BAC Information

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BAC

Clone NameB6Ng01-064A21
Chromosome9 (Build37)
Map Location 66,145,235 - 66,146,321
singlet/doubletsinglet
Overlap genenone
Upstream geneClpx, Pdcd7, Gm514, 5430433E21Rik, Rasl12, Ostb, Mtfmt, Spg21, Ankdd1a, Plekhq1, Pif1, LOC100041121, Rbpms2, Oaz2, Zfp609, LOC100041180, Trip4, 2810417H13Rik, Csnk1g1, Ppib, Snx22, Snx1, 5730536A07Rik, Dapk2
Downstream geneHerc1, Fbxl22, Usp3, Car12, Aph1b, LOC623488, Aph1c, Rab8b, Rps27l, Lactb, Tpm1, Tln2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064A21.bB6Ng01-064A21.g
ACCDH883959DH883960
length1,0881,167
definitionDH883959|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A21, 5' end.DH883960|Mus musculus domesticus DNA, BAC clone: B6Ng01-064A21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcacgggccccttttgctatgaagcaggtactctctctgcctt
ccacagcctctgtctctggattgccttccccttccttttcctgtagagat
gctggacatgatacaagaatgaggcaggaaggcagtccttccacgagaca
agcctaactgcatcctaacacatacaaggacttactgttaccaccttcag
agtctaagaggtctacgctgaatgtccagttgtatgatggaggagggggt
gttaagacttctctaggtcttgactgttttcttggtgaaagggtaccttt
caaaaagcttgtggggactgggaagatagcacagcatgaggacttaagat
caaaacccagaacccacataaaaagccaggtatcatggtagctagcatac
acttgtcattccagctctgggaaggcagggattggtgggtccttcagtct
gctagccagctaggcttgtcaagtcagcaagcttcaagtctatgacgtga
ccctgtctcataaaacaaggtggatgacattgaggaaggacatctcaggt
tgacctctgatctctaacctcacatacatcacacacacacacacacacac
acacacacacacacacgtgaaagtgagtatgtttgcagtgtctagcagac
agtggggaacaagcatccccaacttggccacagaattagtgacccatttc
tccagactctacacccagtctcacacttctaatgttctcattggaaccat
ggagcagttggtgacttaactaaccctcctcactgaggacaactacaggt
tgaatccatggggaacttccaggcacagcctccttcccttagggttccag
ttgtcaaggctgcttctccctgagaccagaagagggtagtgtcctgttct
tcccctggggctggaagcagtggttctgctgacaaggatagccctagagc
tcacactcccaccagcacacaggagagttatggagagttatagctggcct
agaactgctcctaaccttagcgatctaagagctccacagcttctgcccct
gcagtcagcagagaacaagggtctttcagcaagcttcc
gaattctttgtttagttctgtacccaatttttgatagggttatttggttc
tctggagtctaccttcttgagttctttgtaaatattacatattagccctc
tatcagatgtagggttgataaaaaatcttttcccaatctgttggttgctg
tttgtcctattgaaagtgtcctttgccttacagaagctttatgaggtccc
atttgtcaattctatttatttatttatttaatgtaagtacagtgtagctg
tccagacactccagaaaagggtgtcagacctcattatagatggttgtgag
ccaccacgtggttgctgggatttgaacttaggaccttcggaagagcagtc
agtgctcttaactgctgagccatctctccagcccgtcaattcttgatctt
aaagcataggctattggttttctgttcaggaaattttcccctgtgcccat
gtgcctgaggctcttccctacttttctattagtttcagtgtatctggttt
tatgtggaggcccttgatccacttggacttgagctttgtacagggagata
aaatggatcaaattgcattcttctacatgctaaccactagttgaaccagc
accatttgttgaaaatgctgtcttttttccagtggatggatggttttaac
tcctttgtcgaaaatcaagtgatcataggtgtgtgggttcatttctggat
cttcaattctattccattggtttacctacctgtcactgtaccagtaccat
gcagtttttatcacaattgctctgtagtacagcttgaggtctgggatgct
gattccccagaaattcttttattgttaaaaatagtttttctatcctgtgt
tttgtgttatccaagatgaatttgagaattgctctttctactctatgaga
ttagtcgaattttgatgagatagtattgaatctgtatatgcttcagcaga
tagcattttactatatatcctgcagtacaaagcatggagactttcatctc
tgagtcttctcgatttcttttgtcacaaacttgaagtctgtcatacagat
tctttcactgttgttaagtccaccagatacttattggttggactattgga
agggctcttctaattctttcacgtatccttgattagagcaaactgattgt
tcgatatttatatcggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_66145235_66146321
seq2: B6Ng01-064A21.b_46_1133

seq1  GAATTCAGCACGGGCCCCTTTTGCTATGAAGCAGGTACTCTCTCTGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACGGGCCCCTTTTGCTATGAAGCAGGTACTCTCTCTGCCTT  50

