BAC Information

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BAC

Clone NameB6Ng01-064F07
Chromosome9 (Build37)
Map Location 59,732,019 - 59,733,045
singlet/doubletsinglet
Overlap geneMyo9a
Upstream geneNeo1, LOC100040186, EG665330, Adpgk, Bbs4, Arih1, LOC621119, 4930425N13Rik, Hexa, Brunol6, Parp6, Pkm2, 4933407I18Rik, Gramd2, Senp8, EG665385, LOC100040361
Downstream geneNr2e3, EG665389, Thsd4, LOC100039792, EG384942, Lrrc49, Larp6, LOC100040447, Uaca, ENSMUSG00000052143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064F07.bB6Ng01-064F07.g
ACCDH884151DH884152
length1,1811,010
definitionDH884151|Mus musculus domesticus DNA, BAC clone: B6Ng01-064F07, 5' end.DH884152|Mus musculus domesticus DNA, BAC clone: B6Ng01-064F07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatatgtgttttagatattagttcttctatatctatatagttat
atctgtagcaagttatttgtttctgcccctcctcccaaatagcacaggct
ggcctcagacttgctgtgttgttgagggtgaacttgtcataagatcttct
gcctctaccgccagagtccttatctgtctgttgtttctgatgcatattgt
cctggcaagcttttattttggttctggagatctgaactcatgtatgtagt
caatgcttgttcaactttatccaggactagagacatctctctagtcctct
aaatcacatatttggatccagttagaaatagctatatctttaaaatatta
ttttctagttatataaaagcaatatcctttatattttttaaaattacaga
attataggttatcttgggttctttgggtttcatacagttttatttctgtt
gggacgagtgtggtggtacaggcctttaatcgcagcattaaggtggcaga
agaaagaggatatctcaggctggtacctaccatgggtttgggatgctaat
caggacaacctgagcaatgggctcttttctgaataggcacgtgaacagta
aagggagttcatccctccactgtgaagtttactgcagaagtgaatttcct
gacctttgaagctggaaactaatttgatattgtctctactcccttggatt
caatcttatggatggaaaactaatctagacttacctagcactctacctca
gatgcatactctatctacttcaactcagaggtactatcgtgcccgatgac
catcgtcagacgatgtctggttgatttcaatgcgcacagcaccctgatta
cagctgtatgtatctgagcttgtgccaaatgttatgaatggtaatagaca
tcgttataccatttgcttttccacagtcttctcaaaatagactgcccacg
catgtgctcactacttgagacgtttattacatatttatgttactggtaga
tctctgtagagcatgattgctcaagtgcctttataacatagaacgtaaac
cattcttttgattccagacctatggatttgaagggccgtagagaggaaat
gtactcatacgttggatctatgtctacatggaagtatcttaagcacttac
cacctattacagggcccatagtggaactctg
gaattcatttacaaaacaagaactgtacatatcacccagcatgccatggg
caccattataaacaagcaggataagggaagattcttgtaaagagagatga
tctaagaactgagcctattaagcactctaggagacagcccccttaaacag
gtgatgggaaatgatcaggaaaacaaaacaaaacaaaacccacaaaatag
ctgaagcaccactgctctaccaagagaaatacactgtataagaacaaaca
gaaaggttaggtgctaaagcccatggcctataaacttaagacttaagtgt
acaaagagaaataaagggacatagactgtaaaatgtttttcttaaaagca
aattgcttaaaatttagtatataaattattaaataaaatcattgaaatta
ttatattacttagggctggagaaatggctcagctgttgacagcattggct
gctcttccagagaagccaggtttgttgcctagcacccacatggcagctca
cagctatctaaatcaccagttccaggagaatctgacaccctcatagaaac
acacattcaggcaaaacactgttgcctataaagttaaataatcttttaaa
aactgaaacaaagaaacttctatttctttatatacctcatacatacctta
tgtccaaatctgaagccttctgtcttactgccaattttgtaatctctcct
tgagacatagccttatggagctttgcttgctcatcaactgaagaaaatcg
ttgtgatgtctgtaggaattacacatggcaaaggcttaaaatcaggtaaa
tatatgatagcatgactgacttacaacttagtaatcatcagttcacaatt
cctggccattcagcaagtatctcatcacgaagtcagggaaacagtcaaga
ccattcacaaactcaaagatccaaatctgagaatacacacactgattagt
atgtctgtatctctctctattttttttggtcctgagtatctttatgggtt
atgatatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_59732019_59733045
seq2: B6Ng01-064F07.g_69_1078 (reverse)

seq1  AAAATAATCTATAACCCATAAAAAGAATAACCTCAAGGAACCAAAAAAAA  50
      ||||| ||| |||||||||||| | |     ||||  | |||||||||||
seq2  AAAAT-ATC-ATAACCCATAAAGATA-----CTCA--GGACCAAAAAAAA  41

