BAC Information

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BAC

Clone NameB6Ng01-063J18
Chromosome9 (Build37)
Map Location 82,636,496 - 82,637,376
singlet/doubletsinglet
Overlap genenone
Upstream gene4930486G11Rik, LOC100039085
Downstream geneIrak1bp1, Phip, LOC100039144, Hmgn3, LOC100039159, 4930431B11Rik, EG619900, LOC100039186, LOC100039200, Sh3bgrl2, LOC100039222
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063J18.bB6Ng01-063J18.g
ACCDH883651DH883652
length9641,233
definitionDH883651|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J18, 5' end.DH883652|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagtcttttactctctatgacttaatcagtttctgtcttaat
caccacctactacaaagagaagcttcattgataagttttcttcccctaag
actggcagcctttcatataattcaagttccctccaaaatttattgatcag
ccacctgacaaacataatccttaattaaatcttgctgaaaatattgagac
ttaaacagcagtggctgaatacctgatagacttgtagcatctttggtcat
ttacaggattgattctctgaatcagttttgtataagtatgacaaattatt
tgacataaaaaacttaaaagttaaaaaggagttttgggcccagtctctga
ccatttcagctcatgcagtcccactccatgttgccagaactacaatgaat
cagaagggaacacagctgtatatttcatggtgataagaaaacaggagggc
caggcggtggtggtgcatgcctttaatcccagcacttgggaggcagaggc
aggtggatttctgagttcgaggccagcctggtctacagagtgagttccag
gatagccaaggctacacagagaaaccctgactcaaaaaaaccaaaggaaa
aaaaaagaaagaataaaaagaaaacaggaggaatcggaaagccttcatcc
agcaactgctgaaagcagatacagagaggtcacacccaaacattaggcag
agatggaggaaacctatagaagaggggaaggaaagattgtagaagtcaga
ggactcaaggacaccacaagaaaacccacagaatcaacaaacctggactc
ataagggctcactgagaccgaaccaacaatcaggagcttacatgggtcta
gcctaggcctgtgtatgtgtgtatagttgtataacttagtgttttggtgg
gactcctcatagaggaagtggggggccatttctgatattttttcgggctt
tggacccttttcct
gaattcctaacaggaaataccctttagaaggatacactcccctcccaaac
tcaaacctatgttatttagaatcttgcctgactactcattctgtcaaaat
aatctgtagcaaatctatagcaaaagacgtcgaagctggcctttagggga
atgtgggacacattgtcagacgaaggctaaagactgatgatcccagcctt
acaatcttattatttgtatgttagtaagtgctggtttcttactatttgtg
ttttgataagctctgtcttcttactttgtagcactcttactatctgtgct
ttaataagagctggtttctcttctctcaagctcaaggacttcttgctggc
cagctgagagtctcagaattcattaactctccatggagtgagagaaaaga
agggaaagaattaaaatcttttacataggcaatatgcacagtctcaaaca
catacatacacacacactctggttgggcacaaccacctgtctcatcaact
ccacaagtgttcatgtatacttacatacatactcatatacctacacacat
atgtatagacaaacatatgtgtatgtacatcttgtggattggacagagcg
ccccgaagctacacatataaatgatgggtacatggggcagaggcccagat
gccgcactttattcctcctctctggccttcttatacaaaattaagacaaa
agttcttagaaaattacttcatagaaaagatgttatgcaaaaggggagtt
acagaaggatgtcaatagttaaggtcaaagcagtgttgtattctgtaggt
tcattttaagttcaaagcaacagttttacatggtctccacttttatcatc
gtgcacactgtggcttcatccttggactgacctaaaatgaatgtgtttcc
ttgatcacaaatttgtccaagcctatttctctttttcagtgtactgtgaa
cgctcactgtatctttatcatgcactttactaatattccatgaggatggg
cacctttagtttgattgatctaacttattctatattctggcaatactaaa
catctcttaactttcttctaaaatatttgatcaccagagatttaaaatca
taattactctaaaaggactgatctatgttccactctcagttgtatctcgc
aaagttgccatgctgatgatagacctgtagatgattgaaatgtgtacgaa
tagacttctggtgagagtctcatggaacatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_82636496_82637376
seq2: B6Ng01-063J18.b_44_921

