BAC Information

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BAC

Clone NameB6Ng01-066L10
Chromosome9 (Build37)
Map Location 78,173,536 - 78,174,004
singlet/doubletsinglet
Overlap genenone
Upstream gene2310046A06Rik, 5730403I07Rik, Lrrc1, Klhl31, Gclc, LOC100042212, Elovl5, Gcm1, LOC666353, Fbxo9, Ick, C920006O11Rik, Gsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383
Downstream geneOmt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066L10.bB6Ng01-066L10.g
ACCDH885817DH885818
length842986
definitionDH885817|Mus musculus domesticus DNA, BAC clone: B6Ng01-066L10, 5' end.DH885818|Mus musculus domesticus DNA, BAC clone: B6Ng01-066L10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgttgtctttttcttacctaatcttttaaaggtcatgaacca
gaacacccagttttaatttaattttgagtgaattttaattttagtatgtg
tgagttcttgcgttggttccccagcacagagagtgagacttaaaggaagg
aggccaagcaaggagacaaaagagtaagaagaagagaaaatacacatcat
aattctcccagctcagtgggagagctgttagctaccagtgtagctcactg
agcatggtcgctccttttataatcagcctatgcagtgaagaccacagcct
gttaactgattagtagtcagaagaatggactggagacctcagtagaacag
cttaaaagatccctagatcaccatctgtgagggtttcttttttttttttt
ccatttttttattaggtatttagcacatttacatttccaatgctatacca
aaagtcccccatacccacccacccccactcccctacccgcccactccccc
tttttggccctggcgttcccctgtactggggcatataaagtttgcgtgtc
caatgggtctctctttccagtgatggccgactaggccatctttttgatac
atatgcagctagagtcaagagctccggggtactggttagttcataatgtt
gttccacctataaggttgaagatccctttagctccttgggtacttttctc
tagctcctccattgggagccctgtgatccatccattagctgactgtgagc
atccacttctgtgtttgcaagagacagctacatctgggtcctttcaataa
aacttgctatgtatgcaaaggtgtcatcgtttgggtgctgat
gaattctcgatttagttctataccccattttttgattgggttgtttgatt
ttatggtgattaacttcttgagttcttcatatattttggatattagccct
ctatcagaagtggggttagtgaagatttttttcccaatctgtaggttgcc
gatttgtctcgttgattatgtccttttcttacagaagctttccaatttca
tgaggtcctatttatcagttcttgatcttagagcttgagccattggagtt
ctgtttaggatattttccccctctgtcaatgaattcaaggctctttccca
cattctcttctattagattcagtgtatctggttttatattgaggtccttt
atctatttggattgaacttggtacaaagtgacaaatatgggtctattttc
attcttctacatacagacagccagatagaccagcaccatttattgaagat
gctttcttttttccattgtatatttttgtcctctttgtcaaaggtcaagc
gaccaaaagtgtgtggttttttggggggttattcagttctgttccattga
tcaatgtgtctatcactgtaccaataccatgcagtttttatcactagtgc
tctgtagtaaagcttgagatcagggatggtgattccccagctttcctttt
attgttaaaatctctttttgctattctgggttttttgcttttctagatga
ctttgagaattgctctttccatgtctttgaagaattctgttgggattttg
ataaggattgcattgaatctatagattgcctttggtaggatgaccatttt
tactatgttaattctgtcatccatgagcatgagagatctttccatcttct
tgagatcttctttgattctttcttcagagacttggagttatgtcatacag
atcttcactaatttgggtagagttacccaagatatttttattattggtgg
ctatatgaagagagtgtttccctaatttcttcacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_78173536_78174004
seq2: B6Ng01-066L10.b_442_890 (reverse)

seq1  ATCAGCATCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTATTG  50
      ||||||| ||||||| ||||||| ||||||||| ||||||| ||||||||
seq2  ATCAGCACCCAAACGATGACACCTTTGCATACA-TAGCAAG-TTTTATTG  48

seq1  AAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCA  100
      ||||||||||||||||||||||||||                     |||
seq2  AAAGGACCCAGATGTAGCTGTCTCTT---------------------GCA  77

seq1  AACACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCATAGGGCTC  150
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCACAGGGCTC  127

seq1  CCAATGGAGGAGCTAGAG-AAAGTAGCCAAGGAGCTAAAGGGATCTGCAA  199
      |||||||||||||||||| |||||| |||||||||||||||||||| |||
seq2  CCAATGGAGGAGCTAGAGAAAAGTACCCAAGGAGCTAAAGGGATCTTCAA  177

seq1  CCCTATAGGTGGAACAACATTATGAAATAACCAGTACCCCGGAGCTCTTG  249
      || ||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTG  227

seq1  ACTCTAGCTGCATATATATC-AAAAGATGGCCTAGTCGGCCATCACTGGA  298
      ||||||||||||||| |||| |||||||||||||||||||||||||||||
seq2  ACTCTAGCTGCATATGTATCAAAAAGATGGCCTAGTCGGCCATCACTGGA  277

seq1  AAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAA  348
      ||||||| ||||||||||  ||||||||||||||||||||||||||||||
seq2  AAGAGAGACCCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAA  327

seq1  CACCAGGGCCAAAAAGGGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTG  398
      | |||||||||||||||||||||||| ||| |||||||||||||||||||
seq2  CGCCAGGGCCAAAAAGGGGGAGTGGGCGGGTAGGGGAGTGGGGGTGGGTG  377

seq1  GATATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATAC  448
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGTGCTAAATAC  427

seq1  CTAAT-AAAAAATGGAAAAAAA  469
      ||||| ||||||||||||||||
seq2  CTAATAAAAAAATGGAAAAAAA  449