcttcctgtcctctctgagctgtag
tcctggcacaacatgggggtgctattccaggaaataaaaattctgtcttt
agcttggctttgtccaaattgtggctcagcctattgtactctattggtga
gagatctcttgtgttgaattgaggatttgggtaaatgcagtgtctaatat
gtactgacttggactgtgggctatagtgtccaggcaagtagtcaagcatt
gctctgggtgtatctttggggtgtctctgagtctaaagattatgaaaacc
agtttgccctttcatggaaagtaggtctcctgaaaccagttaaaggctat
actagaaccaaatatagatggatcttccaagaaggaggtgtgctgtcagc
agataagctgcaacttctggctacagctgctacagagtttggacttttcc
atactcacaaactcccaagtcgttccctagtcttcacaacgtttctcttc
tctctcaaatagcacgagttgctgttttctggaagttttgccttacagaa
ggtactgatctcttattaagagtttgttctgtcacttgggctgccctggg
aacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_26350937_26352099
seq2: B6Ng01-061K14.g_68_1221 (reverse)

seq1  GGTTCCCAGAGCCAGCCCACAATGACAGGCACAAACTCTTAAATAGGGAT  50
      ||||||||| | ||||||| | ||||| | ||||||||||||  || |||
seq2  GGTTCCCAG-GGCAGCCCA-AGTGACA-GAACAAACTCTTAATAAGAGAT  47

seq1  CTGTACCTTCTGTTTAAGCCAAGACTCTCCAGAGAAACAAGCAACACGTG  100
      | ||||||||||  |||| ||| ||| |||||| |||| |||||| ||||
seq2  CAGTACCTTCTG--TAAGGCAAAACT-TCCAGA-AAAC-AGCAACTCGTG  92

seq1  CATATTGAGAGAG-AGAGAGACGTTGTGAAGACTAGGGAACCGATTTGTG  149
      |   ||||||||| ||||| |||||||||||||||||||| ||| ||| |
seq2  CTATTTGAGAGAGAAGAGAAACGTTGTGAAGACTAGGGAA-CGACTTGGG  141

seq1  AGTTTGTGAGTATGGAAAAGTCCAAACTCTGTAGCAGCTGTAGCCAGAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTGAGTATGGAAAAGTCCAAACTCTGTAGCAGCTGTAGCCAGAAG  191

seq1  TTGCAGCTTATCTGCTGACAGCACATCTTCCTTCTTGGGAAGATCCATCT  249
      ||||||||||||||||||||||||| | |||||||| |||||||||||||
seq2  TTGCAGCTTATCTGCTGACAGCACA-CCTCCTTCTT-GGAAGATCCATCT  239

seq1  ATATTTGGTTCTAGTATAGCCTTTAACTGGTTTCAGGAGACCTACCTTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATATTTGGTTCTAGTATAGCCTTTAACTGGTTTCAGGAGACCTACTTTCC  289

seq1  ATGGAAGGGCAAACTGGTTTTCATAATCTTTAGACTCAGAGACACCCCAA  349
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGGGCAAACTGGTTTTCATAATCTTTAGACTCAGAGACACCCCAA  339

seq1  AGATACACCCAGAGCAATGCTTGACTACTTGCCTGGACACTATAG-CCAC  398
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGATACACCCAGAGCAATGCTTGACTACTTGCCTGGACACTATAGCCCAC  389

seq1  AGTCCAAGTCAGTACATATTAGACACTGCATTTACCCAAATCCTCAATTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAAGTCAGTACATATTAGACACTGCATTTACCCAAATCCTCAATTC  439

seq1  AACACAAGAGATCTCTCACCAATAGAGTACAATAGGCTGAGCCACAATTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAGAGATCTCTCACCAATAGAGTACAATAGGCTGAGCCACAATTT  489

seq1  GGACAAAGCCAAGCTAAAGACAGAATTTTTATTTCCTGGAATAGCACCCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGCCAAGCTAAAGACAGAATTTTTATTTCCTGGAATAGCACCCC  539

seq1  CATGTTGTGCCAGGACTACAGCTCAGAGAGGACAGGAAGCAAGCCCAGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGTGCCAGGACTACAGCTCAGAGAGGACAGGAAGCAAGCCCAGAG  589

seq1  CACATAACTATTATGACCCTAGATCCTATAAGCCTTCAAAACCTGTCAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAACTATTATGACCCTAGATCCTATAAGCCTTCAAAACCTGTCAGT  639

seq1  CTGAGCTCTGGAGTAGAGATTTAGGAGCACCATTTTCAGACCAAGTGTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTCTGGAGTAGAGATTTAGGAGCACCATTTTCAGACCAAGTGTAT  689

seq1  CTTCAGTCTTTACTTTTTGTCATTGGGACAGCTTCTTCCTTGCCTAAAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTCTTTACTTTTTGTCATTGGGACAGCTTCTTCCTTGCCTAAAAC  739

seq1  TCTTCATTGGAAGAAAGTGATCAGTTAAAGGTACCAGTGGATCATCGAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTGGAAGAAAGTGATCAGTTAAAGGTACCAGTGGATCATCGAGG  789

seq1  GTTAACTTCCCAGTGGGACTGCAACCAGGACCCAGAACTAAGGAGATCCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTTCCCAGTGGGACTGCAACCAGGACCCAGAACTAAGGAGATCCC  839

seq1  ACAGCTGTCCCTGCAGTGGGGCAGCATCATGTATGCTTCAAGGGTCTCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTCCCTGCAGTGGGGCAGCATCATGTATGCTTCAAGGGTCTCTC  889

seq1  TGGAGTCAGATCTTGCCATTTTCTAGGTCTCTAGCTCTATACCTGGAGTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCAGATCTTGCCATTTTCTAGGTCTCTAGCTCTATACCTGGAGTG  939

seq1  GGATATGTGTCTCCCCGGCCCCAGATTTGGCACCATGGTAGTGATGAAGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGTGTCTCCCCGGCCCCAGATTTGGCACCATGGTAGTGATGAAGA  989

seq1  TGCTCTGCTGGTGCTGCTAGCAGGATCAACTTCACCCATACCAGCATGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGCTGGTGCTGCTAGCAGGATCAACTTCACCCATACCAGCATGGC  1039

seq1  AGAGCATGGCATGAGCATTCCCTATTGCTCTTTCTTCTACTCGTACTTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATGGCATGAGCATTCCCTATTGCTCTTTCTTCTACTCGTACTTCT  1089

seq1  CAGGCCCCTCCTGTTTGGGATTCAGTGGCACACTGTCTATGTACCATGTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCCTCCTGTTTGGGATTCAGTGGCACACTGTCTATGTACCATGTC  1139

seq1  GGAACAGAAGAATTC  1163
      |||||||||||||||
seq2  GGAACAGAAGAATTC  1154