seq1  CCACAGCCTCTGTCTCTGGATTGCCTTCCCCTTCCTTTTCCTGTAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCTCTGTCTCTGGATTGCCTTCCCCTTCCTTTTCCTGTAGAGAT  100

seq1  GCTGGACATGATACAAGAATGAGGCAGGAAGGCAGTCCTTCCACGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGACATGATACAAGAATGAGGCAGGAAGGCAGTCCTTCCACGAGACA  150

seq1  AGCCTAACTGCATCCTAACACATACAAGGACTTACTGTTACCACCTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAACTGCATCCTAACACATACAAGGACTTACTGTTACCACCTTCAG  200

seq1  AGTCTAAGAGGTCTACGCTGAATGTCCAGTTGTATGATGGAGGAGGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAGAGGTCTACGCTGAATGTCCAGTTGTATGATGGAGGAGGGGGT  250

seq1  GTTAAGACTTCTCTAGGTCTTGACTGTTTTCTTGGTGAAAGGGTACCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGACTTCTCTAGGTCTTGACTGTTTTCTTGGTGAAAGGGTACCTTT  300

seq1  CAAAAAGCTTGTGGGGACTGGGAAGATAGCACAGCATGAGGACTTAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGCTTGTGGGGACTGGGAAGATAGCACAGCATGAGGACTTAAGAT  350

seq1  CAAAACCCAGAACCCACATAAAAAGCCAGGTATCATGGTAGCTAGCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCCAGAACCCACATAAAAAGCCAGGTATCATGGTAGCTAGCATAC  400

seq1  ACTTGTCATTCCAGCTCTGGGAAGGCAGGGATTGGTGGGTCCTTCAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCATTCCAGCTCTGGGAAGGCAGGGATTGGTGGGTCCTTCAGTCT  450

seq1  GCTAGCCAGCTAGGCTTGTCAAGTCAGCAAGCTTCAAGTCTATGACGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCCAGCTAGGCTTGTCAAGTCAGCAAGCTTCAAGTCTATGACGTGA  500

seq1  CCCTGTCTCATAAAACAAGGTGGATGACATTGAGGAAGGACATCTCAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCATAAAACAAGGTGGATGACATTGAGGAAGGACATCTCAGGT  550

seq1  TGACCTCTGATCTCTAACCTCACATACATCACACACACACACACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTGATCTCTAACCTCACATACATCACACACACACACACACACAC  600

seq1  ACACACACACACACACGTGAAAGTGAGTATGTTTGCAGTGTCTAGCAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACGTGAAAGTGAGTATGTTTGCAGTGTCTAGCAGAC  650

seq1  AGTGGGGAACAAGCATCCCCAACTTGGCCACAGAATTAGTGACCCATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGAACAAGCATCCCCAACTTGGCCACAGAATTAGTGACCCATTTC  700

seq1  TCCAGACTCTACACCCAGTCTCACACTTCTAATGTTCTCATTGGAACCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACTCTACACCCAGTCTCACACTTCTAATGTTCTCATTGGAACCAT  750

seq1  GGAGCAGTTGGTGACTTAACTAACCCTCCTCACTGAGGACAACTACAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGTTGGTGACTTAACTAACCCTCCTCACTGAGGACAACTACAGGT  800

seq1  TGAATCCATGGGGAACTTCCAGGCACAGCCTCCTTCCCTTAGGGTTCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCATGGGGAACTTCCAGGCACAGCCTCCTTCCCTTAGGGTTCCAG  850

seq1  TTGTCAAGGCTGCTTCTCCCTGAGACCAGAAGAGGGTAG-GT-CTGTTCT  898
      ||||||||||||||||||||||||||||||||||||||| || |||||||
seq2  TTGTCAAGGCTGCTTCTCCCTGAGACCAGAAGAGGGTAGTGTCCTGTTCT  900

seq1  TCCCCT-GGGCTGGAAGCAGT-GTTCTGCTGACAAGGATAGCCCTAAGAG  946
      |||||| |||||||||||||| ||||||||||||||||||||||| ||||
seq2  TCCCCTGGGGCTGGAAGCAGTGGTTCTGCTGACAAGGATAGCCCT-AGAG  949

seq1  CTCACACTCCCACCAGCACACAGGAGAGTTATGGGGAGAGTTATAGCCTG  996
      ||||||||||||||||||||||||||||||||  |||||||||||| |||
seq2  CTCACACTCCCACCAGCACACAGGAGAGTTAT--GGAGAGTTATAG-CTG  996

seq1  GCCTAGAAACTGCTCCCTAACCTTAGCGATCT-AGAGCTCCACAGC-TCT  1044
      |||||| ||||||| ||||||||||||||||| ||||||||||||| |||
seq2  GCCTAG-AACTGCT-CCTAACCTTAGCGATCTAAGAGCTCCACAGCTTCT  1044

seq1  GCCCCTGCAGTCAGCAGAGAACAAGGGTC-TTCAGCAAGCTTCC  1087
      ||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCCCCTGCAGTCAGCAGAGAACAAGGGTCTTTCAGCAAGCTTCC  1088