seq1  GAATTCTTCAGTCTTTTACTCTCTATGACTTAATCAGTTTCTGTCTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGTCTTTTACTCTCTATGACTTAATCAGTTTCTGTCTTAAT  50

seq1  CACCACCTACTACAAAGAGAAGCTTCATTGATAAGTTTTCTTCCCCTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCTACTACAAAGAGAAGCTTCATTGATAAGTTTTCTTCCCCTAAG  100

seq1  ACTGGCAGCCTTTCATATAATTCAAGTTCCCTCCAAAATTTATTGATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAGCCTTTCATATAATTCAAGTTCCCTCCAAAATTTATTGATCAG  150

seq1  CCACCTGACAAACATAATCCTTAATTAAATCTTGCTGAAAATATTGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGACAAACATAATCCTTAATTAAATCTTGCTGAAAATATTGAGAC  200

seq1  TTAAACAGCAGTGGCTGAATACCTGATAGACTTGTAGCATCTTTGGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAGCAGTGGCTGAATACCTGATAGACTTGTAGCATCTTTGGTCAT  250

seq1  TTACAGGATTGATTCTCTGAATCAGTTTTGTATAAGTATGACAAATTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGATTGATTCTCTGAATCAGTTTTGTATAAGTATGACAAATTATT  300

seq1  TGACATAAAAAACTTAAAAGTTAAAAAGGAGTTTTGGGCCCAGTCTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAAAAAACTTAAAAGTTAAAAAGGAGTTTTGGGCCCAGTCTCTGA  350

seq1  CCATTTCAGCTCATGCAGTCCCACTCCATGTTGCCAGAACTACAATGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCAGCTCATGCAGTCCCACTCCATGTTGCCAGAACTACAATGAAT  400

seq1  CAGAAGGGAACACAGCTGTATATTTCATGGTGATAAGAAAACAGGAGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGGAACACAGCTGTATATTTCATGGTGATAAGAAAACAGGAGGGC  450

seq1  CAGGCGGTGGTGGTGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGGTGGTGGTGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGC  500

seq1  AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAG  550

seq1  GATAGCCAAGGCTACACAGAGAAACCCTGACTCAAAAAAACCAAAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCAAGGCTACACAGAGAAACCCTGACTCAAAAAAACCAAAGGAAA  600

seq1  AAAAAAGAAAGAATAAAAAGAAAACAGGAGGAATCGGAAAGCCTTCATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAGAATAAAAAGAAAACAGGAGGAATCGGAAAGCCTTCATCC  650

seq1  AGCAACTGCTGAAAGCAGATACAGAGAGGTCACACCCAAACATTAGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTGCTGAAAGCAGATACAGAGAGGTCACACCCAAACATTAGGCAG  700

seq1  AGATGGAGGAAACCTATAGAAGAGGGGAAGGAAAGATTGTAGAAGTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGGAAACCTATAGAAGAGGGGAAGGAAAGATTGTAGAAGTCAGA  750

seq1  GGACTCAAGGACACCACAAGAAAACCCACAGAATCAACAAACCTGGACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAAGGACACCACAAGAAAACCCACAGAATCAACAAACCTGGACTC  800

seq1  ATAAGGGCTCACTGAGACCGAACCAACAATCAGGGAGCTTACATGGGTCT  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATAAGGGCTCACTGAGACCGAACCAACAATCA-GGAGCTTACATGGGTCT  849

seq1  AGCCTAGGCCCTGTGTATGTGTGTTATAGTT  881
      |||||||| |||||||||||||| |||||||
seq2  AGCCTAGG-CCTGTGTATGTGTG-TATAGTT  878