seq1  ATAAGAGAGAGATACAGAACATACTAATCAGTGTTGTGTTATTTCTCAGA  100
         |||||||||||||| ||||||||||||||| |||||   ||||||||
seq2  --TAGAGAGAGATACAG-ACATACTAATCAGTG-TGTGT--ATTCTCAGA  85

seq1  TTTGGATTCTTTTGAGTTTGTGAATGGTCTTGACTGTTTCCCTGACTTCC  150
      |||||||   ||||||||||||||||||||||||||||||||||||||| 
seq2  TTTGGAT--CTTTGAGTTTGTGAATGGTCTTGACTGTTTCCCTGACTTCG  133

seq1  TGATGAGATACTTGCTGAATTGCCAGGAATTGTGAACTGATGATTACTAA  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGATGAGATACTTGCTGAATGGCCAGGAATTGTGAACTGATGATTACTAA  183

seq1  GTTGTAAGTCAGTCATGCTATCATATATTTACCTGATTTTAAGCCTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAAGTCAGTCATGCTATCATATATTTACCTGATTTTAAGCCTTTGC  233

seq1  CATGTGTAATTCCTACAGACATCACAACGATTTTCTTCAGTTGATGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTAATTCCTACAGACATCACAACGATTTTCTTCAGTTGATGAGCA  283

seq1  AGCAAAGCTCCATAAGGCTATGTCTCAAGGAGAGATTACAAAATTGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGCTCCATAAGGCTATGTCTCAAGGAGAGATTACAAAATTGGCAG  333

seq1  TAAGACAGAAGGCTTCAGATTTGGACATAAGGTATGTATGAGGTATATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGAAGGCTTCAGATTTGGACATAAGGTATGTATGAGGTATATAA  383

seq1  AGAAATAGAAGTTTCTTTGTTTCAGTTTTTAAAAGATTATTTAACTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGAAGTTTCTTTGTTTCAGTTTTTAAAAGATTATTTAACTTTAT  433

seq1  AGGCAACAGTGTTTTGCCTGAATGTGTGTTTCTATGAGGGTGTCAGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACAGTGTTTTGCCTGAATGTGTGTTTCTATGAGGGTGTCAGATTC  483

seq1  TCCTGGAACTGGTGATTTAGATAGCTGTGAGCTGCCATGTGGGTGCTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTGGTGATTTAGATAGCTGTGAGCTGCCATGTGGGTGCTAGG  533

seq1  CAACAAACCTGGCTTCTCTGGAAGAGCAGCCAATGCTGTCAACAGCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACCTGGCTTCTCTGGAAGAGCAGCCAATGCTGTCAACAGCTGAG  583

seq1  CCATTTCTCCAGCCCTAAGTAATATAATAATTTCAATGATTTTATTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTCCAGCCCTAAGTAATATAATAATTTCAATGATTTTATTTAAT  633

seq1  AATTTATATACTAAATTTTAAGCAATTTGCTTTTAAGAAAAACATTTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATATACTAAATTTTAAGCAATTTGCTTTTAAGAAAAACATTTTAC  683

seq1  AGTCTATGTCCCTTTATTTCTCTTTGTACACTTAAGTCTTAAGTTTATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATGTCCCTTTATTTCTCTTTGTACACTTAAGTCTTAAGTTTATAG  733

seq1  GCCATGGGCTTTAGCACCTAACCTTTCTGTTTGTTCTTATACAGTGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGGCTTTAGCACCTAACCTTTCTGTTTGTTCTTATACAGTGTATT  783

seq1  TCTCTTGGTAGAGCAGTGGTGCTTCAGCTATTTTGTGGGTTTTGTTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGTAGAGCAGTGGTGCTTCAGCTATTTTGTGGGTTTTGTTTTGT  833

seq1  TTTGTTTTCCTGATCATTTCCCATCACCTGTTTAAGGGGGCTGTCTCCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTCCTGATCATTTCCCATCACCTGTTTAAGGGGGCTGTCTCCTA  883

seq1  GAGTGCTTAATAGGCTCAGTTCTTAGATCATCTCTCTTTACAAGAATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTTAATAGGCTCAGTTCTTAGATCATCTCTCTTTACAAGAATCTT  933

seq1  CCCTTATCCTGCTTGTTTATAATGGTGCCCATGGCATGCTGGGTGATATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATCCTGCTTGTTTATAATGGTGCCCATGGCATGCTGGGTGATATG  983

seq1  TACAGTTCTTGTTTTGTAAATGAATTC  1027
      |||||||||||||||||||||||||||
seq2  TACAGTTCTTGTTTTGTAAATGAATTC  1010